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1. Full Text Molecular subtypes of diffuse large B cell lymphoma are associated with distinct pathogenic mechanisms and outcomes
by Chapuy, Bjoern and Stewart, Chip and Dunford, Andrew J and Kim, Jaegil and Kamburov, Atanas and Redd, Robert A and Lawrence, Mike S and Roemer, Margaretha G. M and Li, Amy J and Ziepert, Marita and Staiger, Annette M and Wala, Jeremiah A and Ducar, Matthew D and Leshchiner, Ignaty and Rheinbay, Ester and Taylor-Weiner, Amaro and Coughlin, Caroline A and Hess, Julian M and Pedamallu, Chandra S and Livitz, Dimitri and Rosebrock, Daniel and Rosenberg, Mara and Tracy, Adam A and Horn, Heike and Van Hummelen, Paul and Feldman, Andrew L and Link, Brian K and Novak, Anne J and Cerhan, James R and Habermann, Thomas M and Siebert, Reiner and Rosenwald, Andreas and Thorner, Aaron R and Meyerson, Matthew L and Golub, Todd R and Beroukhim, Rameen and Wulf, Gerald G and Ott, German and Rodig, Scott J and Monti, Stefano and Neuberg, Donna S and Loeffler, Markus and Pfreundschuh, Michael and Trümper, Lorenz and Getz, Gad and Shipp, Margaret A
Nature medicine, ISSN 1078-8956, 05/2018, Volume 24, Issue 5, pp. 679 - 690
Biochemistry & Molecular Biology | Life Sciences & Biomedicine | Medicine, Research & Experimental | Science & Technology | Cell Biology | Research & Experimental Medicine | Lymphoma, Large B-Cell, Diffuse - pathology | Genes, Neoplasm | Humans | Mutation Rate | Treatment Outcome | DNA Copy Number Variations - genetics | Gene Rearrangement - genetics | Mutation - genetics | Lymphoma, Large B-Cell, Diffuse - genetics | Genetic Heterogeneity | Oncology, Experimental | Development and progression | Genetic aspects | Non-Hodgkin's lymphomas | B cells | Research | Identification and classification | Health aspects | Cancer | Deactivation | Stability | Transcription | Pathogenesis | Copy number | p53 Protein | Malignancy | Inactivation | Clustering | Lymphoma | Molecular chains | Genomic instability | Alterations | Lymphocytes B | Genetic analysis | New combinations | Adults | Mutation | Signatures | B-cell lymphoma | Index Medicus
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2. Full Text Novel Peptide Inhibitors of Angiotensin-converting Enzyme 2
by Lili Huang and Daniel J. Sexton and Kirsten Skogerson and Mary Devlin and Rodger Smith and Indra Sanyal and Tom Parry and Rachel Kent and Jasmin Enright and Qi-long Wu and Greg Conley and Daniel DeOliveira and Lee Morganelli and Matthew Ducar and Charles R. Wescott and Robert C. Ladner
The Journal of biological chemistry, ISSN 0021-9258, 05/2003, Volume 278, Issue 18, pp. 15532 - 15540
Life Sciences & Biomedicine | Biochemistry & Molecular Biology | Science & Technology | Amino Acid Sequence | Angiotensin-Converting Enzyme 2 | Carboxypeptidases - antagonists & inhibitors | Molecular Sequence Data | Angiotensin-Converting Enzyme Inhibitors - pharmacology | Peptidyl-Dipeptidase A | Peptide Library | Peptides - pharmacology | Index Medicus
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3. Full Text MAP2K1 and MAP3K1 mutations in langerhans cell histiocytosis
by Nelson, David S and van Halteren, Astrid and Quispel, Willemijn T and van den Bos, Cor and Bovée, Judith V. M. G and Patel, Bhumi and Badalian-Very, Gayane and van Hummelen, Paul and Ducar, Matthew and Lin, Ling and MacConaill, Laura E and Egeler, R. Maarten and Rollins, Barrett J
Genes chromosomes & cancer, ISSN 1045-2257, 2015, Volume 54, Issue 6, pp. 361 - 368
