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1. Full Text Bayesian characterization of uncertainty in species interaction strengths
by Wolf, Christopher and Novak, Mark and Gitelman, Alix I
Oecologia, ISSN 0029-8549, 06/2017, Volume 184, Issue 2, pp. 327 - 339
Considerable effort has been devoted to the estimation of species interaction strengths. This effort has focused primarily on statistical significance testing... 
Type II functional response | Parameter estimation | Non-informative neutral priors | Allometric scaling | Stochastic and deterministic variation | CAPITA INTERACTION STRENGTH | STABILITY | PREDICTION | ABUNDANCE | DISTRIBUTIONS | PREY | MODELS | FOOD WEBS | BODY-MASS | ECOLOGY | New Zealand | Food Chain | Uncertainty | Models, Statistical | Bayes Theorem | Interaction parameters | Methodology | Food webs | Case studies | Confidence intervals | Predators | Parameter uncertainty | Webs | Evolution | Ecological monitoring | Mathematical models | Modelling | Species | Framework | Food | Predator prey interactions | Probability theory | Estimation | Ecology | Probabilistic methods | Observational method | Estimates | Interspecific relationships | Feeding | Prey | Surveys | Lower bounds | Stochasticity | Predation | Bayesian analysis | Strength
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2. Full Text Linking multidimensional functional diversity to quantitative methods: a graphical hypothesis-evaluation framework
by Kate S. Boersma and Laura E. Dee and Steve J. Miller and Michael T. Bogan and David A. Lytle and Alix I. Gitelman
Ecology, ISSN 0012-9658, 3/2016, Volume 97, Issue 3, pp. 583 - 593
Functional trait analysis is an appealing approach to study differences among biological communities because traits determine species' responses to the... 
CONCEPTS & SYNTHESIS: EMPHASIZING NEW IDEAS TO STIMULATE RESEARCH IN ECOLOGY | disturbance | functional diversity | ordination | trait‐based ecology | multidimensional trait space | multivariate analysis | community assembly | Trait-based ecology | Ordination | Disturbance | Community assembly | Multidimensional trait space | Multivariate analysis | Functional diversity | ASSEMBLAGES | REDUNDANCY | PREDICTION | RESPONSES | MODELS | PERSPECTIVES | SPECIES RICHNESS | CONVERGENCE | ECOLOGY | COMMUNITY TRAJECTORIES | DIVERGENCE | trait-based ecology | Invertebrates - classification | Animals | Droughts | Models, Biological | Invertebrates - physiology | Conservation of Natural Resources | Rivers | Biodiversity | Biotic communities | Ecosystem components | Research | Ecological research
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3. Full Text Use of Aliphatic n-Alkynes To Discriminate Soil Nitrification Activities of Ammonia-Oxidizing Thaumarchaea and Bacteria
by Anne E. Taylor and Neeraja Vajrala and Andrew T. Giguere and Alix I. Gitelman and Daniel J. Arp and David D. Myrold and Luis Sayavedra-Soto and Peter J. Bottomley
Applied and Environmental Microbiology, ISSN 0099-2240, 11/2013, Volume 79, Issue 21, pp. 6544 - 6551
Classifications Services AEM Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley Reddit... 
METHANE MONO-OXYGENASE | NITROSOSPHAERA-VIENNENSIS | OXIDATION-KINETICS | ALKENES | COMPLETE GENOME SEQUENCE | ARCHAEA | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | NITROSOMONAS-EUROPAEA | MICROBIOLOGY | METHYLOSINUS-TRICHOSPORIUM OB3B | STRAIN CF8 | MONOOXYGENASE | Nitrification - physiology | Oxidation-Reduction | Species Specificity | Ammonia - metabolism | Soil Microbiology | Betaproteobacteria - metabolism | Linear Models | Archaea - drug effects | Betaproteobacteria - drug effects | Archaea - metabolism | Analysis of Variance | Alkynes - metabolism | Alkynes - pharmacology | Physiological aspects | Environmental aspects | Soils | Nitrogen content | Thaumarchaeota | Research | Environmental Microbiology
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4. Full Text Quantifying partial migration with sex-ratio balancing
by Ohms, Haley A and Jordan, Chris E and Lytle, Dave A and Gitelman, Alix I
Canadian Journal of Zoology, ISSN 0008-4301, 2019, Volume 97, Issue 4, pp. 352 - 361
Partial migration, the phenomenon in which animal populations are composed of both migratory and nonmigratory individuals, is widespread among migrating... 
