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by Yue, Feng and Cheng, Yong and Breschi, Alessandra and Vierstra, Jeff and Wu, Weisheng and Ryba, Tyrone and Sandstrom, Richard and Ma, Zhihai and Davis, Carrie and Pope, Benjamin D and Shen, Yin and Pervouchine, Dmitri D and Djebali, Sarah and Thurman, Robert E and Kaul, Rajinder and Rynes, Eric and Kirilusha, Anthony and Marinov, Georgi K and Williams, Brian A and Trout, Diane and Amrhein, Henry and Fisher-Aylor, Katherine and Antoshechkin, Igor and DeSalvo, Gilberto and See, Lei-Hoon and Fastuca, Meagan and Drenkow, Jorg and Zaleski, Chris and Dobin, Alex and Prieto, Pablo and Lagarde, Julien and Bussotti, Giovanni and Tanzer, Andrea and Denas, Olgert and Li, Kanwei and Bender, M.A and Zhang, Miaohua and Byron, Rachel and Groudine, Mark T and McCleary, David and Pham, Long and Ye, Zhen and Kuan, Samantha and Edsall, Lee and Wu, Yi-Chieh and Rasmussen, Matthew D and Bansal, Mukul S and Kellis, Manolis and Keller, Cheryl A and Morrissey, Christapher S and Mishra, Tejaswini and Jain, Deepti and Dogan, Nergiz and Harris, Robert S and Cayting, Philip and Kawli, Trupti and Boyle, Alan P and Euskirchen, Ghia and Kundaje, Anshul and Lin, Shin and Lin, Yiing and Jansen, Camden and Malladi, Venkat S and Cline, Melissa S and Erickson, Drew T and Kirkup, Vanessa M and Learned, Katrina and Sloan, Cricket A and Rosenbloom, Kate R and De Sousa, Beatriz Lacerda and Beal, Kathryn and Pignatelli, Miguel and Flicek, Paul and Lian, Jin and Kahveci, Tamer and Lee, Dongwon and Kent, W. James and Santos, Miguel Ramalho and Herrero, Javier and Notredame, Cedric and Johnson, Audra and Vong, Shinny and Lee, Kristen and Bates, Daniel and Neri, Fidencio and Diegel, Morgan and Canfield, Theresa and Sabo, Peter J and Wilken, Matthew S and Reh, Thomas A and Giste, Erika and Shafer, Anthony and Kutyavin, Tanya and Haugen, Eric and Dunn, Douglas and Reynolds, Alex P and Neph, Shane and Humbert, Richard and Hansen, R. Scott and De Bruijn, Marella and ... and Mouse ENCODE Consortium and The Mouse ENCODE Consortium
Nature, ISSN 0028-0836, 11/2014, Volume 515, Issue 7527, pp. 355 - 364
Journal Article
Developmental Cell, ISSN 1534-5807, 12/2018, Volume 47, Issue 6, pp. 773 - 784.e6
Rapid mitotic divisions and a fixed transcription rate limit the maximal length of transcripts in early embryos. Previous studies suggested that transcription... 
TGF-ß signaling | truncated transcripts | short-gastrulation | cell signaling | cellularization | embryo | Sex-lethal | short nuclear cycles | Drosophila melanogaster | gene expression | TARGET GENES | ACTIVATION | PROTEIN | NUCLEAR | BMP | SEX DETERMINATION SIGNAL | GENE-EXPRESSION | POLYADENYLATION | DEVELOPMENTAL BIOLOGY | MITOTIC-CYCLES | DROSOPHILA EMBRYOS | CELL BIOLOGY
Journal Article
by Dunham, Ian and Kundaje, Anshul and Aldred, Shelley F and Collins, Patrick J and Davis, Carrie A and Doyle, Francis and Epstein, Charles B and Frietze, Seth and Harrow, Jennifer and Kaul, Rajinder and Khatun, Jainab and Lajoie, Bryan R and Landt, Stephen G and Lee, Bum-Kyu and Pauli, Florencia and Rosenbloom, Kate R and Sabo, Peter and Safi, Alexias and Sanyal, Amartya and Shoresh, Noam and Simon, Jeremy M and Song, Lingyun and Trinklein, Nathan D and Altshuler, Robert C and Birney, Ewan and Brown, James B and Cheng, Chao and Djebali, Sarah and Dong, Xianjun and Ernst, Jason and Furey, Terrence S and Gerstein, Mark and Giardine, Belinda and Greven, Melissa and Hardison, Ross C and Harris, Robert S and Herrero, Javier and Hoffman, Michael M and Iyer, Sowmya