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1. Full Text Cryo-EM structure of cardiac amyloid fibrils from an immunoglobulin light chain AL amyloidosis patient
by Swuec, Paolo and Lavatelli, Francesca and Tasaki, Masayoshi and Paissoni, Cristina and Rognoni, Paola and Maritan, Martina and Brambilla, Francesca and Milani, Paolo and Mauri, Pierluigi and Camilloni, Carlo and Palladini, Giovanni and Merlini, Giampaolo and Ricagno, Stefano and Bolognesi, Martino
Nature communications, ISSN 2041-1723, 12/2019, Volume 10, Issue 1, pp. 1269 - 1269
Science & Technology - Other Topics | Multidisciplinary Sciences | Science & Technology | Myocardium - immunology | Humans | Immunoglobulin Light-chain Amyloidosis - diagnosis | Male | Amyloid - ultrastructure | Amyloid - metabolism | Protein Aggregation, Pathological - pathology | Autopsy | Myocardium - metabolism | Protein Aggregation, Pathological - diagnosis | Protein Aggregation, Pathological - immunology | Immunoglobulin Light-chain Amyloidosis - immunology | Immunoglobulin Light Chains - ultrastructure | Myocardium - ultrastructure | Immunoglobulin Light Chains - immunology | Severity of Illness Index | Amino Acid Sequence | Myocardium - pathology | Protein Folding | Immunoglobulin Light Chains - metabolism | Cryoelectron Microscopy | Sequence Homology, Amino Acid | Sequence Alignment | Protein Conformation, beta-Strand | Amyloid - immunology | Immunoglobulin Light-chain Amyloidosis - metabolism | Immunoglobulin Light-chain Amyloidosis - pathology | Aged | Protein Aggregation, Pathological - metabolism | Heart | Residues | Immunoglobulins | Architecture | Cardiomyopathy | Fibrils | Organs | Chains | Electron microscopy | Conserved sequence | Light chains | Amyloid | Amyloidosis | Index Medicus
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2. Full Text Structure and Computation in Immunoreagent Design: From Diagnostics to Vaccines
by Gourlay, Louise and Peri, Claudio and Bolognesi, Martino and Colombo, Giorgio
Trends in biotechnology (Regular ed.), ISSN 0167-7799, 12/2017, Volume 35, Issue 12, pp. 1208 - 1220
in silico epitope discovery | structural vaccinology | antigen engineering | epitope-driven vaccine design | immunoreagents | Life Sciences & Biomedicine | Biotechnology & Applied Microbiology | Science & Technology | Virus Diseases - immunology | Drug Carriers - therapeutic use | Nanoparticles - chemistry | Humans | Vaccines - immunology | Virus Diseases - therapy | Vaccines - therapeutic use | Antigens - chemistry | Serologic Tests - methods | Bacterial Infections - therapy | Bacterial Infections - immunology | Virus Diseases - diagnosis | Epitopes - chemistry | Bacterial Infections - diagnosis | AIDS vaccines | Antigenic determinants | Antigens | Candidates | Peptides | Identification methods | Infections | Genomes | Vaccines | Nanoparticles | Design | Proteins | Engineering | Infectious diseases | Immunology | State-of-the-art reviews | E coli | Acquired immune deficiency syndrome--AIDS | Human immunodeficiency virus--HIV | Proteomics | Biomarkers | Biomolecules | Diagnostic systems | Bioinformatics | Cancer | Immune system | Index Medicus
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3. Full Text Ivermectin is a potent inhibitor of flavivirus replication specifically targeting NS3 helicase activity: New prospects for an old drug
by Mastrangelo, Eloise and Pezzullo, Margherita and De burghgraeve, Tine and Kaptein, Suzanne and Pastorino, Boris and Dallmeier, Kai and De lamballerie, Xavier and Neyts, Johan and Hanson, Alicia M and Frick, David N and Bolognesi, Martino and Milani, Mario
Journal of antimicrobial chemotherapy, ISSN 0305-7453, 08/2012, Volume 67, Issue 8, pp. 1884 - 1894
