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Bioinformatics, ISSN 1367-4803, 11/2019, Volume 35, Issue 21, pp. 4519 - 4521
Abstract Summary Functional annotations and their hierarchical classification are widely used in omics workflows to build novel insight upon existing... 
Applications Notes
Journal Article
Nature, ISSN 0028-0836, 11/2017, Volume 551, Issue 7681, pp. 507 - 511
Current sequencing-based analyses of faecal microbiota quantify microbial taxa and metabolic pathways as fractions of the sample sequence library generated by... 
ENTEROTYPES | CROHNS-DISEASE | MULTIDISCIPLINARY SCIENCES | MARKERS | STOOL CONSISTENCY | DIVERSITY | TRANSIT-TIME | FECAL BACTERIA | Intestines | Genetic aspects | Microbiota (Symbiotic organisms) | Health aspects | Flow cytometry | Enumeration | Microbiology | Digestive system | Abundance | Crohn's disease | Metabolism | Disease control | Microorganisms | Microbiota | Metabolites | Bacteria | Metabolic pathways | Variation
Journal Article
Journal Article
PLoS ONE, ISSN 1932-6203, 11/2012, Volume 7, Issue 11, p. e49138
Crohn's disease (CD) is an inflammatory bowel disease of complex etiology, although dysbiosis of the gut microbiota has been implicated in chronic... 
PROTEIN IDENTIFICATIONS | PROFILES | INFLAMMATORY-BOWEL-DISEASE | TWINS | DATABASE | PORPHYROMONAS-GINGIVALIS | MULTIDISCIPLINARY SCIENCES | ULCERATIVE-COLITIS | RAG LOCUS | DIVERSITY | GUT MICROBIOTA | Metagenomics | Bacteria - metabolism | Ileum - pathology | Intestinal Mucosa - metabolism | Humans | Crohn Disease - metabolism | Gastrointestinal Tract - microbiology | Ileum - metabolism | Male | Proteome | Intestinal Mucosa - microbiology | Twins, Monozygotic | Bacteria - genetics | Gastrointestinal Tract - metabolism | Metabolic Networks and Pathways | Proteomics | Crohn Disease - microbiology | Female | Ileum - microbiology | Metagenome | Cluster Analysis | Intestinal Mucosa - pathology | Proteins | Microbiota (Symbiotic organisms) | Gastrointestinal diseases | Development and progression | Carbohydrate metabolism | Inflammation | Shotguns | Bioengineering | Dysbacteriosis | Inflammatory bowel diseases | Target recognition | Laboratories | Genomes | Biology | Data bases | Microbiota | Alterations | Acquired immune deficiency syndrome--AIDS | Etiology | Intestine | Gastroenterology | Bacteria | Bioindicators | Colon | Signatures | Bioinformatics | Carbohydrates | Internal medicine | Earth science | Metabolism | Ileum | Crohns disease | Medicine | Studies | Inflammatory bowel disease | Crohn's Disease | Acids | Biomarkers | Scientific imaging | Diagnostic systems | Mass spectrometry | Medicin | Clinical Medicine | Medical and Health Sciences | Klinisk medicin | Medicin och hälsovetenskap | Acquired immune deficiency syndrome | AIDS
Journal Article
Nature, ISSN 0028-0836, 04/2016, Volume 532, Issue 7600, pp. 465 - 470
Journal Article
ISME Journal, ISSN 1751-7362, 05/2016, Volume 10, Issue 5, pp. 1025 - 1028
Journal Article
Science, ISSN 0036-8075, 05/2015, Volume 348, Issue 6237, pp. 1262073 - 1262073
Species interaction networks are shaped by abiotic and biotic factors. Here, as part of the Tara Oceans project, we studied the photic zone interactome using... 
BACTERIA | RIBOSOMAL-RNA SEQUENCES | TOP-DOWN | MULTIDISCIPLINARY SCIENCES | SPATIAL COMPONENT | NETWORKS | DIVERSITY | MARINE | PROTISTS | MORPHOLOGY | ECOLOGICAL VARIATION | Plankton | Oceans | Microscopy | Networks | Ocean models | Communities | Viruses | Mathematical models | Physics | Geophysics
Journal Article
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 07/2018, Volume 46, Issue W1, pp. W510 - W513
Abstract iPath3.0 (http://pathways.embl.de) is a web-application for the visualization and analysis of cellular pathways. It is freely available and open to... 
BIOCHEMISTRY & MOLECULAR BIOLOGY | Web Server Issue
Journal Article
Gut, ISSN 0017-5749, 07/2019, Volume 68, Issue 7, pp. 1180 - 1189
ObjectiveHuman gut microbiome studies are mainly bacteria- and archaea-oriented, overlooking the presence of single-cell eukaryotes such as Blastocystis, an... 
Blastocystis | Microbiota | FGFP | BACTERIA | SEQUENCES | RICHNESS | AKKERMANSIA-MUCINIPHILA | COMMON | PARASITE | GASTROENTEROLOGY & HEPATOLOGY | MEMBER | Life Sciences | Symbiosis | Quantitative Methods | Ecosystems | Biochemistry, Molecular Biology | Genomics | Ecology, environment | Molecular Networks | Biodiversity and Ecology | Environmental Sciences | 2312 | 1506 | Gut Microbiota
Journal Article
Journal of the American College of Cardiology, ISSN 0735-1097, 03/2019, Volume 73, Issue 9, pp. 669 - 669
Journal Article