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Methods in molecular biology (Clifton, N.J.), 2012, Volume 855, pp. 259 - 175
The distinction between orthologs and paralogs, genes that started diverging by speciation versus duplication, is relevant in a wide range of contexts, most... 
Computational Biology - methods | Animals | Phylogeny | Humans | Evolution, Molecular
Journal Article
PLoS Computational Biology, ISSN 1553-734X, 01/2009, Volume 5, Issue 1, pp. e1000262 - e1000262
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 01/2011, Volume 39, Issue 1, pp. D289 - D294
OMA (Orthologous MAtrix) is a database that identifies orthologs among publicly available, complete genomes. Initiated in 2004, the project is at its 11th... 
BROWSER | NATIONAL-CENTER | IDENTIFICATION | DATABASE RESOURCES | BIOCHEMISTRY & MOLECULAR BIOLOGY | BIOTECHNOLOGY-INFORMATION | User-Computer Interface | Algorithms | Alternative Splicing | Genes | Databases, Genetic | Phylogeny | Genome | Evolution, Molecular | Index Medicus
Journal Article
PLoS ONE, ISSN 1932-6203, 01/2013, Volume 8, Issue 1, pp. e53786 - e53786
Journal Article
PLoS Computational Biology, ISSN 1553-734X, 01/2009, Volume 5, Issue 1
  Accurate genome-wide identification of orthologs is a central problem in comparative genomics, a fact reflected by the numerous orthology identification... 
Trees | Studies | Genomics | Phylogenetics | Methods
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 01/2018, Volume 46, Issue D1, pp. D477 - D485
Abstract The Orthologous Matrix (OMA) is a leading resource to relate genes across many species from all of life. In this update paper, we review the recent... 
FRAMEWORK | UPDATE | PHYLOGENETIC TREES | BIOCHEMISTRY & MOLECULAR BIOLOGY | FUNCTIONAL ANNOTATIONS | SEQUENCE | Database Issue
Journal Article
Nature Methods, ISSN 1548-7091, 05/2016, Volume 13, Issue 5, pp. 425 - 430
Journal Article
GENOME RESEARCH, ISSN 1088-9051, 07/2019, Volume 29, Issue 7, pp. 1152 - 1163
Genomes and transcriptomes are now typically sequenced by individual laboratories but analyzing them often remains challenging. One essential step in many... 
PHYLOGENY | EVOLUTIONARY RELATIONSHIPS | RECONSTRUCTION | BIOCHEMISTRY & MOLECULAR BIOLOGY | IDENTIFICATION | DATABASE | GENE | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | SEQUENCE | GENETICS & HEREDITY | TREE | FUNCTIONAL ANNOTATIONS | QUEST | Method
Journal Article
Nucleic acids research, 01/2018, Volume 46, Issue D1, p. D477
The Orthologous Matrix (OMA) is a leading resource to relate genes across many species from all of life. In this update paper, we review the recent algorithmic... 
Journal Article
Journal of Computational Physics, ISSN 0021-9991, 2007, Volume 225, Issue 1, pp. 1125 - 1136
Journal Article