New use of existing drug | In silico docking | Flavivirus helicase inhibition | Structure-based drug design | Antiviral drug discovery | Pharmacology & Pharmacy | Infectious Diseases | Life Sciences & Biomedicine | Microbiology | Science & Technology | Biological and medical sciences | Medical sciences | Pharmacology. Drug treatments | Antibiotics. Antiinfectious agents. Antiparasitic agents | Virus Replication - drug effects | Antiviral Agents - pharmacology | Dengue Virus - drug effects | Encephalitis Viruses, Japanese - drug effects | Enzyme Inhibitors - pharmacology | Cercopithecus aethiops | Serine Endopeptidases - chemistry | Ivermectin - pharmacology | RNA Helicases - chemistry | Molecular Dynamics Simulation | RNA Helicases - antagonists & inhibitors | Encephalitis Viruses, Tick-Borne - drug effects | Viral Nonstructural Proteins - chemistry | Yellow fever virus - drug effects | Animals | Viral Nonstructural Proteins - antagonists & inhibitors | Vero Cells | Enzymes | Chemotherapy | Inhibitor drugs | Viral infections | Pharmaceuticals | Index Medicus | structure-based drug design | new use of existing drug | in silico docking | flavivirus helicase inhibition | Original Research | antiviral drug discovery
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4. Full Text Concurrent structural and biophysical traits link with immunoglobulin light chains amyloid propensity
by Oberti, Luca and Rognoni, Paola and Barbiroli, Alberto and Lavatelli, Francesca and Russo, Rosaria and Maritan, Martina and Palladini, Giovanni and Bolognesi, Martino and Merlini, Giampaolo and Ricagno, Stefano
Scientific reports, ISSN 2045-2322, 12/2017, Volume 7, Issue 1, pp. 16809 - 11
Science & Technology - Other Topics | Multidisciplinary Sciences | Science & Technology | Amyloidogenesis | X-ray crystallography | Somatic hypermutation | Immunoglobulins | Protein folding | Proteolysis | Light chains | Multiple myeloma | Amyloidosis | Hydrophobicity | Heart diseases | Crystallography | Index Medicus
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5. Full Text High‐light versus low‐light: Effects on paired photosystem ii supercomplex structural rearrangement in pea plants
by Grinzato, Alessandro and Albanese, Pascal and Marotta, Roberto and Swuec, Paolo and Saracco, Guido and Bolognesi, Martino and Zanotti, Giuseppe and Pagliano, Cristina
International journal of molecular sciences, ISSN 1661-6596, 11/2020, Volume 21, Issue 22, pp. 1 - 17
Photosystem II supercomplex | Plant thylakoid membranes | Light acclimation | Cryo‐electron microscopy | Biochemistry & Molecular Biology | Physical Sciences | Chemistry | Life Sciences & Biomedicine | Chemistry, Multidisciplinary | Science & Technology | Membranes | Stacking | Atoms & subatomic particles | Photosystem II | Trimers | Electron microscopy | Electrostatic properties | Thylakoid membranes | Proteins | Transmission electron microscopy | Photosystem | Maps | Microscopy | Chloroplasts | Light | Morphology | Antennas | Index Medicus | photosystem II supercomplex | plant thylakoid membranes | cryo-electron microscopy | light acclimation
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6. Full Text Conformational dynamics in crystals reveal the molecular bases for D76N beta-2 microglobulin aggregation propensity
by Le Marchand, Tanguy and De Rosa, Matteo and Salvi, Nicola and Sala, Benedetta Maria and Andreas, Loren B and Barbet-Massin, Emeline and Sormanni, Pietro and Barbiroli, Alberto and Porcari, Riccardo and Sousa Mota, Cristiano and De Sanctis, Daniele and Bolognesi, Martino and Emsley, Lyndon and Bellotti, Vittorio and Blackledge, Martin and Camilloni, Carlo and Pintacuda, Guido and Ricagno, Stefano
Nature communications, ISSN 2041-1723, 12/2018, Volume 9, Issue 1, pp. 1658 - 11
