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1. Full Text Examination of Antigen-Induced Endocytic Structure Formation in B Lymphocytes
by Davenport, Thaddeus M and Dickey, Andrea M and Sochacki, Kem A and Taraska, Justin W
Biophysical Journal, ISSN 0006-3495, 02/2017, Volume 112, Issue 3, pp. 394a - 395a
Antigens | B cells
Journal Article
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2. Full Text Structures of HIV-1 Env V1V2 with broadly neutralizing antibodies reveal commonalities that enable vaccine design
by Gorman, Jason and Soto, Cinque and Yang, Max M and Davenport, Thaddeus M and Guttman, Miklos and Bailer, Robert T and Chambers, Michael and Chuang, Gwo-Yu and Dekosky, Brandon J and Doria-Rose, Nicole A and Druz, Aliaksandr and Ernandes, Michael J and Georgiev, Ivelin S and Jarosinski, Marissa C and Joyce, M. Gordon and Lemmin, Thomas M and Leung, Sherman and Louder, Mark K and McDaniel, Jonathan R and Narpala, Sandeep and Pancera, Marie and Stuckey, Jonathan and Wu, Xueling and Yang, Yongping and Zhang, Baoshan and Zhou, Tongqing and Mullikin, James C and Baxa, Ulrich and Georgiou, George and McDermott, Adrian B and Bonsignori, Mattia and Haynes, Barton F and Moore, Penny L and Morris, Lynn and Lee, Kelly K and Shapiro, Lawrence and Mascola, John R and Kwong, Peter D and NISC Comparative Sequencing and NISC Comparative Sequencing Program and Argonne National Lab. (ANL), Argonne, IL (United States). Advanced Photon Source (APS)
Nature Structural and Molecular Biology, ISSN 1545-9993, 01/2016, Volume 23, Issue 1, pp. 81 - 90
Broadly neutralizing antibodies (bNAbs) against HIV-1 Env V1V2 arise in multiple donors. However, atomic-level interactions had previously been determined only... 
SITE | REPERTOIRE | POTENT NEUTRALIZATION | RECOGNITION | HIV-1-NEUTRALIZING ANTIBODIES | CRYSTAL-STRUCTURE | BIOCHEMISTRY & MOLECULAR BIOLOGY | ENVELOPE PROTEIN | IMMUNOGEN DESIGN | MATURATION | CELL BIOLOGY | TRIMER | BIOPHYSICS | Cell Line | env Gene Products, Human Immunodeficiency Virus - immunology | Humans | AIDS Vaccines - immunology | Models, Molecular | Crystallography, X-Ray | HIV Antibodies - chemistry | Antibodies, Neutralizing - immunology | HIV-1 - immunology | HIV Antibodies - immunology | HIV-1 - chemistry | Antibodies, Neutralizing - chemistry | Protein Binding | Protein Conformation | env Gene Products, Human Immunodeficiency Virus - chemistry | Prevention | Development and progression | Care and treatment | Research | HIV infection | Immunoglobulins | Immunology | Vaccines | Human immunodeficiency virus--HIV
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3. Full Text Somatic Hypermutation-Induced Changes in the Structure and Dynamics of HIV-1 Broadly Neutralizing Antibodies
by Davenport, Thaddeus M and Gorman, Jason and Joyce, M. Gordon and Zhou, Tongqing and Soto, Cinque and Guttman, Miklos and Moquin, Stephanie and Yang, Yongping and Zhang, Baoshan and Doria-Rose, Nicole A and Hu, Shiu-Lok and Mascola, John R and Kwong, Peter D and Lee, Kelly K and Argonne National Lab. (ANL), Argonne, IL (United States). Advanced Photon Source (APS)
Structure, ISSN 0969-2126, 08/2016, Volume 24, Issue 8, pp. 1346 - 1357
Antibody somatic hypermutation (SHM) and affinity maturation enhance antigen recognition by modifying antibody paratope structure to improve its... 
