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Nature, ISSN 0028-0836, 07/2017, Volume 547, Issue 7662, pp. 217 - 221
Effective anti-tumour immunity in humans has been associated with the presence of T cells directed at cancer neoantigens(1), a class of HLA-bound peptides that... 
IMMUNE-RESPONSES | MULTIDISCIPLINARY SCIENCES | CD4(+) T-CELLS | ANTIGENS | CANCER-IMMUNOTHERAPY | SEQUENCING DATA | EXPRESSION | PEPTIDE | PREDICTION | MOLECULES | EPITOPES | Amino Acid Sequence | Antigens, Neoplasm - genetics | Antibodies, Monoclonal, Humanized - therapeutic use | Neoplasm Recurrence, Local - prevention & control | Antigens, Neoplasm - immunology | Humans | Cancer Vaccines - adverse effects | Programmed Cell Death 1 Receptor - antagonists & inhibitors | Cancer Vaccines - chemistry | Antigens, Neoplasm - chemistry | Machine Learning | CD4-Positive T-Lymphocytes - immunology | Neoplasm Recurrence, Local - immunology | Cancer Vaccines - immunology | Histocompatibility Antigens Class II - immunology | Melanoma - genetics | Melanoma - immunology | Antibodies, Monoclonal, Humanized - pharmacology | Patient Safety | High-Throughput Nucleotide Sequencing | Mutation | CD8-Positive T-Lymphocytes - immunology | Melanoma - therapy | Precision Medicine - methods | Care and treatment | Methods | Melanoma | Cancer | Peptides | PD-1 protein | CD8 antigen | Vaccination | Lymphocytes T | Vaccines | Tissues | Immunity | Thymus | Lymphocytes | Immunotherapy | Antigens | Feasibility studies | T cell receptors | Gene expression | Patients | Immunological tolerance | CD4 antigen | Studies | Immune checkpoint | Immunogenicity | Cell death | Histocompatibility antigen HLA | Tumors | Apoptosis
Journal Article
Journal Article
Leukemia, ISSN 0887-6924, 03/2018, Volume 32, Issue 3, pp. 752 - 764
X-box binding protein 1 (XBP1), CD138 (Syndecan-1) and CS1 (SLAMF7) are highly expressed antigens in cancers including multiple myeloma (MM). Here, we identify... 
PLASMA-CELL DISORDERS | RESPONSES | STIMULATION | DENDRITIC CELLS | ONCOLOGY | COLORECTAL-CANCER | BONE-MARROW | VACCINATION | POTENTIAL THERAPEUTIC APPLICATION | DIFFERENTIATION | INDUCTION | HEMATOLOGY | Humans | HLA-A24 Antigen - genetics | Multiple Myeloma - immunology | X-Box Binding Protein 1 - chemistry | HLA-A24 Antigen - metabolism | Lymphocyte Activation - immunology | Peptides - metabolism | T-Cell Antigen Receptor Specificity - immunology | ADP-ribosyl Cyclase 1 - immunology | Epitopes, T-Lymphocyte - immunology | T-Lymphocytes, Cytotoxic - immunology | Amino Acid Sequence | HLA-A24 Antigen - immunology | X-Box Binding Protein 1 - immunology | Cytokines - metabolism | Peptides - chemistry | Peptides - immunology | Multiple Myeloma - metabolism | Epitopes, T-Lymphocyte - chemistry | ADP-ribosyl Cyclase 1 - chemistry | Phenotype | T-Lymphocytes, Cytotoxic - metabolism | X-Box Binding Protein 1 - metabolism | Biomarkers | Cell Line, Tumor | Protein Binding | ADP-ribosyl Cyclase 1 - metabolism | Immunologic Memory | Epitopes, T-Lymphocyte - metabolism | Multiple Myeloma - genetics | Cytotoxicity, Immunologic | Therapy | Peptides | PD-1 protein | Toxicity | CD8 antigen | Vaccination | Multiple myeloma | Cytotoxicity | Lymphocytes T | CD223 antigen | CD28 antigen | CD40L protein | Anticancer properties | CD69 antigen | Cell activation | Antitumor agents | Interleukin 2 | Lymphocytes | CD38 antigen | Activating transcription factor 1 | Perforin | Antigens | Immunization | Immunological memory | Memory cells | Cytokines | Patients | Immune checkpoint | Immunogenicity | Tumor necrosis factor | γ-Interferon | Degranulation | Histocompatibility antigen HLA | Syndecan | CS1 | XBP1 | CD138 | Multipeptide Vaccine specific to HLA-A24+ Patients | Multiple Myeloma
Journal Article
Nature, ISSN 0028-0836, 01/2019, Volume 565, Issue 7738, pp. 234 - 239
Journal Article
European Journal of Immunology, ISSN 0014-2980, 01/2018, Volume 48, Issue 1, pp. 128 - 150
To investigate the role of TCR‐pMHC interaction in regulating lung CD8 tissue‐resident T cell (TR) differentiation, polyclonal responses were compared against... 
