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by Sczyrba, Alexander and Hofmann, Peter and Belmann, Peter and Koslicki, David and Janssen, Stefan and Dröge, Johannes and Gregor, Ivan and Majda, Stephan and Fiedler, Jessika and Dahms, Eik and Bremges, Andreas and Fritz, Adrian and Garrido-Oter, Ruben and Jørgensen, Tue Sparholt and Shapiro, Nicole and Blood, Philip D and Gurevich, Alexey and Bai, Yang and Turaev, Dmitrij and Demaere, Matthew Z and Chikhi, Rayan and Nagarajan, Niranjan and Quince, Christopher and Meyer, Fernando and Balvočiutė, Monika and Hansen, Lars Hestbjerg and Sørensen, Søren J and Chia, Burton K H and Denis, Bertrand and Froula, Jeff L and Wang, Zhong and Egan, Robert and Don Kang, Dongwan and Cook, Jeffrey J and Deltel, Charles and Beckstette, Michael and Lemaitre, Claire and Peterlongo, Pierre and Rizk, Guillaume and Lavenier, Dominique and Wu, Yu-Wei and Singer, Steven W and Jain, Chirag and Strous, Marc and Klingenberg, Heiner and Meinicke, Peter and Barton, Michael D and Lingner, Thomas and Lin, Hsin-Hung and Liao, Yu-Chieh and Silva, Genivaldo Gueiros Z and Cuevas, Daniel A and Edwards, Robert A and Saha, Surya and Piro, Vitor C and Renard, Bernhard Y and Pop, Mihai and Klenk, Hans-Peter and Göker, Markus and Kyrpides, Nikos C and Woyke, Tanja and Vorholt, Julia A and Schulze-Lefert, Paul and Rubin, Edward M and Darling, Aaron E and Rattei, Thomas and McHardy, Alice C and Univ. of California, Oakland, CA (United States) and Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States). National Energy Research Scientific Computing Center (NERSC)
Nature Methods, ISSN 1548-7091, 10/2017, Volume 14, Issue 11, pp. 1063 - 1071
Journal Article
Journal Article
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 01/2017, Volume 114, Issue 5, pp. E791 - E800
Journal Article
PLoS Pathogens, ISSN 1553-7366, 2015, Volume 11, Issue 1, pp. 1 - 28
Journal Article
PLoS Genetics, ISSN 1553-7390, 03/2015, Volume 11, Issue 3
  One hallmark of pathogenic yersiniae is their ability to rapidly adjust their life-style and pathogenesis upon host entry. In order to capture the range,... 
Datasets | Signal transduction | Temperature | Annotations | Pathogenesis | Bacteria | Infections | Metabolism | Gene expression | Chromosomes | Bacteriology | Binding sites
Journal Article
BMC Bioinformatics, ISSN 1471-2105, 08/2006, Volume 7, Issue 1, pp. 389 - 389
Background: In biological sequence analysis, position specific scoring matrices (PSSMs) are widely used to represent sequence motifs in nucleotide as well as... 
PROFILES | DATABASE | SEQUENCES | BLOCKS | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | BIOCHEMICAL RESEARCH METHODS | PATTERNS | PROTEINS | PROBABILITIES | PRINTS | Amino Acid Sequence | Sequence Alignment - methods | Algorithms | Matched-Pair Analysis | Software | Research Design | Databases, Factual | Index Medicus
Journal Article
European Journal of Immunology, ISSN 0014-2980, 12/2017, Volume 47, Issue 12, pp. 2142 - 2152
Intestinal regulatory T cells (Tregs) are fundamental in peripheral tolerance toward commensals and food‐borne antigens. Accordingly, gut‐draining mesenteric... 
Regulatory T cells | Mesenteric lymph nodes | Extracellular vesicles | Intestinal tolerance | Fibroblastic reticular cells | IMMUNITY | Extracellular vesicles | IMMUNOLOGY | Regulatory T cells | INTESTINAL DENDRITIC CELLS | RESPONSES | EMERGING ROLE | IMPROVES | GENERATION | Fibroblastic reticular cells | Mesenteric lymph nodes | TGF-BETA ACTIVATION | EXPRESSION | ANTIGEN | Forkhead Transcription Factors - immunology | Transforming Growth Factor beta - immunology | Cell Line | Microscopy, Electron, Transmission | T-Lymphocytes, Regulatory - metabolism | Microscopy, Electron, Scanning | Extracellular Vesicles - ultrastructure | Stromal Cells - metabolism | Gene Expression Profiling - methods | Stromal Cells - immunology | Lymph Nodes - immunology | Mice, Knockout | T-Lymphocytes, Regulatory - immunology | Stromal Cells - ultrastructure | Animals | Extracellular Vesicles - immunology | Transforming Growth Factor beta - genetics | Extracellular Vesicles - genetics | Forkhead Transcription Factors - metabolism | Mesentery - immunology | Mice, Inbred BALB C | Fibronectins | Bone morphogenetic proteins | T cells | Transforming growth factors | Analysis | Antigens | Intercellular signalling | Commensals | Immunoregulation | Therapeutic applications | T cell receptors | Lymphocytes T | Ribonucleic acid--RNA | Immunological tolerance | Lymph nodes | Drainage | Molecular modelling | Intestine | Lymphocytes | Stromal cells | Cell lines | Foxp3 protein | Skin | Lymph | Index Medicus | Basic | Immunomodulation and immune therapies
Journal Article
Journal Article