PROTEIN DYNAMICS | DESIGN | EVOLUTION | BIOPHYSICS | RECOGNITION | AFFINITY MATURATION | BIOCHEMISTRY & MOLECULAR BIOLOGY | FRAMEWORK | BINDING-SITE | DIVERSITY | FAMILY | CELL BIOLOGY | Viral antibodies | Antibodies | HIV (Viruses) | Mass spectrometry | Antigenic determinants | Crystals | Structure
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4. Full Text Probing the Impact of Local Structural Dynamics of Conformational Epitopes on Antibody Recognition
by Liang, Yu and Guttman, Miklos and Davenport, Thaddeus M and Hu, Shiu-Lok and Lee, Kelly K
Biochemistry, ISSN 0006-2960, 04/2016, Volume 55, Issue 15, pp. 2197 - 2213
Antibody–antigen interactions are governed by recognition of specific residues and structural complementarity between the antigen epitope and antibody... 
HIV-1 GP120 | NEUTRALIZING ANTIBODIES | HEMAGGLUTININ-STEM | CD4 BINDING-SITE | CRYSTAL-STRUCTURE | BIOCHEMISTRY & MOLECULAR BIOLOGY | GP120 ENVELOPE GLYCOPROTEIN | X-RAY | SURFACE GLYCOPROTEIN | HUMAN-IMMUNODEFICIENCY-VIRUS | HUMAN MONOCLONAL-ANTIBODIES | HIV Antibodies - metabolism | Amino Acid Sequence | Epitopes - metabolism | Humans | Models, Molecular | Crystallography, X-Ray | HIV Antibodies - chemistry | Antigen-Antibody Reactions | HIV Envelope Protein gp120 - immunology | HIV-1 - immunology | Antigen-Antibody Complex - chemistry | CD4 Antigens - chemistry | HEK293 Cells | Protein Binding | Protein Conformation | Epitopes - chemistry | Molecular Docking Simulation | HIV Envelope Protein gp120 - chemistry | Binding Sites, Antibody | CD4 Antigens - metabolism | Glycoproteins | Biochemistry | Chemical properties | Research | Antigenic determinants
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5. Full Text Isolate-Specific Differences in the Conformational Dynamics and Antigenicity of HIV-1 gp120
by Thaddeus M. Davenport and Miklos Guttman and Wenjin Guo and Brad Cleveland and Maria Kahn and Shiu-Lok Hu and Kelly K. Lee
Journal of Virology, ISSN 0022-538X, 10/2013, Volume 87, Issue 19, pp. 10855 - 10873
Article Usage Stats Services JVI Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley... 
X-RAY SOLUTION | HTLV-III | BIOLOGICAL MACROMOLECULES | VIROLOGY | SMALL-ANGLE SCATTERING | N-LINKED GLYCAN | ENVELOPE GLYCOPROTEIN | INNER DOMAIN | HYDROGEN/DEUTERIUM EXCHANGE | HUMAN-IMMUNODEFICIENCY-VIRUS | HUMAN MONOCLONAL-ANTIBODIES | Antibodies, Neutralizing | Surface Plasmon Resonance | Antigens, Viral - metabolism | Humans | Scattering, Small Angle | Glycosylation | HIV Envelope Protein gp120 - metabolism | Epitopes - immunology | HIV Envelope Protein gp120 - immunology | Antigens, Viral - immunology | Deuterium Exchange Measurement | HIV Antibodies - immunology | Drug Design | AIDS Vaccines | Protein Conformation | Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization | HIV Envelope Protein gp120 - chemistry | CD4 Antigens - metabolism | Structure and Assembly
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6. Full Text Binding Interactions between Soluble HIV Envelope Glycoproteins and Quaternary-Structure-Specific Monoclonal Antibodies PG9 and PG16
by Thaddeus M. Davenport and Della Friend and Katharine Ellingson and Hengyu Xu and Zachary Caldwell and George Sellhorn and Zane Kraft and Roland K. Strong and Leonidas Stamatatos
Journal of Virology, ISSN 0022-538X, 07/2011, Volume 85, Issue 14, pp. 7095 - 7107
Article Usage Stats Services JVI Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley... 