Oncology | Genetics & Heredity | Life Sciences & Biomedicine | Science & Technology | MAP Kinase Kinase 1 - genetics | MAP Kinase Kinase Kinase 1 - metabolism | Signal Transduction | Histiocytosis, Langerhans-Cell - genetics | Humans | MAP Kinase Kinase 1 - metabolism | Pyrimidinones - pharmacology | Antineoplastic Agents - pharmacology | MAP Kinase Kinase Kinase 1 - genetics | Mutation | Phosphorylation - drug effects | Pyridones - pharmacology | Index Medicus
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4. Full Text Genomic aberrations in cervical adenocarcinomas in Hong Kong Chinese women
by Chung, Tony K.H and Van Hummelen, Paul and Chan, Paul K.S and Cheung, Tak Hong and Yim, So Fan and Yu, Mei Y and Ducar, Matthew D and Thorner, Aaron R and MacConaill, Laura E and Doran, Graeme and Pedamallu, Chandra Sekhar and Ojesina, Akinyemi I and Wong, Raymond R.Y and Wang, Vivian W and Freeman, Samuel S and Lau, Tat San and Kwong, Joseph and Chan, Loucia K.Y and Fromer, Menachem and May, Taymaa and Worley, Michael J and Esselen, Katharine M and Elias, Kevin M and Lawrence, Michael and Getz, Gad and Smith, David I and Crum, Christopher P and Meyerson, Matthew and Berkowitz, Ross S and Wong, Yick Fu
International journal of cancer, ISSN 0020-7136, 08/2015, Volume 137, Issue 4, pp. 776 - 783
cervical adenocarcinoma | genomic alternations | HPV | Life Sciences & Biomedicine | Oncology | Science & Technology | Adenocarcinoma - pathology | Hong Kong | Humans | Middle Aged | Uterine Cervical Neoplasms - pathology | Uterine Cervical Neoplasms - genetics | Adenocarcinoma - virology | Papillomaviridae - genetics | Exome | Papillomaviridae - pathogenicity | Uterine Cervical Neoplasms - virology | Adult | Female | Adenocarcinoma - genetics | Aged | High-Throughput Nucleotide Sequencing | Mutation | Neoplasm Staging | Squamous cell carcinoma | Analysis | Genomics | Genetic aspects | Tumor proteins | Papillomavirus infections | Cancer | Human papillomavirus | Cervical cancer | Tumors | Index Medicus
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5. Full Text An efficiently implementable maximum likelihood decoding algorithm for tailbiting codes
by Ortín, Jorge and Ortín, Jorge and Dúcar, Paloma García and Dúcar, Paloma García and Gutiérrez, Fernando and Gutiérrez, Fernando and Valdovinos, Antonio and Valdovinos, Antonio
Annales des télécommunications, ISSN 0003-4347, 10/2014, Volume 69, Issue 9, pp. 529 - 537
Tailbiting codes | A algorithm | Engineering | Information and Communication, Circuits | Viterbi algorithm | Signal, Image and Speech Processing | Communications Engineering, Networks | Information Systems and Communication Service | R & D/Technology Policy | Computer Communication Networks | Channel coding | Maximum likelihood decoding | Technology | Telecommunications | Science & Technology | Signal and communications theory | Applied sciences | Information, signal and communications theory | Coding, codes | Telecommunications and information theory | Exact sciences and technology | Error-correcting codes | Algorithms
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6. Full Text Clinical identification of oncogenic drivers and copy-number alterations in pituitary tumors
by Bi, Wenya Linda and Greenwald, Noah F and Ramkissoon, Shakti H and Abedalthagafi, Malak and Coy, Shannon M and Ligon, Keith L and Mei, Yu and MacConaill, Laura and Ducar, Matt and Min, Le and Santagata, Sandro and Kaiser, Ursula B and Beroukhim, Rameen and Laws, Edward R and Dunn, Ian F
Endocrinology (Philadelphia), ISSN 0013-7227, 07/2017, Volume 158, Issue 7, pp. 2284 - 2291
