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phylogeny (23) 23
birds (19) 19
evolution (19) 19
dna (15) 15
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genetics & heredity (5) 5
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aves (4) 4
base sequence (4) 4
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genera (4) 4
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taxonomy (4) 4
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adaptive radiation (2) 2
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biological diversity (2) 2
chemistry (2) 2
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classification (2) 2
codons (2) 2
cytochrome-b (2) 2
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cytochromes (2) 2
divergence (2) 2
dna - genetics (2) 2
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dna sequences (2) 2
dna sequencing (2) 2
dolphins (2) 2
dolphins - classification (2) 2
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1. Full Text Metagenomic Analyses of Viruses in Stool Samples from Children with Acute Flaccid Paralysis
by Joseph G. Victoria and Amit Kapoor and Linlin Li and Olga Blinkova and Beth Slikas and Chunlin Wang and Asif Naeem and Sohail Zaidi and Eric Delwart
Journal of Virology, ISSN 0022-538X, 05/2009, Volume 83, Issue 9, pp. 4642 - 4651
Article Usage Stats Services JVI Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley... 
PORCINE CIRCOVIRUS | ENTEROVIRUS-71 | VIROLOGY | VIRAL COMMUNITY | DICISTROVIRIDAE | SEQUENCE | GUT | TAURA-SYNDROME VIRUS | INFECTION | HUMAN FECES | EPIDEMIOLOGY | Acute Disease | Enterovirus - classification | Health | Genome, Viral - genetics | Humans | Child, Preschool | Infant | Male | Neurosyphilis - virology | Phylogeny | Sequence Analysis, DNA | Case-Control Studies | Neurosyphilis - epidemiology | Asia - epidemiology | Enterovirus Infections - epidemiology | Feces - virology | Enterovirus - genetics | Enterovirus Infections - virology | Adolescent | Female | Neurosyphilis - blood | Child | Genetic Diversity and Evolution
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2. Full Text The biogeography of the Plastisphere: implications for policy
by Amaral-Zettler, Linda A and Zettler, Erik R and Slikas, Beth and Boyd, Gregory D and Melvin, Donald W and Morrall, Clare E and Proskurowski, Giora and Mincer, Tracy J
Frontiers in Ecology and the Environment, ISSN 1540-9295, 12/2015, Volume 13, Issue 10, pp. 541 - 546
Microplastics (particles less than 5 mm) numerically dominate marine debris and occur from coastal waters to mid-ocean gyres, where surface circulation... 
Aquatic communities | Microorganisms | Oceans | Water samples | Biogeography | Plastics | Polymers | RESEARCH COMMUNICATIONS | Marine debris | Sea water | Gyres | DISPERSAL | MICROORGANISMS | ENVIRONMENTAL SCIENCES | PLASTIC DEBRIS | OCEAN | SIZE | SURFACE | ECOLOGY | DIVERSITY
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3. Full Text Multiple Diverse Circoviruses Infect Farm Animals and Are Commonly Found in Human and Chimpanzee Feces
by Linlin Li and Amit Kapoor and Beth Slikas and Oderinde Soji Bamidele and Chunlin Wang and Shahzad Shaukat and Muhammad Alam Masroor and Michael L. Wilson and Jean-Bosco N. Ndjango and Martine Peeters and Nicole D. Gross-Camp and Martin N. Muller and Beatrice H. Hahn and Nathan D. Wolfe and Hinda Triki and Joanne Bartkus and Sohail Zahoor Zaidi and Eric Delwart
Journal of Virology, ISSN 0022-538X, 02/2010, Volume 84, Issue 4, pp. 1674 - 1682
Article Usage Stats Services JVI Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley... 
PORCINE-CIRCOVIRUS | RECOMBINATION | XENOTRANSPLANTATION | REPLICATION | VIROLOGY | VIRAL COMMUNITY | DNA | FEATHER DISEASE VIRUS | CATTLE | TYPE-2 | GENOME | Circoviridae Infections - veterinary | Pan troglodytes - virology | Humans | Circoviridae Infections - virology | Molecular Sequence Data | DNA Primers - genetics | Circoviridae - pathogenicity | Phylogeny | Meat - virology | Sus scrofa - virology | Genetic Variation | Feces - virology | Animals | Circoviridae - classification | Base Sequence | Animals, Domestic - virology | Genes, Viral | Adult | DNA, Viral - genetics | Child | Circoviridae - genetics | Circoviridae - isolation & purification | Pan troglodytes | DNA Primers | Meat | Animals, Domestic | Virology | Life Sciences | Microbiology and Parasitology | Circoviridae | Feces | Sus scrofa | DNA, Viral | Circoviridae Infections | Genetic Diversity and Evolution
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4. Full Text Initial evidence for adaptive selection on the NADH subunit two of freshwater dolphins by analyses of mitochondrial genomes
by Caballero, Susana and Duchêne, Sebastian and Garavito, Manuel F and Slikas, Beth and Baker, C. Scott
PLoS ONE, ISSN 1932-6203, 05/2015, Volume 10, Issue 5, p. e0123543
A small number of cetaceans have adapted to an entirely freshwater environment, having colonized rivers in Asia and South America from an ancestral origin in... 