IMMUNIZATION | IMMUNOGENICITY | VIROLOGY | PARTIAL DELETION | VACCINE | IMMUNODEFICIENCY-VIRUS TYPE-1 | GP140 | BROAD | GP120 | ISOLATE | ELICITS NEUTRALIZING ANTIBODIES | Surface Plasmon Resonance | Cell Line | env Gene Products, Human Immunodeficiency Virus - immunology | Base Sequence | Humans | Protein Structure, Quaternary | Solubility | Protein Binding | env Gene Products, Human Immunodeficiency Virus - metabolism | Antibodies, Monoclonal - metabolism | DNA Primers | env Gene Products, Human Immunodeficiency Virus - chemistry | Vaccines and Antiviral Agents
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7. Full Text Somatic Hypermutation-Induced Changes in the Structure and Dynamics of HIV-1 Broadly Neutralizing Antibodies
by Davenport, Thaddeus M and Gorman, Jason and Joyce, M. Gordon and Zhou, Tongqing and Soto, Cinque and Guttman, Miklos and Moquin, Stephanie and Yang, Yongping and Zhang, Baoshan and Doria-Rose, Nicole A and Hu, Shiu-Lok and Mascola, John R and Kwong, Peter D and Lee, Kelly K
Structure, ISSN 0969-2126, 08/2016, Volume 24, Issue 8
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8. Full Text Purification of recombinant vaccinia virus-expressed monomeric HIV-1 gp120 to apparent homogeneity
by Guo, Wenjin and Cleveland, Brad and Davenport, Thaddeus M and Lee, Kelly K and Hu, Shiu-Lok
Protein Expression and Purification, ISSN 1046-5928, 07/2013, Volume 90, Issue 1, pp. 34 - 39
Vaccinia virus (VV) has been used to express a variety of heterologous proteins, including HIV envelope (Env) glycoproteins. The Env protein is synthesized as... 
HIV envelope protein | gp120 | Vaccinia virus expression | Surface plasmon resonance | Empigen BB | CELLS | NEUTRALIZING ANTIBODIES | BIOCHEMISTRY & MOLECULAR BIOLOGY | BIOCHEMICAL RESEARCH METHODS | ENVELOPE GLYCOPROTEIN | VACCINATION | CLADE-C | HUMAN-IMMUNODEFICIENCY-VIRUS | GP160 | IMMUNOGENICITY | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | PROTEIN EXPRESSION | INFECTION | HIV Envelope Protein gp120 - genetics | Recombinant Proteins - metabolism | Detergents - chemistry | Vaccinia virus - metabolism | Electrophoresis, Polyacrylamide Gel | Organic Chemicals - chemistry | Recombinant Proteins - genetics | HIV Envelope Protein gp120 - metabolism | Protein Precursors - metabolism | Recombinant Proteins - isolation & purification | HIV Envelope Protein gp120 - isolation & purification | Chromatography, Gel | HIV Envelope Protein gp160 - metabolism | HIV (Viruses) | Vaccinia
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9. Full Text Structural Diversity in Antibody Interactions with HIV-1 Env Immunogens
by Davenport, Thaddeus M
01/2013, ISBN 1321352123
Due to the impressive diversity of human immunodeficiency virus type 1 (HIV-1), control of the HIV-1 pandemic will likely depend on the design of a vaccine... 
Immunology | Biochemistry | Virology
Dissertation
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10. Structural Diversity in Antibody Interactions with HIV-1 Env Immunogens
by Davenport, Thaddeus M
01/2013, ISBN 1321352123, Volume 76, Issue 3
Due to the impressive diversity of human immunodeficiency virus type 1 (HIV-1), control of the HIV-1 pandemic will likely depend on the design of a vaccine... 
