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Science, ISSN 0036-8075, 4/2010, Volume 328, Issue 5978, pp. 636 - 639
Journal Article
by Warren, Wesley C and Clayton, David F and Ellegren, Hans and Arnold, Arthur P and Hillier, Ladeana W and Künstner, Axel and Searle, Steve and White, Simon and Vilella, Albert J and Fairley, Susan and Heger, Andreas and Kong, Lesheng and Ponting, Chris P and Jarvis, Erich D and Mello, Claudio V and Minx, Pat and Lovell, Peter and Velho, Tarciso A. F and Ferris, Margaret and Balakrishnan, Christopher N and Sinha, Saurabh and Blatti, Charles and London, Sarah E and Li, Yun and Lin, Ya-Chi and George, Julia and Sweedler, Jonathan and Southey, Bruce and Gunaratne, Preethi and Watson, Michael and Nam, Kiwoong and Backström, Niclas and Smeds, Linnea and Nabholz, Benoit and Itoh, Yuichiro and Whitney, Osceola and Pfenning, Andreas R and Howard, Jason and Völker, Martin and Skinner, Bejamin M and Griffin, Darren K and Ye, Liang and McLaren, William M and Flicek, Paul and Quesada, Victor and Velasco, Gloria and Lopez-Otin, Carlos and Puente, Xose S and Olender, Tsviya and Lancet, Doron and Smit, Arian F. A and Hubley, Robert and Konkel, Miriam K and Walker, Jerilyn A and Batzer, Mark A and Gu, Wanjun and Pollock, David D and Chen, Lin and Cheng, Ze and Eichler, Evan E and Stapley, Jessica and Slate, Jon and Ekblom, Robert and Birkhead, Tim and Burke, Terry and Burt, David and Scharff, Constance and Adam, Iris and Richard, Hugues and Sultan, Marc and Soldatov, Alexey and Lehrach, Hans and Edwards, Scott V and Yang, Shiaw-Pyng and Li, Xiaoching and Graves, Tina and Fulton, Lucinda and Nelson, Joanne and Chinwalla, Asif and Hou, Shunfeng and Mardis, Elaine R and Wilson, Richard K and Teknisk-naturvetenskapliga vetenskapsområdet and Evolutionsbiologi and Biologiska sektionen and Uppsala universitet and Institutionen för ekologi och genetik
Nature, ISSN 0028-0836, 04/2010, Volume 464, Issue 7289, pp. 757 - 762
Journal Article
by Locke, Devin P and Hillier, Ladeana W and Warren, Wesley C and Worley, Kim C and Nazareth, Lynne V and Muzny, Donna M and Yang, Shiaw-Pyng and Wang, Zhengyuan and Chinwalla, Asif T and Minx, Pat and Mitreva, Makedonka and Cook, Lisa and Delehaunty, Kim D and Fronick, Catrina and Schmidt, Heather and Fulton, Lucinda A and Fulton, Robert S and Nelson, Joanne O and Magrini, Vincent and Pohl, Craig and Graves, Tina A and Markovic, Chris and Cree, Andy and Dinh, Huyen H and Hume, Jennifer and Kovar, Christie L and Fowler, Gerald R and Lunter, Gerton and Meader, Stephen and Heger, Andreas and Ponting, Chris P and Marques-Bonet, Tomas and Alkan, Can and Chen, Lin and Cheng, Ze and Kidd, Jeffrey M and Eichler, Evan E and White, Simon and Searle, Stephen and Vilella, Albert J and Chen, Yuan and Flicek, Paul and Ma, Jian and Raney, Brian and Suh, Bernard and Burhans, Richard and Herrero, Javier and Haussler, David and Faria, Rui and Fernando, Olga and Darré, Fleur and Farré, Doménec and Gazave, Elodie and Oliva, Meritxell and Navarro, Arcadi and Roberto, Roberta and Capozzi, Oronzo and Archidiacono, Nicoletta and Valle, Giuliano Della and Purgato, Stefania and Rocchi, Mariano and Konkel, Miriam K and Walker, Jerilyn A and Ullmer, Brygg and Batzer, Mark A and Smit, Arian F. A and Hubley, Robert and Casola, Claudio and Schrider, Daniel R and Hahn, Matthew W and Quesada, Victor and Puente, Xose S and Ordõez, Gonzalo R and Ĺpez-Otín, Carlos and Vinar, Tomas and Brejova, Brona and Ratan, Aakrosh and Harris, Robert S and Miller, Webb and Kosiol, Carolin and Lawson, Heather A and Taliwal, Vikas and Martins, André L and Siepel, Adam and Roychoudhury, Arindam and Ma, Xin and Degenhardt, Jeremiah and Bustamante, Carlos D and Gutenkunst, Ryan N and Mailund, Thomas and Dutheil, Julien Y and Hobolth, Asger and Schierup, Mikkel H and Ryder, Oliver A and Yoshinaga, Yuko and De Jong, Pieter J and Weinstock, George M and Rogers, Jeffrey and Mardis, Elaine R and Gibbs, Richard A and ...