COMPLEX I | SWISS-MODEL | WHALES | EVOLUTION | QUINONE OXIDOREDUCTASE | PHYLOGENETIC ANALYSIS | MEMBRANE | MULTIDISCIPLINARY SCIENCES | OSMOREGULATION | ADAPTATION | TUCUXI SOTALIA-FLUVIATILIS | Adaptation, Physiological | Amino Acid Sequence | NAD - genetics | Selection, Genetic | Molecular Sequence Data | Phylogeny | Dolphins - classification | Dolphins - genetics | NAD - chemistry | Animals | Protein Subunits - chemistry | Genome, Mitochondrial | Amino Acid Substitution | Protein Subunits - genetics | Delphinidae | Physiological aspects | NADH dehydrogenase | Genetic aspects | Mitochondrial DNA | Research | Dolphins | Divergence | Positive selection | Biochemistry | Genomes | Aquatic habitats | Dehydrogenase | Freshwater | Marine mammals | Amino acid substitution | Marine environment | Substitutes | Proteins | Taxa | Mitochondria | Marine environments | NADH | E coli | Freshwater environments | Phylogenetics | Fish | Mathematical models | Adaptation | Hypothesis testing | Translocation | Fisheries | Biophysics | Rivers | Gene expression | Aquatic mammals | Studies | Acids | Nicotinamide adenine dinucleotide | Dolphins & porpoises | Molecular biology | Evolution & development | Protein structure
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5. Full Text Phylogeny of titmice (Paridae): II. Species relationships based on sequences of the mitochondrial cytochrome-b gene
by Gill, FB and Slikas, B and Sheldon, FH
AUK, ISSN 0004-8038, 01/2005, Volume 122, Issue 1, pp. 121 - 143
We present a phylogenetic hypothesis for 40 species in the bird family Paridae, based on comparisons of nucleotide sequences of the mitochondrial cytochrome-b... 
SUBSTITUTION | ORNITHOLOGISTS UNION CHECKLIST | biogeography | DNA sequences | titmice | PATTERNS | Paridae | ORGANIZATION | DNA-DNA HYBRIDIZATION | EVOLUTION | CONSEQUENCES | phylogeny | NORTH-AMERICAN BIRDS | PARUS | ORNITHOLOGY | morphological stasis | AVES | cytochrome b | Nature | Evolution | Birds | Genetics | Taxonomy | Deoxyribonucleic acid--DNA
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6. Full Text PHYLOGENY OF TITMICE (PARIDAE): II. SPECIES RELATIONSHIPS BASED ON SEQUENCES OF THE MITOCHONDRIAL CYTOCHROME-B GENE
by Frank B. Gill and Beth Slikas and Frederick H. Sheldon
The Auk, ISSN 0004-8038, 2005, Volume 122, Issue 1, pp. 121 - 143
Abstract We present a phylogenetic hypothesis for 40 species in the bird family Paridae, based on comparisons of nucleotide sequences of the mitochondrial... 
Paridae | biogeography | DNA sequences | titmice | phylogeny | morphological stasis | cytochrome b | Morphological stasis | Cytochrome b | Titmice | Biogeography | Phylogeny
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7. Full Text Charting the course of reed-warblers across the Pacific islands
by Alice Cibois and Jon S. Beadell and Gary R. Graves and Eric Pasquet and Beth Slikas and Sarah A. Sonsthagen and Jean-Claude Thibault and Robert C. Fleischer
Journal of Biogeography, ISSN 0305-0270, 10/2011, Volume 38, Issue 10, pp. 1963 - 1975
Aim: Deciphering the complex colonization history of island archipelagos is greatly facilitated by comprehensive phylogenies. In this study we investigate the... 