Book Chapter
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11. Full Text Allorecognition by murine natural killer cells: lysis of T‐lymphoblasts and rejection of bone‐marrow grafts
by George, Thaddeus and Lawrence Yu, Yik Yeung and Liu, Jingxuan and Davenport, Colleen and Lemieux, Suzanne and Stoneman, Earl and Mathew, Porunelloor A and Kumar, Vinay and Bennett, Michael
Immunological Reviews, ISSN 0105-2896, 02/1997, Volume 155, Issue 1, pp. 29 - 40
Natural killer (NK) cells of inbred mice reject allogeneic bone‐marrow cells, and NK cells of F1 hybrid mice can reject parental bone‐marrow cells (hybrid... 
INBRED MOUSE STRAINS | CLASS-I MHC | HYBRID RESISTANCE | LY-49 MULTIGENE FAMILY | NK CELLS | GENE | IMMUNOLOGY | EXPRESSION | HISTOCOMPATIBILITY ANTIGENS | TRANSGENIC MICE | MOLECULES | Bone Marrow Transplantation - immunology | Animals | Lymphocyte Activation | Isoantigens - immunology | Killer Cells, Natural - immunology | T-Lymphocytes - immunology | Mice | Graft Rejection - immunology | Cytotoxicity, Immunologic - immunology
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12. Facilitation of parental-strain marrow engraftment by T cells of neonatally-tolerant mice
by Davenport, Colleen and George, Thaddeus and Devora, Gene A and Morris, Margaret A and Gordon, Brian E and Kumar, Vinay and Bennett, Michael
Biology of Blood and Marrow Transplantation, ISSN 1083-8791, 12/1997, Volume 3, Issue 6, pp. 294 - 303
T cells present in bone marrow cell (BMC) grafts promote engraftment in histoincompatible hosts, but they or other T cells may also initiate lethal... 
Graft facilitating T cells | Neonatal tolerance | Natural killer cells | Hybrid resistance | Cell Separation | Mice, Inbred C57BL | Thymus Gland - cytology | Immune Tolerance | Radiation Chimera | Mice, SCID | Graft vs Host Disease - immunology | Bone Marrow Transplantation - immunology | H-2 Antigens - immunology | Animals | Flow Cytometry | Bone Marrow Cells - immunology | Killer Cells, Natural - immunology | Mice, Inbred CBA | T-Lymphocytes - immunology | Thymus Gland - immunology | H-2 Antigens - analysis | Mice | Mice, Inbred BALB C | Graft Rejection - immunology
Journal Article
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13. Full Text Private and Official Correspondence of Gen. Benjamin F. Butler, During the Period of the Civil War, vol. 5
by Butler, Benjamin Franklin and Butler, Sarah Jones Hildreth and Tyler, Julia Gardiner and Grant, Ulysses Simpson and Farragut, David Glasgow and Sherman, William Tecumseh and Lincoln, Abraham and Gay, Sydney Howard and Garrison, William Lloyd and Banks, Nathaniel Prentiss and Hale, Edward Everett and Stanton, Edwin McMasters and Halleck, Henry Wager and Phillips, Wendell and Sumner, Charles and Marston, Gilman and Cameron, Simon and Comstock, Cyrus Ballou and Townsend, Edward Davis and Fay, Richard S., Jr. 1861 and Hildreth, Fisher Ames and Blair, Montgomery and Fox, Gustavus Vasa and Dix, John Adams and Loring, George Bailey and Pierce, Edward Lillie and Chase, Salmon Portland and Gordon, George Henry and Porter, David Dixon and Read, Henry 1862 and Weitzel, Godfrey and Greeley, Horace and Ord, Edward Otho Cresap and Garfield, James Abram and Kautz, August Valentine and Birney, David Bell and Wilson, James Grant and Fessenden, William Pitt and Nicolay, John George and Carter, David K. 1863-1868 and Turner, John Wesley and Parton, James and Barney, Hiram and Gurowski, Adam and Shaffer, John Wilson and Puffer, Alfred F. 1862-1865 and Bullock, Alexander Hamilton and Howard, Oliver Otis and Clarke, John 1863-1865 and Herbert, J. K. 1864 and Kensel, George Amos, ?