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by Robertson, A. Gordon and Kim, Jaegil and Al-Ahmadie, Hikmat and Bellmunt, Joaquim and Guo, Guangwu and Cherniack, Andrew D and Hinoue, Toshinori and Laird, Peter W and Hoadley, Katherine A and Akbani, Rehan and Castro, Patricia and Castro, Mauro A.A and Gibb, Ewan A and Kanchi, Rupa S and Gordenin, Dmitry A and Shukla, Sachet A and Sanchez-Vega, Francisco and Hansel, Donna E and Czerniak, Bogdan A and Reuter, Victor E and Su, Xiaoping and de Sa Carvalho, Benilton and Chagas, Vinicius S and Mungall, Andrew J and Mungall, Karen L and Sadeghi, Sara and Pedamallu, Chandra Sekhar and Lu, Yiling and Klimczak, Leszek J and Zhang, Jiashan (Julia) and Zhang, Jiexin and Choo, Caleb and Ojesina, Akinyemi I and Bullman, Susan and Leraas, Kristen M and Lichtenberg, Tara M and Wu, Ye and Wu, Catherine J and Schultz, Nikolaus and Schultz, Nicholaus and Getz, Gad and Meyerson, Matthew and Mills, Gordon B and McConkey, David J and Albert, Monique and Alexopoulou, Iakovina and Ally, Adrian and Antic, Tatjana and Aron, Manju and Balasundaram, Miruna and Bartlett, John and Baylin, Stephen B and Beaver, Allison and Birol, Inanc and Boice, Lori and Bootwalla, Moiz S and Bowen, Jay and Bowlby, Reanne and Brooks, Denise and Broom, Bradley M and Bshara, Wiam and Burks, Eric and Cárcano, Flavio M and Carlsen, Rebecca and Carvalho, Benilton S and Carvalho, Andre L and Castle, Eric P and Catto, James W and Chesla, David W and Chuah, Eric and Chudamani, Sudha and Cortessis, Victoria K and Cottingham, Sandra L and Crain, Daniel and Curley, Erin and Daneshmand, Siamak and Demchok, John A and Dhalla, Noreen and Djaladat, Hooman and Eckman, John and Egea, Sophie C and Engel, Jay and Felau, Ina and Ferguson, Martin L and Gardner, Johanna and Gastier-Foster, Julie M and Gerken, Mark and Gomez-Fernandez, Carmen R and Harr, Jodi and Hartmann, Arndt and Herbert, Lynn M and Ho, Thai H and Holt, Robert A and Hutter, Carolyn M and Jones, Steven J.M and Jorda, Merce and Kahnoski, Richard J and Kasaian, Katayoon and Kwiatkowski, David J and Lai, Phillip H and ... and TCGA Res Network and TCGA Research Network
Cell, ISSN 0092-8674, 10/2017, Volume 171, Issue 3, pp. 540 - 556.e25
Journal Article
by Shen, Hui and Shih, Juliann and Hollern, Daniel P and Hollern, Daniel and Wang, Zhining and Wang, Linghua and Bowlby, Reanne and Tickoo, Satish K and Thorsson, Vésteinn and Thorsson, Vesteinn and Mungall, Andrew J and Newton, Yulia and Hegde, Apurva M and Armenia, Joshua and Sánchez-Vega, Francisco and Pluta, John and Pyle, Louise C and Mehra, Rohit and Reuter, Victor E and Godoy, Guilherme and Jones, Jeffrey and Jones, Steven J.M and Jones, Corbin D and Shelley, Carl S and Feldman, Darren and Feldman, Darren R and Vidal, Daniel O and Lessel, Davor and Kulis, Tomislav and Cárcano, Flavio M and Leraas, Kristen M and Lichtenberg, Tara M and Brooks, Denise and Cherniack, Andrew D and Cho, Juok and Heiman, David I and Kasaian, Katayoon and Liu, Jia and Liu, Wenbin and Liu, Minwei and Noble, Michael S and Xi, Liu and Zhang, Jiashan (Julia) and Zhang, Jiashan and Zhang, Hailei and Zhou, Wanding and ZenKlusen, Jean C and Hutter, Carolyn M and Felau, Ina and Schultz, Nikolaus and Getz, Gad and Meyerson, Matthew and Stuart, Joshua M and Wheeler, David A and Wheeler, David and Hughes, Daniel and Covington, Kyle and Jayaseelan, Joy C and Korchina, Viktoriya and Lewis, Lora and Hu, Jianhong and Doddapaneni, HarshaVardhan and Muzny, Donna and Gibbs, Richard and Hoadley, Katherine A and Vincent, Benjamin G and Chai, Shengjie and Smith, Christof C and Auman, J. Todd and Shi, Yan and Meng, Shaowu and Skelly, Tara and Tan, Donghui and Veluvolu, Umadevi and Mieczkowski, Piotr A and Wilkerson, Matthew D and Balu, Saianand and Bodenheimer, Tom and Hoyle, Alan P and Jefferys, Stuart R and Mose, Lisle E and Simons, Janae V and Soloway, Matthew G and Roach, Jeffrey and Parker, Joel S and Hayes, D. Neil and Perou, Amy H and Perou, Charles M and Saksena, Gordon and Cibulskis, Carrie and Schumacher, Steven E and Beroukhim, Rameen and Gabriel, Stacey B and Ally, Adrian and Balasundaram, Miruna and Carlsen, Rebecca and Cheung, Dorothy and Chuah, Eric and Dhalla, Noreen and Holt, Robert A and ... and Canc Genome Atlas Res Network and Cancer Genome Atlas Research Network
Cell Reports, ISSN 2211-1247, 06/2018, Volume 23, Issue 11, pp. 3392 - 3406
We studied 137 primary testicular germ cell tumors (TGCTs) using high-dimensional assays of genomic, epigenomic, transcriptomic, and proteomic features. These... 