Taxa | Biological taxonomies | Geographical dynamics of lineages | Marine ecology | Warblers | Polynesian studies | Biogeography | Phylogenetics | Birds | Archipelagos | Phylogeny | Pacific Ocean islands | back‐colonization | Polynesia | colonization patterns | phylogeny | island biogeography | Micronesia | reed‐warblers | Acrocephalus | Acrocephalidae | Colonization patterns | Island biogeography | Reed-warblers | Back-colonization | K-AR AGES | MONARCHS POMAREA | reed-warblers | HENDERSON ISLAND | HAWAIIAN-ISLANDS | NATURAL-HISTORY | MOLECULAR PHYLOGENY | FRENCH-POLYNESIA | SOUTH-PACIFIC | GEOGRAPHY, PHYSICAL | PHYLOGENETIC-RELATIONSHIPS | ECOLOGY | back-colonization | MITOCHONDRIAL SEQUENCE DATA | Mitochondrial DNA | Museums | Cytochrome b | Analysis
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8. Full Text Low diversity in the mitogenome of sperm whales revealed by Next-Generation Sequencing
by Alexander, Alana and Steel, Debbie and Slikas, Beth and Hoekzema, Kendra and Carraher, Colm and Parks, Matthew and Cronn, Richard and Baker, C. Scott
Genome Biology and Evolution, ISSN 1759-6653, 2013, Volume 5, Issue 1, pp. 113 - 129
Large population sizes and global distributions generally associate with high mitochondrial DNA control region (CR) diversity. The sperm whale (Physeter... 
Substitution rates | MtDNA | Bayesian phylogenetics | Cetacean | Mitochondrial genome | Population genetics | Nucleotide diversity | Physeter macrocephalus | DOLPHINS | population genetics | NUCLEAR | PHYLOGEOGRAPHY | mtDNA | HUMPBACK WHALES | mitochondrial genome | nucleotide diversity | MITOCHONDRIAL-DNA VARIATION | GENOME | POPULATION GENETIC-STRUCTURE | EVOLUTIONARY BIOLOGY | NORTH-ATLANTIC | ORCINUS-ORCA | GENETICS & HEREDITY | substitution rates | CAUTIONARY TALE | cetacean | Sperm Whale - classification | Open Reading Frames | Genome, Mitochondrial - genetics | Molecular Sequence Data | Sperm Whale - genetics | Locus Control Region | Phylogeny | Sequence Analysis, DNA | Dolphins - classification | Dolphins - genetics | Genetic Variation | Animals | Base Sequence | Evolution, Molecular
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9. Full Text Comparative mitochondrial and chloroplast genomics of a genetically distinct form of Sargassum contributing to recent “Golden Tides” in the Western Atlantic
by Amaral‐Zettler, Linda A and Dragone, Nicholas B and Schell, Jeffrey and Slikas, Beth and Murphy, Leslie G and Morrall, Clare E and Zettler, Erik R
Ecology and Evolution, ISSN 2045-7758, 01/2017, Volume 7, Issue 2, pp. 516 - 525
Over the past 5 years, massive accumulations of holopelagic species of the brown macroalga Sargassum in coastal areas of the Caribbean have created “golden... 
accumulations | macroalgae | Sargasso Sea | strandings | mitogenome | chloroplast genome | Synteny | Fisheries | Genomes | Phylogeny | Biodiversity | Molecular chains | Coastal zone | Impact analysis | Tourism | Mitochondria | Conserved sequence | Chloroplasts | Evolutionary conservation | Primers | Interrogation | Economic impact | Cyclooxygenase-2 | Species | Distribution patterns
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10. Full Text Recognizing and Testing Homology of Courtship Displays in Storks (Aves: Ciconiiformes: Ciconiidae)
by Beth Slikas
Evolution, ISSN 0014-3820, 6/1998, Volume 52, Issue 3, pp. 884 - 893
Ethological studies in the 1940s and 1950s, most notably those of Lorenz and Tinbergen, emphasized a historical perspective. By the 1970s, the notion that... 
Biological taxonomies | Mating behavior | Bird nesting | Storks | Male animals | Personality traits | Evolution | Phylogeny | Genera | Genetic hybridization | phylogeny | Avian behavior | behavioral evolution | congruence | DNA‐DNA hybridization | Behavioral evolution | Congruence | DNA-DNA hybridization | SEQUENCES | PHYLOGENETIC ANALYSIS | BEHAVIOR | avian behavior | EVOLUTIONARY BIOLOGY | HOMOPLASY | BIOLOGY | GENETICS & HEREDITY | ECOLOGY | WORLD | Research | Behavior | Social behavior in animals | Courtship of animals
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11. Full Text Comparative mitochondrial and chloroplast genomics of a genetically distinct form of Sargassum contributing to recent "Golden Tides" in the Western Atlantic
by Amaral-Zettler, LA and Dragone, NB and Schell, J and Slikas, B and Murphy, LG and Morrall, CE and Zettler, ER
ECOLOGY AND EVOLUTION, ISSN 2045-7758, 01/2017, Volume 7, Issue 2, pp. 516 - 525
Over the past 5 years, massive accumulations of holopelagic species of the brown macroalga Sargassum in coastal areas of the Caribbean have created "golden... 