Oncorhynchus tshawytscha | diversité des cycles biologiques | female-biased migration | rapport de masculinité | sex-ratio balancing | équilibrage du rapport de masculinité | migration biaisée en faveur des femelles | Chinook salmon | partial migration | life-history diversity | sex ratio | migration partielle | saumon chinook | SEASONAL MIGRATION | LIFE-HISTORY STRATEGIES | FRESH-WATER | ZOOLOGY | INDIVIDUAL CONDITION | CHAR SALVELINUS-ALPINUS | REPRODUCTIVE SUCCESS | POPULATION-DYNAMICS | ATLANTIC SALMON | ALTITUDINAL MIGRATION | LATITUDINAL VARIATION | Analysis | Population biology | Animal migration | Ecosystems | Population genetics | Fishes | Ecosystem dynamics | Balancing | Populations | Salmon | Migration | Biological evolution | Zoology | Sex | Environmental changes | Animal populations | Estimates | Sex ratio | Studies | Ratios | Migrants | Residential density | Genetics | Fish | Estimating techniques | Bayesian analysis
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5. Full Text Carryover Aquatic Effects on Survival of Metamorphic Frogs during Pond Emigration
by Nathan D. Chelgren and Daniel K. Rosenberg and Selina S. Heppell and Alix I. Gitelman
Ecological Applications, ISSN 1051-0761, 2/2006, Volume 16, Issue 1, pp. 250 - 261
In organisms with complex life cycles, physiological stressors during early life stages may have fitness-level impacts that are delayed into later stages or... 
Frogs | Conservation biology | Larvae | Fences | Marine ecology | Ponds | Body size | Amphibians | Metamorphosis | Metapopulation ecology | post-metamorphosis | delayed effects | Rana aurora aurora | emigration | survival | body size | individual variation | Bayesian analysis | movement | Movement | Delayed effects | Individual variation | Emigration | Survival | Post-metamorphosis | RANA-SYLVATICA | BUFO-TERRESTRIS | CHASMAGNATHUS-GRANULATA | COMPLEX LIFE-CYCLES | INTRODUCED BULLFROGS | AMPHIBIAN POPULATION DECLINES | MOVEMENT PATTERNS | ECOLOGY | RED-LEGGED FROGS | AMBYSTOMA-TALPOIDEUM | SENSITIVITY ANALYSIS | Emigration and Immigration - statistics & numerical data | Metamorphosis, Biological - physiology | Animals | Age Factors | Time Factors | Body Size | Survival Analysis | Environment | Water Supply | Anura - physiology | Life Cycle Stages - physiology | Population Dynamics
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6. Full Text Simultaneous tests for homogeneity of two zero-inflated (beta) populations
by Sun, Luna and Gitelman, Alix I
Communications in Statistics - Theory and Methods, ISSN 0361-0926, 09/2016, Volume 45, Issue 17, pp. 5137 - 5153
Motivated by an example in marine science, we use Fisher's method to combine independent likelihood ratio tests (LRTs) and asymptotic independent score tests... 
Score test | Permutation test | Simultaneous comparisons | Likelihood ratio test | Zero-inflated Beta | 62F03 | Fisher's method | Fisher’s method | COUNT DATA | STATISTICS & PROBABILITY | MODELS | FISHERS METHOD | EQUALITY | COMBINING INDEPENDENT TESTS | ASYMPTOTIC OPTIMALITY | Statistics | Beta | Parameters | Inflation | Populations | Statistical methods | Computational efficiency | Statistical tests | Asymptotic methods
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7. Linking multidimensional functional diversity to quantitative methods: a graphical hypothesis-evaluation framework
by Kate S Boersma and Laura E Dee and Steve J Miller and Michael T Bogan and David A Lytle and Alix I Gitelman
Ecology, ISSN 0012-9658, 03/2016, Volume 97, Issue 3, p. 583
  Functional trait analysis is an appealing approach to study differences among biological communities because traits determine species' responses to the... 