Life Sciences & Biomedicine | Endocrinology & Metabolism | Science & Technology | Craniopharyngioma - pathology | Adenoma - genetics | Pituitary Neoplasms - genetics | Humans | Carcinogenesis - genetics | Gene Expression Regulation, Neoplastic | Transcriptome | Male | Pituitary Neoplasms - pathology | Gene Dosage | Oncogenes - physiology | DNA Copy Number Variations | GTP-Binding Protein alpha Subunits, Gs - genetics | Craniopharyngioma - genetics | Wnt Signaling Pathway - genetics | Adenoma - pathology | Chromogranins - genetics | Female | High-Throughput Nucleotide Sequencing | Retrospective Studies | Mutation | Multiplexing | Medical research | Brain | Alterations | Brain tumors | Pituitary | Classification | Feasibility studies | Clinical trials | Growth hormone | Tumors | Index Medicus | Abridged Index Medicus
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7. Full Text Landscape of genomic alterations in pituitary adenomas
by Bi, Wenya Linda and Horowitz, Peleg and Greenwald, Noah F and Abedalthagafi, Malak and Agarwalla, Pankaj K and Gibson, Wiliam J and Mei, Yu and Schumacher, Steven E and Ben-David, Uri and Chevalier, Aaron and Carter, Scott and Tiao, Grace and Brastianos, Priscilla K and Ligon, Azra H and Ducar, Matthew and MacConaill, Laura and Laws, Edward R and Santagata, Sandro and Beroukhim, Rameen and Dunn, Ian F
Clinical cancer research, ISSN 1078-0432, 04/2017, Volume 23, Issue 7, pp. 1841 - 1851
Life Sciences & Biomedicine | Oncology | Science & Technology | Pituitary Neoplasms - genetics | Chromosomes, Human - genetics | Humans | Middle Aged | Brain Neoplasms - pathology | Brain Neoplasms - genetics | INDEL Mutation - genetics | Male | Pituitary Neoplasms - pathology | DNA Copy Number Variations - genetics | Whole Exome Sequencing | Aged, 80 and over | Adult | Female | Aged | Mutation | Genome, Human | Gene Expression Regulation, Neoplastic - genetics | Brain | Transcription | Copy number | Brain tumors | Genomes | Histology | Gene expression | Gene sequencing | Alterations | Experimental design | Pituitary | Chromosomes | Deoxyribonucleic acid--DNA | Tumors | DNA sequencing | Cancer | Index Medicus
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8. Full Text Unique, dual-indexed sequencing adapters with UMIs effectively eliminate index cross-talk and significantly improve sensitivity of massively parallel sequencing
by MacConaill, Laura E and Burns, Robert T and Nag, Anwesha and Coleman, Haley A and Slevin, Michael K and Giorda, Kristina and Light, Madelyn and Lai, Kevin and Jarosz, Mirna and McNeill, Matthew S and Ducar, Matthew D and Meyerson, Matthew and Thorner, Aaron R
BMC genomics, ISSN 1471-2164, 01/2018, Volume 19, Issue 1, pp. 30 - 30
Molecular barcode | Multiplexing | UMI | Massively parallel sequencing | Barcode cross-talk | Adapter | Index | Illumina | Next generation sequencing | Research | Nucleotide sequencing | Methods | Genetic screening | DNA sequencing | Multiprocessing | Usage | Analysis | Index Medicus
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9. Full Text Targetable genetic features of primary testicular and primary central nervous system lymphomas
by Chapuy, Bjoern and Roemer, Margaretha G. M and Stewart, Chip and Tan, Yuxiang and Abo, Ryan P and Zhang, Liye and Dunford, Anew J and Meredith, David M and Thorner, Aaron R and Jordanova, Ekaterina S and Liu, Gang and Feuerhake, Frieich and Ducar, Matthew D and Illerhaus, Gerald and Gusenleitner, Daniel and Linden, Erica A and Sun, Heather H and Homer, Heather and Aono, Miyuki and Pinkus, Geraldine S and Ligon, Azra H and Ligon, Keith L and Ferry, Judith A and Freeman, Gordon J and van Hummelen, Paul and Golub, Todd R and Getz, Gad and Rodig, Scott J and de Jong, Daphne and Monti, Stefano and Shipp, Margaret A