exome sequencing | miR-375 | KIT | DNA methylation | seminoma | nonseminoma | copy number | testicular germ cell tumors | The Cancer Genome Atlas | ENDOGENOUS RETROVIRUSES | KIT GENE | ADOLESCENTS | HIGH-RESOLUTION | MUTATIONS | SEMINOMA | EXPRESSION | HUMAN CANCER | GENOME | CARCINOMA IN-SITU | CELL BIOLOGY | Index Medicus
Journal Article
Oncotarget, ISSN 1949-2553, 04/2018, Volume 9, Issue 29, pp. 20386 - 20398
Metabolic reprogramming is one of the hallmarks of cancer. The hyperglycolytic phenotype is often associated with the overexpression of metabolism-associated... 
Immunohistochemistry | Testicular germ cell tumors | Monocarboxylate transporter | Testicular neoplasms | Warburg effect
Journal Article
Frontiers in Endocrinology, ISSN 1664-2392, 06/2019, Volume 10, pp. 417 - 417
Testicular Germ Cell Tumors (TGCTs) are a rare group of neoplasms and the most common solid malignancy arising in young male adults. Despite the good response... 
Proteins | Physiological aspects | Glucose metabolism | Chemotherapy | Germ cell tumors | Cancer | immunohistochemistry | testicular neoplasms | metabolic reprogramming | testicular germ cell tumors | Warburg effect
Journal Article
by Radovich, Milan and Pickering, Curtis R and Felau, Ina and Ha, Gavin and Zhang, Hailei and Zhang, Jiashan and Zhang, Jiexin and Jo, Heejoon and Hoadley, Katherine A and Anur, Pavana and McLellan, Mike and Bowlby, Reanne and Matthew, Thomas and Danilova, Ludmila and Hegde, Apurva M and Kim, Jaegil and Leiserson, Mark D.M and Sethi, Geetika and Lu, Yiling and Lu, Charles and Ryan, Michael and Su, Xiaoping and Cherniack, Andrew D and Robertson, Gordon and Akbani, Rehan and Spellman, Paul and Weinstein, John N and Hayes, D. Neil and Raphael, Ben and Lichtenberg, Tara and Leraas, Kristen and Zenklusen, Jean Claude and Ally, Adrian and Appelbaum, Elizabeth L and Auman, J. Todd and Balasundaram, Miruna and Balu, Saianand and Behera, Madhusmita and Beroukhim, Rameen and Berrios, Mario and Blandino, Giovanni and Bodenheimer, Tom and Bootwalla, Moiz S and Bowen, Jay and Brooks, Denise and Carcano, Flavio M and Carlsen, Rebecca and Carvalho, Andre L and Castro, Patricia and Chalabreysse, Lara and Chin, Lynda and Cho, Juok and Choe, Gina and Chuah, Eric and Chudamani, Sudha and Cibulskis, Carrie and Cope, Leslie and Cordes, Matthew G and Crain, Daniel and Curley, Erin and Defreitas, Timothy and Demchok, John A and Detterbeck, Frank and Dhalla, Noreen and Dienemann, Hendrik and Edenfield, W. Jeff and Facciolo, Francesco and Ferguson, Martin L and Frazer, Scott and Fronick, Catrina C and Fulton, Robert S and Fulton, Lucinda A and Gabriel, Stacey B and Gardner, Johanna and Gastier-Foster, Julie M and Gehlenborg, Nils and Gerken, Mark and Getz, Gad and Heiman, David I and Hobensack, Shital and Holbrook, Andrea and Holt, Robert A and Hoyle, Alan P and Hutter, Carolyn M and Ittmann, Michael and Jefferys, Stuart R and Jones, Corbin D and Jones, Steven J.M and Kasaian, Katayoon and Kimes, Patrick K and Lai, Phillip H and Laird, Peter W and Lawrence, Michael S and Lin, Pei and Liu, Jia and Lolla, Laxmi and Ma, Yussanne and Maglinte, Dennis T and Mallery, David and Mardis, Elaine R and ... and Canc Genome Atlas Network and Cancer Genome Atlas Network
Cancer Cell, ISSN 1535-6108, 02/2018, Volume 33, Issue 2, pp. 244 - 258.e10
Journal Article
Clinical Medicine Insights: Oncology, 01/2013, Volume 7
Primary synovial sarcoma (SS) of the kidney is a rare neoplasm and its presenting features are similar to other common renal tumors, making early diagnosis... 
