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Journal Article
by Berger, Ashton C and Korkut, Anil and Kanchi, Rupa S and Hegde, Apurva M and Lenoir, Walter and Liu, Xiuping and Liu, Wenbin and Liu, Yuexin and Liu, Liang and Liu, Jia and Fan, Cheng and Fan, Huihui and Shen, Hui and Ravikumar, Visweswaran and Rao, Arvind and Schultz, Andre and Schultz, Nikolaus and Li, Xubin and Li, Wei and Li, Jun and Sumazin, Pavel and Williams, Felicia and Williams, Cecilia and Mestdagh, Pieter and Gunaratne, Preethi H and Yau, Christina and Bowlby, Reanne and Robertson, A. Gordon and Tiezzi, Daniel G and Wang, Zhining and Wang, Min and Wang, Jing and Wang, Linghua and Wang, Jioajiao and Wang, Timothy and Wang, Chen and Cherniack, Andrew D and Godwin, Eryn M and Godwin, Andrew K and Kuderer, Nicole M and Rader, Janet S and Zuna, Rosemary and Zuna, Rosemary E and Sood, Anil K and Sood, Anil and Lazar, Alexander J and Ojesina, Akinyemi I and Adebamowo, Clement and Adebamowo, Sally N and Baggerly, Keith A and Chen, Amy and Chen, Chu and Chen, Ting-Wen and Chiu, Hua-Sheng and Lefever, Steve and MacKenzie, Karen and Orsulic, Sandra and Roszik, Jason and Shelley, Carl Simon and Song, Qianqian and Vellano, Christopher P and Wentzensen, Nicolas and Caesar-Johnson, Samantha J and Demchok, John A and Felau, Ina and Kasapi, Melpomeni and Ferguson, Martin L and Hutter, Carolyn M and Sofia, Heidi J and Tarnuzzer, Roy and Yang, Hannah and Yang, Liming and Yang, Ian and Yang, Ju Dong and Zenklusen, Jean C and Zhang, Wei and Zhang, Hongxin and Zhang, Hailei and Zhang, Jiashan (Julia) and Zhang, Lizhi and Zhang, Jiexin and Zhang, Hongzheng and Chudamani, Sudha and Lolla, Laxmi and Naresh, Rashi and Pihl, Todd and Sun, Qiang and Sun, Yichao and Wan, Yunhu and Wu, Ye and Cho, Juok and DeFreitas, Timothy and Frazer, Scott and Gehlenborg, Nils and Getz, Gad and Heiman, David I and Kim, Jaegil and Lawrence, Michael S and Lin, Pei and Meier, Sam and ... and Canc Genome Atlas Res Network and Cancer Genome Atlas Research Network and Argonne National Lab. (ANL), Argonne, IL (United States). Advanced Photon Source (APS) and Proteomik och nanobioteknologi and Cellulär och klinisk proteomik and Skolan för bioteknologi (BIO) and Proteinvetenskap and KTH and Skolan för kemi, bioteknologi och hälsa (CBH)
Cancer Cell, ISSN 1535-6108, 04/2018, Volume 33, Issue 4, pp. 690 - 705.e9
Journal Article
by Ding, Li and Bailey, Matthew and Bailey, Matthew H and Porta-Pardo, Eduard and Thorsson, Vesteinn and Colaprico, Antonio and Bertrand, Denis and Gibbs, David L and Gibbs, Richard A and Weerasinghe, Amila and Huang, Kuan-lin and Tokheim, Collin and Cortés-Ciriano, Isidro and Jayasinghe, Reyka and Chen, Amy and Chen, Feng and Chen, Chu and Yu, Lihua and Sun, Qiang and Sun, Yichao and Sun, Sam and Olsen, Catharina and Kim, Jaegil and Taylor, Barry S and Taylor, Alison M and Cherniack, Andrew D and Akbani, Rehan and Suphavilai, Chayaporn and Nagarajan, Niranjan and Stuart, Joshua M and Mills, Gordon B and Wyczalkowski, Matthew A and Vincent, Benjamin G and Hutter, Carolyn M and Zenklusen, Jean C and Zenklusen, Jean Claude and Hoadley, Katherine A and Wendl, Michael C and Shmulevich, llya and Shmulevich, Ilya and Lazar, Alexander J and Wheeler, David A and Getz, Gad and Caesar-Johnson, Samantha J and Demchok, John A and Felau, Ina and Kasapi, Melpomeni and Ferguson, Martin L and Sofia, Heidi J and Tarnuzzer, Roy and Wang, Zhining and Wang, Min and Wang, Jing and Wang, Jioajiao and Wang, Timothy and Wang, Linghua and Yang, Ju Dong and Yang, Hannah and Yang, Ian and Yang, Liming and Zhang, Wei and Zhang, Hongzheng and Zhang, Hailei and Zhang, Hongxin and Zhang, Jiexin and Zhang, Jiashan (Julia) and Zhang, Lizhi and Chudamani, Sudha and Liu, Yuexin and Liu, Xiuping and Liu, Wenbin and Liu, Jia and Lolla, Laxmi and Naresh, Rashi and Pihl, Todd and Wan, Yunhu and Wu, Ye and Cho, Juok and DeFreitas, Timothy and Frazer, Scott and Gehlenborg, Nils and Heiman, David I and Lawrence, Michael S and Lin, Pei and Meier, Sam and Noble, Michael S and Saksena, Gordon and Voet, Doug and Bernard, Brady and Chambwe, Nyasha and Dhankani, Varsha and Knijnenburg, Theo and Kramer, Roger and Leinonen, Kalle and Miller, Michael and Miller, Christopher A and Miller, Judy and Reynolds, Sheila and Broom, Bradley M and Hegde, Apurva M and ... and Cancer Genome Atlas Res Network and Cancer Genome Atlas Research Network and Argonne National Lab. (ANL), Argonne, IL (United States). Advanced Photon Source (APS)
Cell, ISSN 0092-8674, 04/2018, Volume 173, Issue 2, pp. 305 - 320.e10
Journal Article
Symbiosis, ISSN 0334-5114, 6/2014, Volume 63, Issue 2, pp. 71 - 78
The sea anemone Bartholomea annulata is an ecologically important member of Caribbean coral reefs which host a variety of symbiotic crustacean associates.... 
