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Bioinformatics, ISSN 1367-4803, 08/2019, Volume 35, Issue 15, pp. 2668 - 2670
Abstract Motivation Stirling numbers enter into the calculation of several population genetics statistics, including Fu’s Fs. However, as alignments become... 
NEUTRALITY | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | BIOCHEMICAL RESEARCH METHODS | MATHEMATICAL & COMPUTATIONAL BIOLOGY | STATISTICAL TESTS | MUTATIONS | HITCHHIKING
Journal Article
FRONTIERS IN MICROBIOLOGY, ISSN 1664-302X, 06/2019, Volume 10, p. 1447
Journal Article
Scientific reports, ISSN 2045-2322, 04/2018, Volume 8, Issue 1, pp. 6056 - 1
A correction to this article has been published and is linked from the HTML and PDF versions of this paper. The error has been fixed in the paper. 
Clinical isolates
Journal Article
Scientific Reports, ISSN 2045-2322, 12/2018, Volume 8, Issue 1, pp. 12785 - 10
The objective of this study was to correlate resistance mutations of extended spectrum beta-lactamases (ESBL) and AmpC beta-lactamases and virulence factors... 
SPECTRUM-BETA-LACTAMASE | CTX-M | IN-VITRO | THERAPY | PIPERACILLIN-TAZOBACTAM | CARBAPENEMS | MULTIDISCIPLINARY SCIENCES | VIRULENCE | ANTIMICROBIAL RESISTANCE | BLOOD-STREAM INFECTIONS | ENTEROBACTERIACEAE | Mortality | Piperacillin-tazobactam | Genomes | β-Lactamase | Ceftriaxone | Bacteremia | Tazobactam | E coli | Virulence factors | Piperacillin | Neck | Mutation | Carbapenems
Journal Article
Bioinformatics (Oxford, England), 12/2018
Stirling numbers enter into the calculation of several population genetics statistics, including Fu's Fs. However, as alignments become large (>∼50 sequences),... 
Journal Article
Proceedings of the National Academy of Sciences, USA, ISSN 0027-8424, 04/2016, Volume 113, Issue 15, pp. 4182 - 4182
Type 1 pili (T1P) are major virulence factors for uropathogenic Escherichia coli (UPEC), which cause both acute and recurrent urinary tract infections. T1P... 
Journal Article
Genome Announcements, ISSN 2169-8287, 2017, Volume 5, Issue 18
is the most common bacterium causing urinary tract infections in humans. We report here the complete genome sequence of the uropathogenic strain NU14, a... 
Journal Article
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 04/2016, Volume 113, Issue 15, p. 4182
  Type 1 pili (T1P) are major virulence factors for uropathogenic Escherichia coli (UPEC), which cause both acute and recurrent urinary tract infections. T1P... 
E coli | Mutagenesis | Genomics | Mutation | Deoxyribonucleic acid--DNA | Environmental conditions
Journal Article
Proceedings of the National Academy of Sciences, USA, ISSN 0027-8424, 09/2016, Volume 113, Issue 38, pp. 10690 - 10690
Infections due to clonal expansion of highly virulent bacterial strains are clear and present threats to human and animal health. Association of genetic... 
Journal Article
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 09/2016, Volume 113, Issue 38, p. 10690
  Infections due to clonal expansion of highly virulent bacterial strains are clear and present threats to human and animal health. Association of genetic... 
Mutagenesis | Cloning | Genetics | Bacteria | Genomes | Mutation
Journal Article
Genome Announcements, ISSN 2169-8287, 01/2018, Volume 6, Issue 1
is a bioluminescent symbiont of fish of the family. Here, we present the full-genome sequence of strain JS01, a strain isolated from a nonluminescent sp. squid... 
Genomes | Deoxyribonucleic acid--DNA
Journal Article
PLoS Pathogens, ISSN 1553-7366, 08/2015, Volume 11, Issue 8
  Recurrent urinary tract infections (UTIs) caused by uropathogenic E. coli (UPEC) are common and morbid infections with limited therapeutic options. Previous... 
Medical research | Bacterial infections | Bladder | Infections | Experiments | Urinary tract diseases | Proteins | Scholarships & fellowships | Infectious diseases | Antibiotics | E coli | Microscopy | Womens health | Urogenital system
Journal Article
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 09/2013, Volume 110, Issue 39, p. 15530
  Chaperone-usher pathway pili are a widespread family of extracellular, Gram-negative bacterial fibers with important roles in bacterial pathogenesis. Type 1... 
Biofilms | E coli | Pathogenesis | Cells | Binding sites | Urinary tract diseases
Journal Article
Genome Announcements, ISSN 2169-8287, 03/2017, Volume 5, Issue 11
Here, we report the complete genome sequence of the strain JS95, isolated from a patient with necrotizing fasciitis. The streptococcal invasion locus ( ), the... 
Journal Article
Genome Announcements, 01/2018, Volume 6, Issue 1
ABSTRACTWe sequenced the first blaVIM-1-positive Klebsiella pneumoniae strain isolated in Singapore. The isolate belongs to multilocus sequence type 2542... 
Antimicrobial agents | Genomes | Drug resistance | Laboratories | Genes
Journal Article
Genome announcements, ISSN 2169-8287, 01/2018, Volume 6, Issue 1
We sequenced the first -positive strain isolated in Singapore. The isolate belongs to multilocus sequence type 2542 (ST2542), and was the first gene in an... 
Journal Article
Genome Announcements, ISSN 2169-8287, 01/2018, Volume 6, Issue 1
ABSTRACTWe sequenced the firstblaVIM-1-positiveKlebsiella pneumoniaestrain isolated in Singapore. The isolate belongs to multilocus sequence type 2542... 
Journal Article
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