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BMC Bioinformatics, ISSN 1471-2105, 04/2006, Volume 7, Issue 1, pp. 191 - 191
Journal Article
Bioinformatics (Oxford, England), ISSN 1367-4803, 04/2019
Methods for reconstructing developmental trajectories from time series single cell RNA-Seq (scRNA-Seq) data can be largely divided into two categories. The... 
Journal Article
BMC CANCER, ISSN 1471-2407, 04/2019, Volume 19, Issue 1, pp. 370 - 370
BackgroundMost methods that integrate network and mutation data to study cancer focus on the effects of genes/proteins, quantifying the effect of mutations or... 
SURVIVAL | DNA-BINDING DOMAIN | TERT PROMOTER MUTATIONS | NETWORK | RECEPTOR | Breast cancer | TP53 MUTATIONS | TCGA | BREAST-CANCER | ONCOLOGY | Feature construction | Protein interaction | EXPRESSION | CARCINOMA | PROGRESSION | Gene mutations | Analysis | Genetic research | Genetic aspects | Research | Protein-protein interactions | Interactomes | Cancer
Journal Article
NATURE REVIEWS GENETICS, ISSN 1471-0056, 08/2012, Volume 13, Issue 8, pp. 552 - 564
Biological processes are often dynamic, thus researchers must monitor their activity at multiple time points. The most abundant source of information regarding... 
METABOLIC NETWORK | RNA-SEQ | REGULATORY NETWORKS | TRANSCRIPTIONAL NETWORK | GENETICS & HEREDITY | NETWORK COMPONENT ANALYSIS | HUMAN CELL-CYCLE | BAYESIAN-ESTIMATION | SACCHAROMYCES-CEREVISIAE | ENVIRONMENTAL-CHANGES | MICROARRAY ANALYSIS
Journal Article
Journal Article
Journal Article
PLoS ONE, ISSN 1932-6203, 2011, Volume 6, Issue 7, pp. e22730 - e22730
Host cells respond to exogenous infectious agents such as viruses, including HIV-1. Studies have evaluated the changes associated with virus infection at the... 
IMMUNE | CELLULAR GENE-EXPRESSION | GENOMEWIDE ASSOCIATION | IN-VIVO | BIOLOGY | CLINICAL AIDS | TYPE-1 | UP-REGULATION | T-CELLS | DISEASE PROGRESSION | MICRORNA | Leukocytes, Mononuclear - metabolism | Oligonucleotide Array Sequence Analysis | Signal Transduction | HIV Infections - genetics | HIV Infections - virology | Humans | RNA, Messenger - genetics | Gene Expression Regulation | Gene Expression Profiling | RNA, Messenger - metabolism | Reverse Transcriptase Polymerase Chain Reaction | Leukocytes, Mononuclear - virology | HIV-1 - physiology | Biomarkers, Tumor - metabolism | Biomarkers, Tumor - genetics | MicroRNAs - physiology | Medical research | Genomics | Genes | HIV patients | Development and progression | Genomes | Genetic transcription | T cells | HIV (Viruses) | Infection | MicroRNA | Messenger RNA | Medicine, Experimental | Comparative analysis | Health aspects | Transcription | Viruses | Leukocytes (mononuclear) | Infections | Lymphocytes T | Cell activation | Pathways | Acquired immune deficiency syndrome--AIDS | Human immunodeficiency virus--HIV | Cell cycle | Peripheral blood mononuclear cells | Genetics | Public health | Enzymes | Immune response | Polypeptides | MiRNA | Apolipoproteins | Gene expression | Ribonucleic acid--RNA | Signaling | Infectious diseases | DNA microarrays | MicroRNAs | Biomarkers | Lymphomas | Artificial intelligence | Apoptosis | Index Medicus | RNA | Acquired immune deficiency syndrome | Ribonucleic acid | AIDS | HIV | Human immunodeficiency virus
Journal Article
Bioinformatics (Oxford, England), ISSN 1367-4803, 02/2019
Intra-tumor heterogeneity is one of the key confounding factors in deciphering tumor evolution. Malignant cells exhibit variations in their gene expression,... 
Journal Article