Ecology | Biological diversity
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8. Full Text Designing a monitoring program to estimate estuarine survival of anadromous salmon smolts: Simulating the effect of sample design on inference
by Romer, Jeremy D and Gitelman, Alix I and Clements, Shaun and Schreck, Carl B
PLoS ONE, ISSN 1932-6203, 07/2015, Volume 10, Issue 7, p. e0132912
A number of researchers have attempted to estimate salmonid smolt survival during outmigration through an estuary. However, it is currently unclear how the... 
COLUMBIA RIVER | CHINOOK SALMON | MIGRATION | STEELHEAD SMOLTS | CONSERVATION | PACIFIC SALMON | JUVENILE SALMONIDS | BRITISH-COLUMBIA | BEHAVIOR | OREGON | MULTIDISCIPLINARY SCIENCES | Conservation of Natural Resources - methods | Estuaries | Probability | Rivers | Telemetry | Life Cycle Stages | Algorithms | Animals | Computer Simulation | Ecosystem | Animal Migration | Seasons | Research Design | Salmon - physiology | Fishes | Migration | Variations | Acoustics | Research | Creeks & streams | Restoration | Data recovery | Life cycle engineering | Fish | Population | Sampling | Monitoring | Coasts | Computer simulation | Biotelemetry | Salmon | Trout | Sampling designs | Marking | Estimates | Long term | Survival | Studies | Missing data | Simulation | Tagging | Variation | Recovery plans | Cell migration | Life cycles
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9. Use of Aliphatic n-Alkynes To Discriminate Soil Nitrification Activities of Ammonia-Oxidizing Thaumarchaea and Bacteria
by Anne E Taylor and Neeraja Vajrala and Andrew T Giguere and Alix I Gitelman and Daniel J Arp and David D Myrold and Luis Sayavedra-Soto and Peter J Bottomley
Applied and Environmental Microbiology, ISSN 0099-2240, 11/2013, Volume 79, Issue 21, p. 6544
  Ammonia (...)-oxidizing bacteria (AOB) and thaumarchaea (AOA) co-occupy most soils, yet no short-term growth-independent method exists to determine their... 
Ammonia | Bacterial proteins | Protein synthesis | Nitrification | Bacteria | Oxidation
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10. Full Text Graphical spatial models: a new view on interpreting spatial pattern
by Irvine, Kathryn M and Irvine, Kathryn M and Gitelman, Alix I and Gitelman, Alix I
Environmental and Ecological Statistics, ISSN 1352-8505, 9/2011, Volume 18, Issue 3, pp. 447 - 469
Graphical models provide an important tool for facilitating communication between scientists, decision-makers, and statisticians—many complicated ecological... 
Life Sciences | Multi-scale analysis | Mathematical and Computational Biology | Isomorphic chain graphs | Spatial correlation | Ecology | Spatial path analysis | Statistics, general | Evolutionary Biology | Multivariate | CHAIN GRAPHS | MANAGEMENT | MULTISCALE ANALYSIS | LANDSCAPE | AUTOCORRELATION | STATISTICS & PROBABILITY | PREDICTION | ENVIRONMENTAL SCIENCES | MATHEMATICS, INTERDISCIPLINARY APPLICATIONS | PATH-ANALYSIS | LAND-USE | ECOLOGY | SCIENCE | Studies | Riparian ecology | Riparian buffers | Models
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11. Full Text The effects of taurolidine alone and in combination with doxorubicin or carboplatin in canine osteosarcoma in vitro
by Marley, Kevin and Helfand, Stuart C and Edris, Wade A and Mata, John E and Gitelman, Alix I and Medlock, Jan and Séguin, Bernard
BMC Veterinary Research, ISSN 1746-6148, 01/2013, Volume 9, Issue 1, pp. 15 - 15
Background: Osteosarcoma (OS) affects over 8000 dogs/year in the United States. The disease usually arises in the appendicular skeleton and metastasizes to the... 