-1881 and Evans, Estwick and Kinsman, Josiah Burnham and Heaton, David and Rawlins, John Aaron and Risley, Hanson A. 1864 and Jourdan, James and Wright, Erastus 1864 and Upham, Nathaniel Gookin and Terry, Alfred Howe and Martindale, John Henry and Ingalls, Rufus and Webster, W. P. 1864 and Kinsley, Edward Wilkinson 1862-1891 and Greene, William Batchelder and Wilkes, George and Farrington, D. W. C. 1864-1868 and Upshur, John Henry and Hudson, Henry Norman and Way, George B. 1864 and McIntire, John 1864-1872 and Bird, Francis W. 1864 and Claflin, William and Chandler, William Eaton and Dix, Morgan and Bryant, William Cullen and Mulford, John Elmer and Clark, Thomas March and Bellows, Henry Whitney and Conkling, Edgar 1864 and Dunham, E. W. 1864 and Stewart, John Aiken and Warner, Yardley 1864 and White, Frank I and Lawson, Peter 1864 and Findley, William R. 1864 and Pierrepont, Edwards and DeKay, Sidney B. 1864-1865 and Dana, Charles Anderson and Turner, Henry M. 1865 and Taylor, John Lord and Lane, George W. 1866 and Davenport, John I. 1864-1865 and Whitlock, Charles 1865 and Wade, Benjamin Franklin and Draper, Alonzo Granville and Wardwell, Burnham 1865 and Ochiltre, John B. 1861-1865 and Clark, John 1865 and Angell, F. A. 1865 and ...
1917, 748
War
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14. Full Text Yes, Miss Burney
by Betty Rizzo
4/2003, Volume 22, Issue 1, 9
Review Essay | LITERATURE | Eighteenth Century | Burney, Fanny (Mme d'Arblay) | English Literature | Authors | Books | Book reviews
Book Review
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15. Full Text The sexton's monitor, and, Dorchester cemetary memorial
by Davenport, Daniel and First Church (Dorchester, Boston, Mass.)
1826, 45
Dedication to the Rev. Thaddeus Mason Harris (p. iii) signed: Daniel Davenport, Dorchester, January 1, 1826. Davenport was the sexton of the First Church in... 
Medicine | Early Republic | Biography | Epitaphs
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16. Full Text Global variation in anastomosis and end colostomy formation following left‐sided colorectal resection
by Glasbey, James C and Adisa, Adewale O and Costas‐Chavarri, Ainhoa and Qureshi, Ahmad U and Allen‐Ingabire, Jean C and Salem, Hosni Khairy and Kojo, Anyomih Theophilus Teddy and Tabiri, Stephen and Nepogodiev, Dmitri and Lilford, Richard J and Harrison, Ewen M and Pinkney, Thomas D and Smart, Neil and Bhangu, Aneel and Verjee, Azmina and Runigamugabo, Emmy and Glasbey, James and Bhangu, Aneel and Ademuyiwa, Adesoji O and Adisa, Adewale O and Aguilera, Maria Lorena and Altamini, Afnan and Alexander, Philip and Al‐Saqqa, Sara W and Borda‐Luque, Giuliano and Cornick, Jen and Costas‐Chavarri, Ainhoa and Drake, Thomas M and Fergusson, Stuart J and Fitzgerald, J Edward and Glasbey, James and Ingabire, J.C Allen and Ismaïl, Lawani and Jaffry, Zahra and Salem, Hosni Khairy and Khatri, Chetan and Kirby, Andrew and Kojo, Anyomih Theophilus Teddy and Lapitan, Marie Carmela and Lilford, Richard and Mihaljevic, Andre L