Journal Article
Clinical Medicine Insights: Oncology, ISSN 1179-5549, 10/2013, Volume 2013, Issue 7, pp. 257 - 262
Primary synovial sarcoma (SS) of the kidney is a rare neoplasm and its presenting features are similar to other common renal tumors, making early diagnosis... 
Chemotherapy | SYT-SSX fusion protein | Synovial sarcoma | Kidney neoplasms | Immunohistochemistry | Prognosis | Diagnosis | Sarcoma
Journal Article
by Hmeljak, Julija and Sanchez-Vega, Francisco and Hoadley, Katherine A and Shih, Juliann and Stewart, Chip and Heiman, David and Tarpey, Patrick and Danilova, Ludmila and Drill, Esther and Gibb, Ewan A and Bowlby, Reanne and Kanchi, Rupa and Osmanbeyoglu, Hatice U and Sekido, Yoshitaka and Takeshita, Jumpei and Newton, Yulia and Graim, Kiley and Gupta, Manaswi and Gay, Carl M and Diao, Lixia and Gibbs, David L and Thorsson, Vesteinn and Iype, Lisa and Kantheti, Havish and Severson, David T and Ravegnini, Gloria and Desmeules, Patrice and Jungbluth, Achim A and Travis, William D and Dacic, Sanja and Chirieac, Lucian R and Galateau-Sallé, Françoise and Fujimoto, Junya and Husain, Aliya N and Silveira, Henrique C and Rusch, Valerie W and Rintoul, Robert C and Pass, Harvey and Kindler, Hedy and Zauderer, Marjorie G and Kwiatkowski, David J and Bueno, Raphael and Tsao, Anne S and Creaney, Jenette and Lichtenberg, Tara and Leraas, Kristen and Bowen, Jay and Felau, Ina and Zenklusen, Jean Claude and Akbani, Rehan and Cherniack, Andrew D and Byers, Lauren A and Noble, Michael S and Fletcher, Jonathan A and Robertson, A. Gordon and Shen, Ronglai and Aburatani, Hiroyuki and Robinson, Bruce W and Campbell, Peter and Ladanyi, Marc and Ally, Adrian and Anur, Pavana and Armenia, Joshua and Auman, J. Todd and Balasundaram, Miruna and Balu, Saianand and Baylin, Stephen B and Becich, Michael and Behrens, Carmen and Beroukhim, Rameen and Bielski, Craig and Bodenheimer, Tom and Bootwalla, Moiz S and Brooks, Denise and Byers, Lauren A and Cárcano, Flávio M and Carlsen, Rebecca and Carvalho, Andre L and Cheung, Dorothy and Chirieac, Lucian and Cho, Juok and Chuah, Eric and Chudamani, Sudha and Cibulskis, Carrie and Cope, Leslie and Crain, Daniel and Curley, Erin and De Rienzo, Assunta and DeFreitas, Timothy and Demchok, John A and Dhalla, Noreen and Dhir, Rajiv and Feldman, Michael and Ferguson, Martin L and Fukuda, Shiro and Gabriel, Stacey B and Sallé, Françoise Galateau and Gao, Jianjiong and Gardner, Johanna and Gastier-Foster, Julie M and ... and TCGA Res Network and TCGA Research Network
Cancer Discovery, ISSN 2159-8274, 12/2018, Volume 8, Issue 12, pp. 1549 - 1565
Malignant pleural mesothelioma (MPM) is a highly lethal cancer of the lining of the chest cavity. To expand our understanding of MPM, we conducted a... 
CELLS | IMMUNE-CHECKPOINT | GENE | ONCOLOGY | TUMOR-SUPPRESSOR | WHOLE-EXOME | MUTATIONS | CANCER | EXPRESSION | BAP1 | DELETION
Journal Article
Journal Article