Life Sciences | Shrimp symbionts | Microbiology | Fireworm | Hermodice | Ecology | Alpheus | Evolutionary Biology | Developmental Biology | Plant Sciences | Anemone | Bartholomea | BEHAVIOR | HERMODICE-CARUNCULATA PALLAS | CLEANER SHRIMP | MICROBIOLOGY | PERICLIMENES-ANTHOPHILUS | BARTHOLOMEA-ANNULATA | REEF | EVOLUTION | GIANT SEA-ANEMONES | FLORIDA-KEYS | AMPHINOMID POLYCHAETE | Reefs
Journal Article
by Kahles, André and Lehmann, Kjong-Van and Toussaint, Nora C and Hüser, Matthias and Stark, Stefan G and Sachsenberg, Timo and Stegle, Oliver and Kohlbacher, Oliver and Sander, Chris and Caesar-Johnson, Samantha J and Demchok, John A and Felau, Ina and Kasapi, Melpomeni and Ferguson, Martin L and Hutter, Carolyn M and Sofia, Heidi J and Tarnuzzer, Roy and Wang, Jing and Wang, Timothy and Wang, Min and Wang, Jioajiao and Wang, Zhining and Wang, Linghua and Yang, Ju Dong and Yang, Liming and Yang, Ian and Yang, Hannah and Zenklusen, Jean C and Zhang, Jiashan (Julia) and Zhang, Hailei and Zhang, Wei and Zhang, Jiexin and Zhang, Hongxin and Zhang, Lizhi and Zhang, Hongzheng and Chudamani, Sudha and Liu, Jia and Liu, Yuexin and Liu, Xiuping and Liu, Wenbin and Lolla, Laxmi and Naresh, Rashi and Pihl, Todd and Sun, Qiang and Sun, Yichao and Wan, Yunhu and Wu, Ye and Cho, Juok and DeFreitas, Timothy and Frazer, Scott and Gehlenborg, Nils and Getz, Gad and Heiman, David I and Kim, Jaegil and Lawrence, Michael S and Lin, Pei and Meier, Sam and Noble, Michael S and Saksena, Gordon and Voet, Doug and Bernard, Brady and Chambwe, Nyasha and Dhankani, Varsha and Knijnenburg, Theo and Kramer, Roger and Leinonen, Kalle and Miller, Christopher A and Miller, Michael and Miller, Judy and Reynolds, Sheila and Shmulevich, Ilya and Thorsson, Vesteinn and Akbani, Rehan and Broom, Bradley M and Hegde, Apurva M and Ju, Zhenlin and Kanchi, Rupa S and Korkut, Anil and Li, Jun and Li, Wei and Liang, Han and Ling, Shiyun and Lu, Yiling and Mills, Gordon B and Ng, Kwok-Shing and Rao, Arvind and Ryan, Michael and Weinstein, John N and Abeshouse, Adam and Armenia, Joshua and Chakravarty, Debyani and Chatila, Walid K and de Bruijn, Ino and Gao, Galen F and Gao, Jianjiong and Gross, Benjamin E and Heins, Zachary J and Kundra, Ritika and La, Konnor and Ladanyi, Marc and ... and Canc Genome Atlas Res Network and Cancer Genome Atlas Research Network
Cancer Cell, ISSN 1535-6108, 08/2018, Volume 34, Issue 2, pp. 211 - 224.e6
Our comprehensive analysis of alternative splicing across 32 The Cancer Genome Atlas cancer types from 8,705 patients detects alternative splicing events and... 
tumor-specific splicing | GTEx | alternative splicing | MS proteomics | neoantigens | TCGA | exome | RNA-seq | immunotherapy | splicing QTL | cancer | CPTAC | TCGA Pan-Cancer Atlas | immunoediting | BREAST-CANCER | COWDEN-SYNDROME | MET INHIBITORS | VARIANTS | ONCOLOGY | PTEN | OVARIAN-CANCER | IDENTIFICATION | SOMATIC MUTATIONS