Science & Technology - Other Topics | Multidisciplinary Sciences | Science & Technology | Mutagenesis, Site-Directed | Humans | beta 2-Microglobulin - chemistry | Crystallography, X-Ray | Amyloidogenic Proteins - chemistry | Molecular Dynamics Simulation | Protein Folding | Point Mutation | Amyloidogenic Proteins - metabolism | Protein Aggregation, Pathological - pathology | Amyloidosis - genetics | Nuclear Magnetic Resonance, Biomolecular | beta 2-Microglobulin - metabolism | Protein Stability | Protein Aggregation, Pathological - genetics | beta 2-Microglobulin - genetics | Amyloidogenic Proteins - genetics | Amyloidogenesis | Nuclear magnetic resonance--NMR | Computer simulation | Crystals | Molecular dynamics | Agglomeration | Crystallography | Mutants | Proteins | X-ray crystallography | Dynamic tests | Dynamic stability | Computer applications | Destabilization | Index Medicus | Life Sciences
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7. Full Text Rational design of mutations that change the aggregation rate of a protein while maintaining its native structure and stability
by Camilloni, Carlo and Sala, Benedetta Maria and Sormanni, Pietro and Porcari, Riccardo and Corazza, Alessandra and De Rosa, Matteo and Zanini, Stefano and Barbiroli, Alberto and Esposito, Gennaro and Bolognesi, Martino and Bellotti, Vittorio and Vendruscolo, Michele and Ricagno, Stefano
Scientific reports, ISSN 2045-2322, 05/2016, Volume 6, Issue 1, pp. 25559 - 25559
Science & Technology - Other Topics | Multidisciplinary Sciences | Science & Technology | Magnetic resonance spectroscopy | Spectroscopy | Nuclear magnetic resonance--NMR | Resistant mutant | Amyloidosis | Mutation | Protein interaction | Index Medicus
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8. Full Text Sequence-Specific Transcription Factor NF-Y Displays Histone-like DNA Binding and H2B-like Ubiquitination
by Nardini, Marco and Gnesutta, Nerina and Donati, Giacomo and Gatta, Raffaella and Forni, Claudia and Fossati, Andrea and Vonrhein, Clemens and Moras, Dino and Romier, Christophe and Bolognesi, Martino and Mantovani, Roberto
Cell (Cambridge), ISSN 0092-8674, 01/2013, Volume 152, Issue 1-2, pp. 132 - 143
Biochemistry & Molecular Biology | Life Sciences & Biomedicine | Science & Technology | Cell Biology | Oligonucleotides - genetics | Protein Structure, Tertiary | Amino Acid Sequence | Oligonucleotides - chemistry | Promoter Regions, Genetic | CCAAT-Binding Factor - chemistry | Histones - chemistry | Humans | Molecular Sequence Data | Crystallography, X-Ray | DNA - metabolism | HSP72 Heat-Shock Proteins - genetics | DNA - genetics | Multiprotein Complexes - metabolism | DNA - chemistry | Multiprotein Complexes - chemistry | Oligonucleotides - metabolism | Sequence Alignment | Ubiquitination | Animals | CCAAT-Binding Factor - metabolism | Ubiquitin | Chromatin | Promoters (Genetics) | Analysis | DNA | Crystals | Chemical properties | Structure | DNA-ligand interactions | Index Medicus
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9. Full Text The Escherichia coli Lpt Transenvelope Protein Complex for Lipopolysaccharide Export Is Assembled via Conserved Structurally Homologous Domains
by Riccardo Villa and Alessandra M. Martorana and Suguru Okuda and Louise J. Gourlay and Marco Nardini and Paola Sperandeo and Gianni Dehò and Martino Bolognesi and Daniel Kahne and Alessandra Polissi
Journal of Bacteriology, ISSN 0021-9193, 03/2013, Volume 195, Issue 5, pp. 1100 - 1108
Life Sciences & Biomedicine | Microbiology | Science & Technology | Protein Structure, Tertiary | Carrier Proteins - metabolism | Bacterial Outer Membrane Proteins - metabolism | Biological Transport | Escherichia coli - metabolism | ATP-Binding Cassette Transporters - metabolism | Lipopolysaccharides - metabolism | Escherichia coli Proteins - metabolism | Membrane Proteins - metabolism | Escherichia coli - cytology | Mutation | Bacterial Outer Membrane Proteins - genetics | Physiological aspects | Research | Escherichia coli | Lipopolysaccharides | Membrane proteins | Membranes | E coli | Bacterial proteins | Lipids | Biochemistry | Permeability | Binding sites | Index Medicus
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