REVISION | FUCALES | Sargasso Sea | PHYLOGENETIC ANALYSES | PHAEOPHYCEAE | accumulations | VARIABILITY | EVOLUTIONARY BIOLOGY | MODELS | macroalgae | mitogenome | ECOLOGY | strandings | chloroplast genome
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12. Full Text Phylogeny of swallows (Aves: Hirundinidae) estimated from nuclear and mitochondrial DNA sequences
by Sheldon, Frederick H and Whittingham, Linda A and Moyle, Robert G and Slikas, Beth and Winkler, David W
Molecular Phylogenetics and Evolution, ISSN 1055-7903, 2005, Volume 35, Issue 1, pp. 254 - 270
The phylogeny of swallows was reconstructed by comparing segments of three genes, nuclear β-fibrinogen intron 7 (βfib7), mitochondrial cytochrome (cytb), and... 
Mitochondrial DNA | Nuclear DNA | Hirundinidae | Swallow phylogeny | DNA sequencing | nuclear DNA | SUBSTITUTION | swallow phylogeny | mitochondrial DNA | BIOCHEMISTRY & MOLECULAR BIOLOGY | INCONGRUENCE | HYBRIDIZATION | EVOLUTIONARY BIOLOGY | EVOLUTION | LENGTH DIFFERENCE TEST | GENETICS & HEREDITY | SYSTEMATICS | UTILITY | LIKELIHOOD | CYTOCHROME-B GENE | DNA - genetics | Animals | DNA, Mitochondrial - genetics | Cell Nucleus - genetics | Species Specificity | Swallows - genetics | Swallows - classification | Base Sequence | Phylogeny | DNA Primers | Fibrin | Cytochrome b | Evolutionary biology | Analysis | Fibrinogen | Museums | Ecology | Natural history
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13. Full Text Phylogeny of the Tree Swallow Genus, Tachycineta (Aves: Hirundinidae), by Bayesian Analysis of Mitochondrial DNA Sequences
by Whittingham, Linda A and Slikas, Beth and Winkler, David W and Sheldon, Frederick H
Molecular Phylogenetics and Evolution, ISSN 1055-7903, 03/2002, Volume 22, Issue 3, pp. 430 - 441
To set the stage for historical analyses of the ecology and behavior of tree swallows and their allies (genus Tachycineta), we reconstructed the phylogeny of... 
swallow phylogeny | Hirundinidae | Tachycineta | Bayesian | mitochondrial genes | DNA sequencing | Mitochondrial genes | Swallow phylogeny | BIOCHEMISTRY & MOLECULAR BIOLOGY | HYBRIDIZATION | EVOLUTIONARY BIOLOGY | EVOLUTION | GENETICS & HEREDITY | VERTEBRATES | CONFIDENCE | CYTOCHROME-B GENE | Songbirds - classification | Songbirds - genetics | Molecular Sequence Data | NADH Dehydrogenase - genetics | Electron Transport Complex IV - genetics | Phylogeny | Cytochrome b Group - genetics | RNA, Transfer, Met - genetics | Sequence Analysis, DNA | RNA, Transfer, Lys - genetics | DNA - genetics | DNA - chemistry | Animals | DNA, Mitochondrial - genetics | Bayes Theorem | Adenosine Triphosphatases - genetics | Evolution, Molecular
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14. Full Text An Endemic Radiation of Malagasy Songbirds Is Revealed by Mitochondrial DNA Sequence Data
by Alice Cibois and Beth Slikas and Thomas S. Schulenberg and Eric Pasquet
Evolution, ISSN 0014-3820, 6/2001, Volume 55, Issue 6, pp. 1198 - 1206
The bird fauna of Madagascar includes a high proportion of endemic species, particularly among passerine birds (Aves: Passeriformes). The endemic genera of... 
Biological taxonomies | Taxa | Adaptive radiation | Endemic species | Evolution | Birds | Phylogeny | Topology | Songbirds | Bird songs | molecular phylogeny | Madagascar | Sylviidae | Timaliidae | cytochrome b | Pycnonotidae | Cytochrome b | Molecular phylogeny | TOPOLOGIES | BIOGEOGRAPHY | GENUS | MTDNA SEQUENCES | EVOLUTIONARY RATES | PASSERINE BIRDS | EVOLUTIONARY BIOLOGY | SINGLE-ORIGIN | adaptive radiation | GENETICS & HEREDITY | TREE | ECOLOGY | Genetic Variation | Songbirds - classification | Likelihood Functions | Animals | DNA, Mitochondrial - genetics | Songbirds - genetics | Species Specificity | Base Sequence | DNA, Mitochondrial - radiation effects
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