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Journal Article
by Locke, Devin P and Hillier, Ladeana W and Warren, Wesley C and Worley, Kim C and Nazareth, Lynne V and Muzny, Donna M and Yang, Shiaw-Pyng and Wang, Zhengyuan and Chinwalla, Asif T and Minx, Pat and Mitreva, Makedonka and Cook, Lisa and Delehaunty, Kim D and Fronick, Catrina and Schmidt, Heather and Fulton, Lucinda A and Fulton, Robert S and Nelson, Joanne O and Magrini, Vincent and Pohl, Craig and Graves, Tina A and Markovic, Chris and Cree, Andy and Dinh, Huyen H and Hume, Jennifer and Kovar, Christie L and Fowler, Gerald R and Lunter, Gerton and Meader, Stephen and Heger, Andreas and Ponting, Chris P and Marques-Bonet, Tomas and Alkan, Can and Chen, Lin and Cheng, Ze and Kidd, Jeffrey M and Eichler, Evan E and White, Simon and Searle, Stephen and Vilella, Albert J and Chen, Yuan and Flicek, Paul and Ma, Jian and Raney, Brian and Suh, Bernard and Burhans, Richard and Herrero, Javier and Haussler, David and Faria, Rui and Fernando, Olga and Darré, Fleur and Farré, Doménec and Gazave, Elodie and Oliva, Meritxell and Navarro, Arcadi and Roberto, Roberta and Capozzi, Oronzo and Archidiacono, Nicoletta and Valle, Giuliano Della and Purgato, Stefania and Rocchi, Mariano and Konkel, Miriam K and Walker, Jerilyn A and Ullmer, Brygg and Batzer, Mark A and Smit, Arian F. A and Hubley, Robert and Casola, Claudio and Schrider, Daniel R and Hahn, Matthew W and Quesada, Victor and Puente, Xose S and Ordõez, Gonzalo R and Ĺpez-Otín, Carlos and Vinar, Tomas and Brejova, Brona and Ratan, Aakrosh and Harris, Robert S and Miller, Webb and Kosiol, Carolin and Lawson, Heather A and Taliwal, Vikas and Martins, André L and Siepel, Adam and Roychoudhury, Arindam and Ma, Xin and Degenhardt, Jeremiah and Bustamante, Carlos D and Gutenkunst, Ryan N and Mailund, Thomas and Dutheil, Julien Y and Hobolth, Asger and Schierup, Mikkel H and Ryder, Oliver A and Yoshinaga, Yuko and De Jong, Pieter J and Weinstock, George M and Rogers, Jeffrey and Mardis, Elaine R and Gibbs, Richard A and ...
Nature, ISSN 0028-0836, 01/2011, Volume 469, Issue 7331, pp. 529 - 533
Journal Article
by Worley, Kim C and Warren, Wesley C and Rogers, Jeffrey and Locke, Devin and Muzny, Donna M and Mardis, Elaine R and Weinstock, George M and Tardif, Suzette D and Aagaard, Kjersti M and Archidiacono, Nicoletta and Arul Rayan, Nirmala and Batzer, Mark A and Beal, Kathryn and Brejova, Brona and Capozzi, Oronzo and Capuano, Saverio B and Casola, Claudio and Chandrabose, Mimi M and Cree, Andrew and Diep Dao, Marvin and De Jong, Pieter J and Cruz-Herrera del Rosario, Ricardo and Delehaunty, Kim D and Dinh, Huyen H and Eichler, Evan E and Fitzgerald, Stephen and Flicek, Paul and Fontenot, Catherine C and Fowler, R. Gerald and Fronick, Catrina and Fulton, Lucinda A and Fulton, Robert S and Gabisi, Ramatu Ayiesha and Gerlach, Daniel and Graves, Tina A and Gunaratne, Preethi H and Hahn, Matthew W and Haig, David and Han, Yi and Harris, R. Alan and Herrero, Javier and Hillier, LaDeana W and Hubley, Robert and Hughes, Jennifer F and Hume, Jennifer and Jhangiani, Shalini N and Jorde, Lynn B and Joshi, Vandita and Karakor, Emre and Konkel, Miriam K and Kosiol, Carolin and LKovar, Christie and Kriventseva, Evgenia V and Lee, Sandra L and Lewis, Lora R and Liu, Yih-Shin and Lopez, John and Lopez-Otin, Carlos and Lorente-Galdos, Belen and Mansfield, Keith G and Marques-Bonet, Tomas and Minx, Patrick and Misceo, Doriana and Moncrieff, J. Scott and Morgan, Margaret B and Nazareth, Lynne V and Newsham, Irene and Nguyen, Ngoc Bich and Okwuonu, Geoffrey O and Prabhakar, Shyam and Perales, Lora and Pu, Ling-Ling and Puente, Xose S and Quesada, Victor and Ranck, Megan C and Raney, Brian J and Raveendran, Muthuswamy and Deiros, David Rio and Rocchi, Mariano and Rodriguez, David and Ross, Corinna and Ruffier, Magali and Ruiz, San Juana and Sajjadian, Saba and Santibanez, Jireh and Schrider, Daniel R and Searle, Steve and Skaletsky, Helen and Soibam, Benjamin and Smit, Arian F.A and Tennakoon, Jayantha B and Tomaska, Lubomir and Ullmer, Brygg and Vejnar, Charles E and Ventura, Mario and Vilella, Albert J and Vinar, Tomas and Vogel, Jan-Hinnerk and Walker, Jerilyn A and Wang, Qing and ... and Marmoset Genome Sequencing Anal Co and Marmoset Genome Sequencing and Analysis Consortium and The Marmoset Genome Sequencing and Analysis Consortium
Nature Genetics, ISSN 1061-4036, 2014, Volume 46, Issue 8, pp. 850 - 857
Journal Article
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 4/2014, Volume 111, Issue 16, pp. 5926 - 5931
Journal Article
BMC Genomics, ISSN 1471-2164, 08/2012, Volume 13, Issue 1, pp. 382 - 382
Journal Article
Information Processing Letters, ISSN 0020-0190, 06/2015, Volume 115, Issue 6-8, p. 635
  Hidden Markov models (HMMs) and their variants were successfully used for several sequence annotation tasks in bioinformatics. Traditionally, inference with... 
Studies | Algorithms | Optimization algorithms | Mathematical models | Markov analysis | Bioinformatics
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 4/2009, Volume 37, Issue 7, pp. e52 - e52
We have developed a novel method for estimating the parameters of hidden Markov models for gene finding in newly sequenced species. Our approach does not rely... 
DATABASE | BIOCHEMISTRY & MOLECULAR BIOLOGY | ALGORITHM | SEQUENCE | EUKARYOTES | PIPELINE | MODEL | IDENTIFICATION | PREDICTION | TOOL | Genome, Helminth | Markov Chains | Animals | Schistosoma japonicum - genetics | Caenorhabditis elegans - genetics | Schistosoma japonicum - classification | Genes, Helminth | Software | Phylogeny | Genomics - methods | Methods Online
Journal Article
Nature, ISSN 0028-0836, 07/2009, Volume 460, Issue 7253, pp. 345 - 351
Journal Article