and Mohan, Midhun and Morton, Dion and Mutabazi, Alphonse Zeta and Nepogodiev, Dmitri and Ntirenganya, Faustin and Ots, Riinu and Pata, Francesco and Pinkney, Thomas and Poškus, Tomas and Qureshi, Ahmad Uzair and Medina, Antonio Ramos‐De and Rayne, Sarah and Recinos, Gustavo and Søreide, Kjetil and Shaw, Catherine A and Shu, Sebastian and Spence, Richard and Smart, Neil and Tabiri, Stephen and Lilford, Richard and Morton, Dion and Harrison, Ewen M and Bhangu, Aneel and Khatri, Chetan and Gobin, Neel and Freitas, Ana Vega and Hall, Nigel and Kim, Sung‐Hee and Negida, Ahmed and Khairy, Hosni and Jaffry, Zahra and Chapman, Stephen J and Arnaud, Alexis P and Tabiri, Stephen and Recinos, Gustavo and Manipal, Cutting Edge and Mohan, Midhun and Amandito, Radhian and Shawki, Marwan and Hanrahan, Michael and Pata, Francesco and Zilinskas, Justas and Roslani, April Camilla and Goh, Cheng Chun and Ademuyiwa, Adesoji O and Irwin, Gareth and Shu, Sebastian and Luque, Laura and Shiwani, Hunain and Altamimi, Afnan and Alsaggaf, Mohammed Ubaid and Fergusson, Stuart J and Spence, Richard and Rayne, Sarah and Jeyakumar, Jenifa and Cengiz, Yucel and Raptis, Dmitri A and Glasbey, James C and Modolo, Maria Marta and ... and Protocol development and project steering and GlobalSurg Collaborative and National leads (GlobalSurg‐2) and National leads (GlobalSurg‐1) and Patient representatives and Writing group and Local collaborators (GlobalSurg‐1) and Statistical analysis and Local collaborators (GlobalSurg‐2) and Data validators (GlobalSurg‐2) and Protocol translators (GlobalSurg‐2)
BJS Open, ISSN 2474-9842, 06/2019, Volume 3, Issue 3, pp. 403 - 414
Background End colostomy rates following colorectal resection vary across institutions in high‐income settings, being influenced by patient, disease, surgeon... 
Surgical outcomes | Medical research | Mortality | Colorectal cancer | Laparoscopy | Patients | Quality of life | Studies | Ethics | Ostomy | Hospitals | Collaboration | Surgeons | Colorectal surgery
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17. Full Text Osteoporosis and hip fractures in the Medicare population, 1992-1996
by Davenport, Marsha G and Adelakun, Akintoye and McCormick, Chris
Health Care Financing Review, ISSN 0195-8631, 1999, Volume 21, Issue 1, pp. 123 - 128
Data from the Medicare Current Beneficiary Survey Cost and Use Files for 1992-1996 were used to describe the osteoporosis and hip fracture burden for the... 
HEALTH POLICY & SERVICES | HEALTH CARE SCIENCES & SERVICES | Ethnic Groups - statistics & numerical data | United States - epidemiology | Health Surveys | Humans | Aged, 80 and over | Female | Male | Aged | Medicare - utilization | Hip Fractures - epidemiology | Health Services Research | Osteoporosis - epidemiology | Hip joint | Aging | Physiological aspects | Osteoporosis | Fractures | Risk factors | Statistical data | Demographics | Medicare | Beneficiaries | Polls & surveys
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18. A history of gastric secretion and digestion
: experimental studies to 1975
by Davenport, Horace W. 1912-2005 (Horace Willard)
1992, ISBN 0195073932, xvii, 414
chemistry | Stomach | Secretion | Gastroenterology | physiology | Gastric | Digestion | Research | History | Gastric Acid
Book
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