Carboplatin | Osteosarcoma | Doxorubicin | In vitro | Taurolidine | Apoptosis | NUDE-MICE | VIVO | ANTINEOPLASTIC AGENT | CANCER | CELL-DEATH | GLIOBLASTOMA | MELANOMA | PHARMACOKINETICS | GROWTH | VETERINARY SCIENCES | Osteosarcoma - drug therapy | Doxorubicin - therapeutic use | Taurine - analogs & derivatives | Thiadiazines - administration & dosage | Humans | Carboplatin - administration & dosage | Antineoplastic Agents - therapeutic use | Antineoplastic Agents - administration & dosage | Thiadiazines - therapeutic use | Osteosarcoma - veterinary | Dose-Response Relationship, Drug | Animals | Dog Diseases - drug therapy | Carboplatin - therapeutic use | Dogs | Cell Line, Tumor | Taurine - administration & dosage | Bone Neoplasms - drug therapy | Drug Therapy, Combination | In Vitro Techniques | Taurine - therapeutic use | Bone Neoplasms - veterinary | Doxorubicin - administration & dosage | Taurine | Care and treatment | Anthracyclines | Adjuvant treatment | Diseases | Cell death | Analysis | Tumor proteins | Drug therapy | Cancer | Proteins | Flow cytometry | Health sciences | Hypotheses | Cytotoxicity | Design of experiments | Cell adhesion & migration | Index Medicus
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12. Full Text Spatial Designs and Properties of Spatial Correlation: Effects on Covariance Estimation
by Kathryn M. Irvine and Alix I. Gitelman and Jennifer A. Hoeting
Journal of Agricultural, Biological, and Environmental Statistics, ISSN 1085-7117, 12/2007, Volume 12, Issue 4, pp. 450 - 469
In a spatial regression context, scientists are often interested in a physical interpretation of components of the parametric covariance function. For example,... 
Maximum likelihood estimation | Covariance | Sample size | Range errors | Mathematical independent variables | Sulfates | Autocorrelation | Spatial models | Streams | Estimation methods | Effective range | In-fill asymptotics | Nugget-tosill ratio | Exponential covariance
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13. Full Text Estimating Causal Effects from Multilevel Group-Allocation Data
by Alix I. Gitelman
Journal of Educational and Behavioral Statistics, ISSN 1076-9986, 12/2005, Volume 30, Issue 4, pp. 397 - 412
In group-allocation studies for comparing behavioral, social, or educational interventions, subjects in the same group necessarily receive the same treatment,... 
Outcomes of education | Contrafactuals | Health outcomes | Social interaction | Multilevel models | Inference | Health education | Causality | Peer relations | Intervention studies | Causal modeling | Group allocation | Group dynamic | EDUCATION & EDUCATIONAL RESEARCH | TRIALS | group allocation | RANDOMIZATION | MODELS | group dynamic | SOCIAL SCIENCES, MATHEMATICAL METHODS | causal modeling | multilevel models | INFERENCE | Intervention | Causal Models | Outcomes of Treatment | Attribution Theory | Group Membership | Computation | Group Dynamics | Health Education | Program Effectiveness | Multilevel analysis | Behavioral assessment | Methods | Comparative studies | Allocations | Cause & effect diagrams | Behavioral sciences | Groups
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14. Full Text Use of a Smoother to Forecast Occurrence of Epiphytic Lichens under Alternative Forest Management Plans
by Bruce McCune and Shanti D. Berryman and John H. Cissel and Alix I. Gitelman
Ecological Applications, ISSN 1051-0761, 8/2003, Volume 13, Issue 4, pp. 1110 - 1123
We used habitat models to forecast the frequency of occurrence of epiphytic lichen species in a forested landscape under two alternative plans: a literal... 