Nature, ISSN 0028-0836, 01/2011, Volume 469, Issue 7331, pp. 529 - 533
Journal Article
Nature, ISSN 0028-0836, 2004, Volume 432, Issue 7018, pp. 695 - 716
We present here a draft genome sequence of the red jungle fowl, Gallus gallus. Because the chicken is a modern descendant of the dinosaurs and the first... 
phylogenetic analysis | mammalian evolution | tissue-specific genes | brown-norway rat | non-ltr retrotransposons | major histocompatibility complex | olfactory receptor | mouse genome | recent segmental duplications | alcohol-dehydrogenase | MOUSE GENOME | NON-LTR RETROTRANSPOSONS | ALCOHOL-DEHYDROGENASE | PHYLOGENETIC ANALYSIS | MULTIDISCIPLINARY SCIENCES | BROWN-NORWAY RAT | RECENT SEGMENTAL DUPLICATIONS | MAJOR HISTOCOMPATIBILITY COMPLEX | TISSUE-SPECIFIC GENES | OLFACTORY RECEPTOR | MAMMALIAN EVOLUTION | Gene Duplication | Multigene Family - genetics | Conserved Sequence - genetics | Vertebrates - genetics | Physical Chromosome Mapping | Genomics | Humans | Long Interspersed Nucleotide Elements - genetics | Mutagenesis - genetics | Synteny | Genes - genetics | Short Interspersed Nucleotide Elements - genetics | RNA, Untranslated - genetics | Sequence Analysis, DNA | Pseudogenes - genetics | Animals | Retroviridae - genetics | DNA Transposable Elements - genetics | Chickens - genetics | Genome | Avian Proteins - genetics | Evolution, Molecular | Birds | Evolution | Genetic diversity | Gene expression | Mammals | Chromosomes | Research Support; U.S. Gov't; P.H.S | Research Support; U.S. Gov't; Non-P.H.S | Comparative Study | Long Interspersed Nucleotide Elements/genetics | Biology | Avian Proteins/genetics | Vertebrates/genetics | Short Interspersed Nucleotide Elements/genetics | Pseudogenes/genetics | Genetics | Research Support; Non-U.S. Gov't | Biologi | Natural Sciences | Biological Sciences | RNA; Untranslated/genetics | Mutagenesis/genetics | DNA Transposable Elements/genetics | Multigene Family/genetics | Retroviridae/genetics | Sequence Analysis; DNA | Genetik | Genes/genetics | Naturvetenskap | Conserved Sequence/genetics | Evolution; Molecular | Biologiska vetenskaper | Cell and molecular biology | Chickens/genetics | Cell- och molekylärbiologi
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 01/2013, Volume 41, Issue 1, pp. D70 - D82
We present a database of repetitive DNA elements, called Dfam (http://dfam.janelia.org). Many genomes contain a large fraction of repetitive DNA, much of which... 
ELEMENTS | SEQUENCES | BIOCHEMISTRY & MOLECULAR BIOLOGY | PROGRAM | Markov Chains | Humans | Molecular Sequence Annotation | Internet | Models, Statistical | Genome, Human | Databases, Nucleic Acid | DNA Transposable Elements
Journal Article
by Warren, Wesley C and Hillier, LaDeana W and Marshall Graves, Jennifer A and Birney, Ewan and Ponting, Chris P and Grützner, Frank and Belov, Katherine and Miller, Webb and Clarke, Laura and Chinwalla, Asif T and Yang, Shiaw-Pyng and Heger, Andreas and Locke, Devin P and Miethke, Pat and Waters, Paul D and Veyrunes, Frédéric and Fulton, Lucinda and Fulton, Bob and Graves, Tina and Wallis, John and Puente, Xose S and López-Otín, Carlos and Ordóñez, Gonzalo R and Eichler, Evan E and Chen, Lin and Cheng, Ze and Deakin, Janine E and Alsop, Amber and Thompson, Katherine and Kirby, Patrick and Papenfuss, Anthony T and Wakefield, Matthew J and Olender, Tsviya and Lancet, Doron and Huttley, Gavin A and Smit, Arian F. A and Pask, Andrew and Temple-Smith, Peter and Batzer, Mark A and Walker, Jerilyn A and Konkel, Miriam K and Harris, Robert S and Whittington, Camilla M and Wong, Emily S. W and Gemmell, Neil J and Buschiazzo, Emmanuel and Vargas Jentzsch, Iris M and Merkel, Angelika and Schmitz, Juergen and Zemann, Anja and Churakov, Gennady and Ole Kriegs, Jan and Brosius, Juergen and Murchison, Elizabeth P and Sachidanandam, Ravi and Smith, Carly and Hannon, Gregory J and Tsend-Ayush, Enkhjargal and McMillan, Daniel and Attenborough, Rosalind and Rens, Willem and Ferguson-Smith, Malcolm and Lefèvre, Christophe M and Sharp, Julie A and Nicholas, Kevin R and Ray, David A and Kube, Michael and Reinhardt, Richard and Pringle, Thomas H and Taylor, James and Jones, Russell C and Nixon, Brett and Dacheux, Jean-Louis and Niwa, Hitoshi and Sekita, Yoko and Huang, Xiaoqiu and Stark, Alexander and Kheradpour, Pouya and Kellis, Manolis and Flicek, Paul and Chen, Yuan and Webber, Caleb and Hardison, Ross and Nelson, Joanne and Hallsworth-Pepin, Kym and Delehaunty, Kim and Markovic, Chris and Minx, Pat and Feng, Yucheng and Kremitzki, Colin and Mitreva, Makedonka and Glasscock, Jarret and Wylie, Todd and Wohldmann, Patricia and Thiru, Prathapan and Nhan, Michael N and Pohl, Craig S and Smith, Scott M and Hou, Shunfeng and Renfree, Marilyn B and ... and A list of authors and their affiliations appears at the end of the paper
Nature, ISSN 0028-0836, 05/2008, Volume 453, Issue 7192, pp. 175 - 183
Journal Article