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by Saltz, Joel and Gupta, Rajarsi and Hou, Le and Kurc, Tahsin and Singh, Pankaj and Nguyen, Vu and Samaras, Dimitris and Shroyer, Kenneth R and Zhao, Tianhao and Batiste, Rebecca and Van Arnam, John and Caesar-Johnson, Samantha J and Demchok, John A and Felau, Ina and Kasapi, Melpomeni and Ferguson, Martin L and Hutter, Carolyn M and Sofia, Heidi J and Tarnuzzer, Roy and Wang, Zhining and Yang, Liming and Zenklusen, Jean C and Zhang, Jiashan (Julia) and Chudamani, Sudha and Liu, Jia and Lolla, Laxmi and Naresh, Rashi and Pihl, Todd and Sun, Qiang and Wan, Yunhu and Wu, Ye and Cho, Juok and DeFreitas, Timothy and Frazer, Scott and Gehlenborg, Nils and Getz, Gad and Heiman, David I and Kim, Jaegil and Lawrence, Michael S and Lin, Pei and Meier, Sam and Noble, Michael S and Saksena, Gordon and Voet, Doug and Zhang, Hailei and Bernard, Brady and Chambwe, Nyasha and Dhankani, Varsha and Knijnenburg, Theo and Kramer, Roger and Leinonen, Kalle and Liu, Yuexin and Miller, Michael and Reynolds, Sheila and Shmulevich, Ilya and Thorsson, Vesteinn and Zhang, Wei and Akbani, Rehan and Broom, Bradley M and Hegde, Apurva M and Ju, Zhenlin and Kanchi, Rupa S and Korkut, Anil and Li, Jun and Liang, Han and Ling, Shiyun and Liu, Wenbin and Lu, Yiling and Mills, Gordon B and Ng, Kwok-Shing and Rao, Arvind and Ryan, Michael and Wang, Jing and Weinstein, John N and Zhang, Jiexin and Abeshouse, Adam and Armenia, Joshua and Chakravarty, Debyani and Chatila, Walid K and de Bruijn, Ino and Gao, Jianjiong and Gross, Benjamin E and Heins, Zachary J and Kundra, Ritika and La, Konnor and Ladanyi, Marc and Luna, Augustin and Nissan, Moriah G and Ochoa, Angelica and Phillips, Sarah M and Reznik, Ed and Sanchez-Vega, Francisco and Sander, Chris and Schultz, Nikolaus and Sheridan, Robert and Sumer, S. Onur and Sun, Yichao and Taylor, Barry S and Wang, Jioajiao and Zhang, Hongxin and ... and The Cancer Genome Atlas Research Network and Canc Genome Atlas Res Network and Cancer Genome Atlas Research Network
Cell Reports, ISSN 2211-1247, 04/2018, Volume 23, Issue 1, pp. 181 - 193.e7
Beyond sample curation and basic pathologic characterization, the digitized H&E-stained images of TCGA samples remain underutilized. To highlight this... 
deep learning | lymphocytes | digital pathology | bioinformatics | computer vision | tumor-infiltrating lymphocytes | immuno-oncology | tumor microenvironment | machine learning | artificial intelligence | MELANOMA | IMMUNE CONTEXTURE | GENOMIC ANALYSES | SOLID TUMORS | SUBTYPES | SQUAMOUS-CELL CARCINOMA | PROPOSAL | CANCER | STANDARDIZED METHOD | BREAST | CELL BIOLOGY
Journal Article
The Lancet Oncology, ISSN 1470-2045, 11/2018, Volume 19, Issue 11, pp. e588 - e653
Journal Article
Journal of Surgical Oncology, ISSN 0022-4790, 04/2016, Volume 113, Issue 5, pp. 508 - 514
Journal Article
Journal of Surgical Oncology, ISSN 0022-4790, 04/2016, Volume 113, Issue 5, pp. 508 - 514
Journal Article
The American Journal of Medicine, ISSN 0002-9343, 01/2020, Volume 133, Issue 1, pp. 19 - 25
Poor dietary quality is a leading contributor to mortality in the United States, and to most cardiovascular risk factors. By providing education on lifestyle... 
Prevention | Diet | Nutrition | Inpatient | Cardiovascular disease | Menu | Outpatient | MORTALITY | SMOKING-CESSATION | SODIUM | ADULTS | BLOOD-PRESSURE | STROKE | MEDICINE, GENERAL & INTERNAL | HEART-DISEASE | VEGETARIAN DIETS | ASSOCIATION | FOOD
Journal Article
Current Surgery Reports, ISSN 2167-4817, 4/2016, Volume 4, Issue 4, pp. 1 - 8
Breast-conserving therapy including partial mastectomy and radiation is commonly performed for patients who are surgical candidates for breast cancer. Although... 
Medicine & Public Health | Surgery | Breast surgery | Margins | Intraoperative | Breast cancer | Conserve breast
Journal Article
Pathology Case Reviews, ISSN 1082-9784, 09/2012, Volume 17, Issue 5, pp. 177 - 185
Journal Article
AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science, ISSN 2153-4063, 2018, Volume 2017, p. 227
Segmentation of nuclei in whole slide tissue images is a common methodology in pathology image analysis. Most segmentation algorithms are sensitive to input... 
Journal Article
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), ISSN 0302-9743, 2016, Volume 9699, pp. 478 - 485
Conference Proceeding
ISSN 1470-2045, 2018
Full integration of oncology and palliative care relies on the specific knowledge and skills of two modes of care: the tumour-directed approach, the main focus... 
Journal Article
07/2019
Deep learning classifiers for characterization of whole slide tissue morphology require large volumes of annotated data to learn variations across different... 
Journal Article
05/2019
Quantitative assessment of Tumor-TIL spatial relationships is increasingly important in both basic science and clinical aspects of breast cancer research. We... 
Journal Article