T cells | TCR‐pMHC | TGF‐β, Transcriptome | Lung infection | GSEA | Influenza A | TRM | TCR-pMHC | TGF-β, Transcriptome | TGF-BETA | DENDRITIC CELLS | RM CELLS | ANTIGEN PRESENTATION | IMMUNOLOGY | T cells | SALIVARY-GLANDS | INTESTINAL EPITHELIUM | T-RM | GROWTH-FACTOR-BETA | NONLYMPHOID TISSUE | INFLUENZA-A VIRUS | REPERTOIRE DIVERSITY | TGF-beta, Transcriptome | Influenza A Virus, H1N1 Subtype - immunology | T-Lymphocyte Subsets - immunology | DEAD Box Protein 58 - metabolism | Antigens, CD - biosynthesis | Mice, Inbred C57BL | NLR Proteins - metabolism | Receptors, Antigen, T-Cell, alpha-beta - immunology | Lung - cytology | Receptors, Antigen, T-Cell, alpha-beta - genetics | Cell Differentiation - immunology | Animals | Female | Integrin alpha Chains - biosynthesis | Mice | Epitopes, T-Lymphocyte - immunology | CD8-Positive T-Lymphocytes - immunology | Transforming Growth Factor beta - metabolism | Immunologic Memory - immunology | Lung - immunology | Orthomyxoviridae Infections - immunology | Analysis | Influenza | Bone morphogenetic proteins | Transforming growth factors | Cell differentiation | Cells | Antigenic determinants | Enrichment | CD8 antigen | Effector cells | Lymphocytes T | T-cell receptor | CD103 antigen | Pathways | Lymphocytes | Network analysis | Rodents | Video compression | Signatures | Translocation | Memory cells | Lamina propria | Inflammation | Pattern recognition | Epitopes | Gene expression | MPEG encoders | Signaling | Lungs | Antigen-presenting cells | Exhaustion | Niches | Pore formation | influenza A | transcriptome | TGF-β | lung infection
Journal Article
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 2/2007, Volume 104, Issue 9, pp. 3378 - 3383
During pregnancy the uterine decidua is populated by large numbers of natural killer (NK) cells with a phenotype ${\rm CD}56^{\text{superbright}}{\rm... 
Cytometry | Phenotypes | Cytokines | Stromal cells | Stem cells | Cultured cells | Natural killer cells | Progenitor cells | Blood | Endometrium | Pregnancy | RECRUITMENT | NATURAL-KILLER-CELLS | GROWTH-FACTOR-BETA | INTERLEUKIN-15 | MULTIDISCIPLINARY SCIENCES | pregnancy | TRAFFICKING | C-KIT | RECEPTOR | HUMAN ENDOMETRIUM | EXPRESSION | SUBSET | Biological Sciences
Journal Article
Analytical Chemistry, ISSN 0003-2700, 11/2010, Volume 82, Issue 21, p. 9090
  A nanospray MS... method deployed on a quadrupole linear ion trap hybrid can detect targeted peptides with high dynamic range and high sensitivity from... 
Analytical chemistry | Molecules | Peptides | Ions | Entropy | Chromatography
Journal Article
Science, ISSN 0036-8075, 9/2002, Volume 297, Issue 5588, pp. 1867 - 1870
Journal Article
NATURE PROTOCOLS, ISSN 1754-2189, 08/2019, Volume 14, Issue 8, pp. 2571 - 2594
RNase H-dependent PCR-enabled T-cell receptor sequencing (rhTCRseq) can be used to determine paired alpha/beta T-cell receptor (TCR) clonotypes in single cells... 
IMMUNOGLOBULIN | LINKING | ALPHA | BIOCHEMICAL RESEARCH METHODS | Complementarity | Cloning | Bar codes | Data processing | Workflow | Ribonuclease H | Lymphocytes T | Gene expression | Gene sequencing | T-cell receptor | Amplification | Ribonuclease T | Complementarity-determining region | Complementarity-determining region 3 | Plates
Journal Article
Frontiers in Immunology, ISSN 1664-3224, 2014, Volume 5, p. 418
Vaccine-elicited cytotoxic T lymphocytes (CTL) recognizing conserved fragments of a pathogen's proteome could greatly impact infectious diseases and cancers.... 
TCR | Resident memory T cells | T cell epitopes | Proteomics | CTL | Resident-memory T cells | Vaccines | Mass spectrometry | tcr | Mass Spectrometry
Journal Article