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Bioinformatics, ISSN 1367-4803, 04/2011, Volume 27, Issue 7, pp. 968 - 972
Journal Article
Nature Biotechnology, ISSN 1087-0156, 04/2018, Volume 36, Issue 4, pp. 338 - 345
We report the sequencing and assembly of a reference genome for the human GM12878 Utah/Ceph cell line using the MinION (Oxford Nanopore Technologies) nanopore... 
METHYLATION | VARIANTS | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | DNA | LENGTH | GENES | TIME | GAPS | Methods | Nucleotide sequencing | DNA sequencing | Genomes | Major histocompatibility complex | Porosity | Histocompatibility | Assembly | Gene sequencing
Journal Article
NATURE COMMUNICATIONS, ISSN 2041-1723, 07/2019, Volume 10, Issue 1, pp. 3066 - 12
Metagenomic sequence classification should be fast, accurate and information-rich. Emerging long-read sequencing technologies promise to improve the balance... 
SEQUENCES | GENE | MULTIDISCIPLINARY SCIENCES | PHYLOGENETIC CLASSIFICATION | FAST GENOME | TIME | TOOL | Composition | Databases | Computer simulation | Species classification | Classification | Mapping | Genomes | Gene mapping | Data bases | Genera
Journal Article
Bioinformatics, ISSN 1367-4803, 11/2019, Volume 35, Issue 21, pp. 4394 - 4396
Abstract Summary HLA*LA implements a new graph alignment model for human leukocyte antigen (HLA) type inference, based on the projection of linear alignments... 
Applications Notes
Journal Article
by Beecham, Ashley H and Patsopoulos, Nikolaos A and Xifara, Dionysia K and Davis, Mary F and Kemppinen, Anu and Cotsapas, Chris and Shah, Tejas S and Spencer, Chris and Booth, David and Goris, An and Oturai, Annette and Saarela, Janna and Fontaine, Bertrand and Hemmer, Bernhard and Martin, Claes and Zipp, Frauke and D'Alfonso, Sandra and Martinelli-Boneschi, Filippo and Taylor, Bruce and Harbo, Hanne F and Kockum, Ingrid and Hillert, Jan and Olsson, Tomas and Ban, Maria and Oksenberg, Jorge R and Hintzen, Rogier and Barcellos, Lisa F and Agliardi, Cristina and Alfredsson, Lars and Alizadeh, Mehdi and Anderson, Carl and Andrews, Robert and Søndergaard, Helle Bach and Baker, Amie and Band, Gavin and Baranzini, Sergio E and Barizzone, Nadia and Barrett, Jeffrey and Bellenguez, Céline and Bergamaschi, Laura and Bernardinelli, Luisa and Berthele, Achim and Biberacher, Viola and Binder, Thomas M.C and Blackburn, Hannah and Bomfim, Izaura L and Brambilla, Paola and Broadley, Simon and Brochet, Bruno and Brundin, Lou and Buck, Dorothea and Butzkueven, Helmut and Caillier, Stacy J and Camu, William and Carpentier, Wassila and Cavalla, Paola and Celius, Elisabeth G and Coman, Irène and Comi, Giancarlo and Corrado, Lucia and Cosemans, Leentje and Cournu-Rebeix, Isabelle and Cree, Bruce A.C and Cusi, Daniele and Damotte, Vincent and Defer, Gilles and Delgado, Silvia R and Deloukas, Panos and Di Sapio, Alessia and Dilthey, Alexander T and Donnelly, Peter and Dubois, Bénédicte and Duddy, Martin and Edkins, Sarah and Elovaara, Irina and Esposito, Federica and Evangelou, Nikos and Fiddes, Barnaby and Field, Judith and Franke, Andre and Freeman, Colin and Frohlich, Irene Y and Galimberti, Daniela and Gieger, Christian and Gourraud, Pierre-Antoine and Graetz, Christiane and Graham, Andrew and Grummel, Verena and Guaschino, Clara and Hadjixenofontos, Athena and Hakonarson, Hakon and Halfpenny, Christopher and Hall, Gillian and Hall, Per and Hamsten, Anders and Harley, James and Harrower, Timothy and Hawkins, Clive and Hellenthal, Garrett and Hillier, Charles and ... and Wellcome Trust Case Control Consor and Int IBD Genetics Consortium IIBDGC and International Multiple Sclerosis Genetics Consortium (IMSGC) and Wellcome Trust Case Control Consortium 2 (WTCCC2) and International IBD Genetics Consortium (IIBDGC) and Institutionen för fysik, kemi och biologi and Linköpings universitet and Bioinformatik and Tekniska högskolan
Nature Genetics, ISSN 1061-4036, 2013, Volume 45, Issue 11, pp. 1353 - 1362
Journal Article
Nature Genetics, ISSN 1061-4036, 09/2015, Volume 47, Issue 10, pp. 1107 - 1113
Journal Article
Nature Biotechnology, ISSN 1087-0156, 12/2018, Volume 36, Issue 12, pp. 1174 - 1182
Complex allelic variation hampers the assembly of haplotype-resolved sequences from diploid genomes. We developed trio binning, an approach that simplifies... 
VARIANTS | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | SEQUENCE | TOOL | Haplotypes | Heterozygosis | Genomics | Analysis | Genomes | Genetic aspects | Research | Heterozygosity | Offspring | Cattle | Genetic crosses | Heredity | Variation | Assembly | Gene sequencing
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 07/2018, Volume 46, Issue 13, pp. 6712 - 6725
Abstract Despite the key role of the human ribosome in protein biosynthesis, little is known about the extent of sequence variation in ribosomal DNA (rDNA) or... 
RECOMBINATION | HUMAN GENOME | ACID | RDNA | ALIGNMENT | VARIANTS | DNA | BIOCHEMISTRY & MOLECULAR BIOLOGY | ARCHITECTURE | NUCLEOLAR ORGANIZER REGIONS | INHERITANCE | Genomics
Journal Article
Journal Article
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, ISSN 0027-8424, 08/2019, Volume 116, Issue 34, pp. 16955 - 16960
Journal Article