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BIOINFORMATICS, ISSN 1367-4803, 06/2019, Volume 35, Issue 11, pp. 1907 - 1915
Motivation: RNA viruses generate a cloud of genetic variants within each host. This cloud contains high-frequency genotypes, and many rare variants. The... 
FITNESS | BIAS | BIOCHEMICAL RESEARCH METHODS | RESTRICTION | EVOLUTION | MEMORY | GENOMES | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | MUTATION | MATHEMATICAL & COMPUTATIONAL BIOLOGY | SPECTRUM | CODON USAGE | VIRUSES
Journal Article
Journal Article
Molecular Biology and Evolution, ISSN 0737-4038, 04/2011, Volume 28, Issue 4, p. 1333
The genomes of many RNA viruses contain abundant secondary structures that have been shown to be important for understanding the evolution of noncoding regions... 
Proteins | Biological variation | Proteases | Human immunodeficiency virus--HIV | Amino acids | Genomes | Mutation | Ribonucleic acid--RNA
Journal Article
PLoS Pathogens, ISSN 1553-7366, 05/2015, Volume 11, Issue 5
Understanding how a pathogen colonizes and adapts to a new host environment is a primary aim in studying emerging infectious diseases. Adaptive mutations arise... 
Studies | Genotype & phenotype | Infectious diseases | Microscopy | Funding | Viruses | Population | Software | Genetic diversity | Mutation | Experiments
Journal Article
Journal Article
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 08/2012, Volume 109, Issue 34, p. E2294
  Based on structural data of the RNA-dependent RNA polymerase, rational targeting of key residues, and screens for Coxsackievirus B3 fidelity variants, we... 
Genotype & phenotype | Viruses | Genetic diversity | Mutation | RNA polymerase
Journal Article
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 09/2011, Volume 108, Issue 38, p. 16038
The error rate of RNA-dependent RNA polymerases (RdRp) affects the mutation frequency in a population of viral RNAs. Using chikungunya virus (CHIKV), we... 
Mosquitoes | Rodents | Viruses | Amino acids | Ribonucleic acid--RNA
Journal Article
Cell Host & Microbe, ISSN 1931-3128, 06/2014, Volume 15, Issue 6, pp. 706 - 716
Journal Article
Proceedings of the National Academy of Sciences, USA, ISSN 0027-8424, 09/2011, Volume 108, Issue 38, pp. 16038 - 16043
The error rate of RNA-dependent RNA polymerases (RdRp) affects the mutation frequency in a population of viral RNAs. Using chikungunya virus (CHIKV), we... 
Journal Article
Journal of Virology, ISSN 1098-5514, 02/2016, Volume 90, Issue 19, p. 4320
During the DENV-3 epidemic occurred in Havana in 2001-2002, severe disease was associated with the infection sequence DENV-1/DENV-3, whilst the sequence... 
Clinical Medicine | Medical and Health Sciences | Medicin och hälsovetenskap | Infektionsmedicin | Infectious Medicine | Klinisk medicin
Journal Article