and Kellis, Manolis and Kheradpour, Pouya and Lassmann, Timo and Li, Qunhua and Lin, Xinying and Marinov, Georgi K and Merkel, Angelika and Mortazavi, Ali and Parker, Stephen C. J and Reddy, Timothy E and Rozowsky, Joel and Schlesinger, Felix and Thurman, Robert E and Wang, Jie and Ward, Lucas D and Whitfield, Troy W and Wilder, Steven P and Wu, Weisheng and Xi, Hualin S and Yip, Kevin Y and Zhuang, Jiali and Bernstein, Bradley E and Green, Eric D and Gunter, Chris and Snyder, Michael and Pazin, Michael J and Lowdon, Rebecca F and Dillon, Laura A. L and Adams, Leslie B and Kelly, Caroline J and Zhang, Julia and Wexler, Judith R and Good, Peter J and Feingold, Elise A and Crawford, Gregory E and Dekker, Job and Elnitski, Laura and Farnham, Peggy J and Giddings, Morgan C and Gingeras, Thomas R and Guigó, Roderic and Hubbard, Timothy J and Kent, W. James and Lieb, Jason D and Margulies, Elliott H and Myers, Richard M and Stamatoyannopoulos, John A and Tenenbaum, Scott A and Weng, Zhiping and White, Kevin P and Wold, Barbara and Yu, Yanbao and Wrobel, John and Risk, Brian A and Gunawardena, Harsha P and Kuiper, Heather C and Maier, Christopher W and Xie, Ling and Chen, Xian and Mikkelsen, Tarjei S and Gillespie, Shawn and ... and ENCODE Project Consortium and The ENCODE Project Consortium
Nature, ISSN 0028-0836, 09/2012, Volume 489, Issue 7414, pp. 57 - 74
Journal Article
by Myers, Richard M and Stamatoyannopoulos, John and Snyder, Michael and Dunham, Ian and Hardison, Ross C and Bernstein, Bradley E and Gingeras, Thomas R and Kent, W. James and Birney, Ewan and Wold, Barbara and Crawford, Gregory E and Epstein, Charles B and Shoresh, Noam and Ernst, Jason and Mikkelsen, Tarjei S and Kheradpour, Pouya and Zhang, Xiaolan and Wang, Li and Issner, Robbyn and Coyne, Michael J and Durham, Timothy and Ku, Manching and Truong, Thanh and Ward, Lucas D and Altshuler, Robert C and Lin, Michael F and Kellis, Manolis and Davis, Carrie A and Kapranov, Philipp and Dobin, Alexander and Zaleski, Christopher and Schlesinger, Felix and Batut, Philippe and Chakrabortty, Sudipto and Jha, Sonali and Lin, Wei and Drenkow, Jorg and Wang, Huaien and Bell, Kim and Bell, Ian and Gao, Hui and Dumais, Erica and Dumais, Jacqueline and Antonarakis, Stylianos E and Ucla, Catherine and Borel, Christelle and Guigo, Roderic and Djebali, Sarah and Lagarde, Julien and Kingswood, Colin and Ribeca, Paolo and Sammeth, Micha and Alioto, Tyler and Merkel, Angelika and Tilgner, Hagen and Carninci, Piero and Hayashizaki, Yoshihide and Lassmann, Timo and Takahashi, Hazuki and Abdelhamid, Rehab F and Hannon, Gregory and Fejes, Katalin-Toth and Preall, Jonathan and Gordon, Assaf and Sotirova, Vihra and Reymond, Alexandre and Howald, Cedric and Graison, Emilie Aït Yahya and Chrast, Jacqueline and Ruan, Yijun and Ruan, Xiaoan and Shahab, Atif and Poh, Wan Ting and Wei, Chia-Lin and Furey, Terrence S and Boyle, Alan P and Sheffield, Nathan C and Song, Lingyun and Shibata, Yoichiro and Vales, Teresa and Winter, Deborah and Zhang, Zhancheng and London, Darin and Wang, Tianyuan and Keefe, Damian and Iyer, Vishwanath R and Lee, Bum-Kyu and McDaniell, Ryan M and Liu, Zheng and Battenhouse, Anna and Bhinge, Akshay A and Lieb, Jason D and Grasfeder, Linda L and Showers, Kimberly A and Giresi, Paul G and Kim, Seul K. C and Shestak, Christopher and Pauli, Florencia and Reddy, Timothy E and Gertz, Jason and ... and ENCODE Project Consortium and The ENCODE Project Consortium
PLoS Biology, ISSN 1544-9173, 04/2011, Volume 9, Issue 4, p. e1001046
Journal Article