Blood, ISSN 0006-4971, 2016, Volume 127, Issue 7, pp. 869 - 881
Life Sciences & Biomedicine | Hematology | Science & Technology | Central Nervous System Neoplasms - metabolism | Translocation, Genetic | Testicular Neoplasms - genetics | Mediastinal Neoplasms - genetics | Lymphoma, Large B-Cell, Diffuse - pathology | Central Nervous System Neoplasms - genetics | Humans | Testicular Neoplasms - metabolism | Male | Genetic Loci | Lymphoma, Large B-Cell, Diffuse - metabolism | Neoplasm Proteins - metabolism | Testicular Neoplasms - pathology | Central Nervous System Neoplasms - pathology | Mediastinal Neoplasms - pathology | Female | Mediastinal Neoplasms - metabolism | Neoplasm Proteins - genetics | Lymphoma, Large B-Cell, Diffuse - genetics | Index Medicus | Abridged Index Medicus | Lymphoid Neoplasia
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10. Full Text Author Correction: Molecular subtypes of diffuse large B cell lymphoma are associated with distinct pathogenic mechanisms and outcomes
by Chapuy, Bjoern and Stewart, Chip and Dunford, Andrew J and Kim, Jaegil and Kamburov, Atanas and Redd, Robert A and Lawrence, Mike S and Roemer, Margaretha G. M and Li, Amy J and Ziepert, Marita and Staiger, Annette M and Wala, Jeremiah A and Ducar, Matthew D and Leshchiner, Ignaty and Rheinbay, Ester and Taylor-Weiner, Amaro and Coughlin, Caroline A and Hess, Julian M and Pedamallu, Chandra S and Livitz, Dimitri and Rosebrock, Daniel and Rosenberg, Mara and Tracy, Adam A and Horn, Heike and van Hummelen, Paul and Feldman, Andrew L and Link, Brian K and Novak, Anne J and Cerhan, James R and Habermann, Thomas M and Siebert, Reiner and Rosenwald, Andreas and Thorner, Aaron R and Meyerson, Matthew L and Golub, Todd R and Beroukhim, Rameen and Wulf, Gerald G and Ott, German and Rodig, Scott J and Monti, Stefano and Neuberg, Donna S and Loeffler, Markus and Pfreundschuh, Michael and Trümper, Lorenz and Getz, Gad and Shipp, Margaret A
Nature medicine, ISSN 1078-8956, 06/2018, Volume 24, Issue 8, pp. 1 - 2
Lymphocytes B | Lymphoma | B-cell lymphoma
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11. Full Text Publisher Correction: Molecular subtypes of diffuse large B cell lymphoma are associated with distinct pathogenic mechanisms and outcomes
by Chapuy, Bjoern and Stewart, Chip and Dunford, Andrew J and Kim, Jaegil and Kamburov, Atanas and Redd, Robert A and Lawrence, Mike S and Roemer, Margaretha G. M and Li, Amy J and Ziepert, Marita and Staiger, Annette M and Wala, Jeremiah A and Ducar, Matthew D and Leshchiner, Ignaty and Rheinbay, Ester and Taylor-Weiner, Amaro and Coughlin, Caroline A and Hess, Julian M and Pedamallu, Chandra S and Livitz, Dimitri and Rosebrock, Daniel and Rosenberg, Mara and Tracy, Adam A and Horn, Heike and van Hummelen, Paul and Feldman, Andrew L and Link, Brian K and Novak, Anne J and Cerhan, James R and Habermann, Thomas M and Siebert, Reiner and Rosenwald, Andreas and Thorner, Aaron R and Meyerson, Matthew L and Golub, Todd R and Beroukhim, Rameen and Wulf, Gerald G and Ott, German and Rodig, Scott J and Monti, Stefano and Neuberg, Donna S and Loeffler, Markus and Pfreundschuh, Michael and Trümper, Lorenz and Getz, Gad and Shipp, Margaret A
Nature medicine, ISSN 1078-8956, 06/2018, Volume 24, Issue 8, pp. 1 - 1292
Labels | Nucleotide sequence | Lymphocytes B | Lymphoma | B-cell lymphoma
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