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Nucleic Acids Research, ISSN 0305-1048, 11/2019, Volume 47, Issue 20, pp. 10543 - 10552
Abstract With the rapid increase of sequenced metazoan mitochondrial genomes, a detailed manual annotation is becoming more and more infeasible. While it is... 
Computational Biology
Journal Article
Bioinformatics, ISSN 1367-4803, 03/2018, Volume 34, Issue 6, pp. 1066 - 1068
Journal Article
Bioinformatics, ISSN 1367-4803, 03/2018, Volume 34, Issue 6, pp. 1066 - 1068
Abstract Motivation Alternative splicing is a biological process of fundamental importance in most eukaryotes. It plays a pivotal role in cell differentiation... 
RNA-SEQ | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | BIOCHEMICAL RESEARCH METHODS | MATHEMATICAL & COMPUTATIONAL BIOLOGY | Software | Sequence Analysis, RNA | Alternative Splicing | Protein Isoforms - genetics | RNA - genetics
Journal Article
NUCLEIC ACIDS RESEARCH, ISSN 0305-1048, 09/2019, Volume 47, Issue 17, pp. 9087 - 9103
Most human cancers acquire mutations causing defects in the p53 signaling pathway. The tumor suppressor p53 becomes activated in response to genotoxic stress... 
PRB | COMPLEX | INHIBITION | RETINOBLASTOMA PROTEIN | BIOCHEMISTRY & MOLECULAR BIOLOGY | G CONTROL | TRANSCRIPTIONAL REPRESSION | TUMOR-SUPPRESSOR | POCKET PROTEIN | B-MYB | EXPRESSION | Gene regulation, Chromatin and Epigenetics
Journal Article
Oncotarget, 08/2018, Volume 9, Issue 67, pp. 32855 - 32867
Here, we present a miR mechanism which is active in the nucleus and is essential for the production of intron included, C-terminal truncated and biologically... 
Vim3 | MiR-15 | MiR-498 | DNA interaction | Mxi-2
Journal Article
Proceedings of the National Academy of Sciences, USA, ISSN 0027-8424, 06/2016, Volume 113, Issue 26, pp. 7237 - 7237
The dominant cause of malaria in Malaysia is now Plasmodium knowlesi, a zoonotic parasite of cynomolgus macaque monkeys found throughout South East Asia.... 
Journal Article
Methods in molecular biology (Clifton, N.J.), ISSN 1064-3745, 2014, Volume 1097, pp. 125 - 141
Many biologically important RNA structures are conserved in evolution leading to characteristic mutational patterns. RNAalifold is a widely used program to... 
Structure prediction | Consensus structure | Functional RNA | RNA structure | Consensus Sequence | RNA Folding | Computational Biology - methods | RNA - chemistry | RNA - genetics | Sequence Analysis, RNA - methods | Sequence Alignment - methods | Thermodynamics | Algorithms | Software | Internet | Nucleic Acid Conformation | Web Browser
Journal Article
Methods in Molecular Biology, ISSN 1064-3745, 2014, Volume 1097, pp. 125 - 141
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 7/2008, Volume 36, Issue suppl_2, pp. W70 - W74
The Vienna RNA Websuite is a comprehensive collection of tools for folding, design and analysis of RNA sequences. It provides a web interface to the most... 
THERMODYNAMICS | SEQUENCES | ALIGNMENT | BIOCHEMISTRY & MOLECULAR BIOLOGY | SECONDARY STRUCTURE PREDICTION | BINDING | PARTITION-FUNCTION | PROBABILITIES | Sequence Alignment | Software | Sequence Analysis, RNA | Internet | Nucleic Acid Conformation | RNA - chemistry
Journal Article
Nature, ISSN 0028-0836, 2018, Volume 555, Issue 7696, pp. 321 - 327
Journal Article
BMC Bioinformatics, ISSN 1471-2105, 11/2008, Volume 9, Issue 1, pp. 474 - 474
Journal Article
Methods in Molecular Biology, ISSN 1064-3745, 2015, Volume 1269, pp. 307 - 326
The ViennaRNA package is a widely used collection of programs for thermodynamic RNA secondary structure prediction. Over the years, many additional tools have... 
RNA-RNA interaction prediction | RNA secondary structure prediction | Noncoding RNA detection | Sequence design | RNA Folding | Algorithms | RNA, Untranslated - chemistry | Software | Internet | Nucleic Acid Conformation | RNA - chemistry
Journal Article
Genome Research, ISSN 1088-9051, 02/2016, Volume 26, Issue 2, pp. 256 - 262
Journal Article
Nature Genetics, ISSN 1061-4036, 12/2012, Volume 44, Issue 12, pp. 1316 - 1320
Journal Article