Old growth forests | Logistic regression | Lichens | Landscapes | Ecological modeling | Forest habitats | Riparian forests | Species | Modeling | Green tree retention | forest planning | ecological neighborhood model | nonparametric smoothing | riparian forests | lichens | Pacific Northwest (USA) | Lobaria oregana | habitat model | epiphytes | Northwest Forest Plan | Ecological neighborhood model | Nonparametric smoothing | Forest planning | Epiphytes | Habitat model | DOUGLAS-FIR FOREST | COMMUNITIES | GRADIENT | ENVIRONMENTAL SCIENCES | WESTERN OREGON | INTERIOR | BIOMASS | SWAN VALLEY | OLD-GROWTH | ECOLOGY | DIVERSITY | EDGE
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15. Linking multidimensional functional diversity to quantitative methods: a graphical hypothesis-evaluation framework
by Boersma, Kate S and Dee, Laura E and Miller, Steve J and Bogan, Michael T and Lytle, David A and Gitelman, Alix I
Ecology, ISSN 0012-9658, 03/2016, Volume 97, Issue 3, pp. 583 - 583
Functional trait analysis is an appealing approach to study differences among biological communities because traits determine species' responses to the... 
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16. Individual variation affects departure rate from the natal pond in an ephemeral pond-breeding anuran
by Nathan D Chelgren and Daniel K Rosenberg and Selina S Heppell and Alix I Gitelman
Canadian Journal of Zoology, ISSN 1480-3283, 04/2008, Volume 86, Issue 4, p. 260
  Frogs exhibit extreme plasticity and individual variation in growth and behavior during metamorphosis, driven by interactions of intrinsic state factors and... 
Frogs | Studies | Animal reproduction | Ponds | Zoology | Models
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17. Full Text Linking multidimensional functional diversity to quantitative methods: A graphical hypothesis-evaluation framework
by Boersma, Kate S and Dee, Laura E and Miller, Steve J and Bogan, Michael Thomas and Lytle, David A and Gitelman, Alix I
Ecology, ISSN 0012-9658, 10/2015
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18. Full Text Isomorphic chain graphs for modeling spatial dependence in ecological data
by Gitelman, Alix I and Herlihy, Alan
Environmental and Ecological Statistics, ISSN 1352-8505, 3/2007, Volume 14, Issue 1, pp. 27 - 40
Graphical models (alternatively, Bayesian belief networks, path analysis models) are increasingly used for modeling complex ecological systems (e.g., Lee, In:... 
Life Sciences | Graphical model | Spatial correlation | Mathematical Biology in General | Ecology | Statistics, general | Evolutionary Biology | Bayesian belief network | ENVIRONMENTAL SCIENCES | NETWORK | MATHEMATICS, INTERDISCIPLINARY APPLICATIONS | graphical model | STATISTICS & PROBABILITY | spatial correlation | Studies
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19. Full Text Predicting timing of downy brome (Bromus tectorum) seed production using growing degree days
by Daniel A. Ball and Sandra M. Frost and Alix I. Gitelman
Weed Science, ISSN 0043-1745, 2004, Volume 52, Issue 4, pp. 518 - 524
Abstract Downy brome in dryland winter wheat presents a major constraint to the adoption of reduced tillage cropping systems in the Pacific Northwest of the... 
cheatgrass | modeling | Seed development | growing degree days | Seed set | Seeds | Seed production | Vernalization | Panicles | Tillage | Fallowing | Weed Biology and Ecology | Lacrosse | Wheat | Geodetic position | Cheatgrass | Growing degree days | Modeling | WHEAT TRITICUM-AESTIVUM | AGRONOMY | ROOT | TILLAGE | JOINTED GOATGRASS | WINTER-WHEAT | PLANT SCIENCES | CEREAL-GRAINS | TEMPERATURE | BARLEY | seed development | VERNALIZATION | SHOOT DEVELOPMENT
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