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FRONTIERS IN GENETICS, ISSN 1664-8021, 08/2019, Volume 10
Bacterial-host interactions are non-linear and actually threefold, involving significant selection through predatory lytic bacteriophages in the host... 
population structure | SEQUENCE | GENETICS & HEREDITY | host | TOXINS | evolution | phage | OUTBREAK | ENGLAND | Escherichia coli O157:H7 | Research | Microbiota (Symbiotic organisms) | Escherichia coli | Biological diversity
Journal Article
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 09/2018, Volume 115, Issue 37, p. E8583
Journal Article
Journal Article
Clinical Infectious Diseases, ISSN 1058-4838, 08/2015, Volume 61, Issue 3, p. 305
  National surveillance of gastrointestinal pathogens, such as Shiga toxin-producing Escherichia coli O157 (STEC O157), is key to rapidly identifying linked... 
E coli | Phylogenetics | Toxins | Genomes | Epidemiology | Public health
Journal Article
PLoS Genetics, ISSN 1553-7390, 06/2018, Volume 14, Issue 6, p. e1007410
Journal Article
Journal Article
PLoS ONE, ISSN 1932-6203, 05/2014, Volume 9, Issue 5, p. e98103
Journal Article
Emerging Infectious Diseases, ISSN 1080-6040, 12/2017, Volume 23, Issue 12, pp. 1966 - 1973
Journal Article
by Ruibal, Paula and Oestereich, Lisa and Ludtke, Anja and Becker-Ziaja, Beate and Wozniak, David M and Kerber, Romy and Korva, Miša and Cabeza-Cabrerizo, Mar and Bore, Joseph A and Koundouno, Fara Raymond and Duraffour, Sophie and Weller, Romy and Thorenz, Anja and Cimini, Eleonora and Viola, Domenico and Agrati, Chiara and Repits, Johanna and Afrough, Babak and Cowley, Lauren A and Ngabo, Didier and Hinzmann, Julia and Mertens, Marc and Vitoriano, Inês and Logue, Christopher H and Boettcher, Jan Peter and Pallasch, Elisa and Sachse, Andreas and Bah, Amadou and Nitzsche, Katja and Kuisma, Eeva and Michel, Janine and Holm, Tobias and Zekeng, Elsa-Gayle and Garcia-Dorival, Isabel and Wolfel, Roman and Stoecker, Kilian and Fleischmann, Erna and Strecker, Thomas and Di Caro, Antonino and Avsic-Zupanc, Tatjana and Kurth, Andreas and Meschi, Silvia and Mely, Stephane and Newman, Edmund and Bocquin, Anne and Kis, Zoltan and Kelterbaum, Anne and Molkenthin, Peter and Carletti, Fabrizio and Portmann, Jasmine and Wolff, Svenja and Castilletti, Concetta and Schudt, Gordian and Fizet, Alexandra and Ottowell, Lisa J and Herker, Eva and Jacobs, Thomas and Kretschmer, Birte and Severi, Ettore and Ouedraogo, Nobila and Lago, Mar and Negredo, Anabel and Franco, Leticia and Anda, Pedro and Schmiedel, Stefan and Kreuels, Benno and Wichmann, Dominic and Addo, Marylyn M and Lohse, Ansgar W and De Clerck, Hilde and Nanclares, Carolina and Jonckheere, Sylvie and Van Herp, Michel and Sprecher, Armand and Xiaojiang, Gao and Carrington, Mary and Miranda, Osvaldo and Castro, Carlos M and Gabriel, Martin and Drury, Patrick and Formenty, Pierre and Diallo, Boubacar and Koivogui, Lamine and Magassouba, N'Faly and Carroll, Miles W and Gunther, Stephan and Munoz-Fontela, Cesar
Nature, ISSN 0028-0836, 05/2016, Volume 533, Issue 7601, pp. 100 - 104
Journal Article
Emerging Infectious Diseases, ISSN 1080-6040, 11/2016, Volume 22, Issue 11, pp. 1948 - 1952
Journal Article
Emerging Infectious Diseases, ISSN 1080-6040, 12/2017, Volume 23, Issue 12, pp. 1958 - 1965
Journal Article
mBio, ISSN 2150-7511, 07/2018, Volume 9, Issue 4
ABSTRACTExperiments using bacteriophage (phage) to infect bacterial strains have helped define some basic genetic concepts in microbiology, but our... 
Journal Article
Journal of Medical Microbiology, ISSN 0022-2615, 06/2018, Volume 67, Issue 6, pp. 884 - 888
We compared the genomes of 60 isolates of enteroinvasive Escherichia coli (EIEC) in order to better understand the step-wise evolutionary process from... 
Insertion sequences | Enteroinvasive Escherichia coli | Whole genome sequencing | Invasion plasmid | STRAINS | CONVERGENT EVOLUTION | ANTIVIRULENCE GENES | LARGE VIRULENCE PLASMID | MICROBIOLOGY | IDENTIFICATION | whole genome sequencing | invasion plasmid | SHIGELLA-FLEXNERI | insertion sequences | SEQUENCE | MOLECULAR EVOLUTIONARY HISTORY | CLONES | INSIGHTS
Journal Article
2017
Background Shiga toxin producing Escherichia coli (STEC) O157 causes severe gastrointestinal disease and haemolytic uremic syndrome, and has a major impact on... 
e. coli | Escherichia coli | bioinformatics | phage | public health
Dissertation