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by Leung, Wilson and Shaffer, Christopher D and Reed, Laura K and Smith, Sheryl T and Barshop, William and Dirkes, William and Dothager, Matthew and Lee, Paul and Wong, Jeannette and Xiong, David and Yuan, Han and Bedard, James E.J and Machone, Joshua F and Patterson, Seantay D and Price, Amber L and Turner, Bryce A and Robic, Srebrenka and Luippold, Erin K and McCartha, Shannon R and Walji, Tezin A and Walker, Chelsea A and Saville, Kenneth and Abrams, Marita K and Armstrong, Andrew R and Armstrong, William and Bailey, Robert J and Barberi, Chelsea R and Beck, Lauren R and Blaker, Amanda L and Blunden, Christopher E and Brand, Jordan P and Brock, Ethan J and Brooks, Dana W and Brown, Marie and Butzler, Sarah C and Clark, Eric M and Clark, Nicole B and Collins, Ashley A and Cotteleer, Rebecca J and Cullimore, Peterson R and Dawson, Seth G and Docking, Carter T and Dorsett, Sasha L and Dougherty, Grace A and Downey, Kaitlyn A and Drake, Andrew P and Earl, Erica K and Floyd, Trevor G and Forsyth, Joshua D and Foust, Jonathan D and Franchi, Spencer L and Geary, James F and Hanson, Cynthia K and Harding, Taylor S and Harris, Cameron B and Heckman, Jonathan M and Holderness, Heather L and Howey, Nicole A and Jacobs, Dontae A and Jewell, Elizabeth S and Kaisler, Maria and Karaska, Elizabeth A and Kehoe, James L and Koaches, Hannah C and Koehler, Jessica and Koenig, Dana and Kujawski, Alexander J and Kus, Jordan E and Lammers, Jennifer A and Leads, Rachel R and Leatherman, Emily C and Lippert, Rachel N and Messenger, Gregory S and Morrow, Adam T and NewcombVictoria, Haley J and Plasman, Plasman and Potocny, Stephanie J and Powers, Michelle K and Reem, Rachel M and Rennhack, Jonathan P and Reynolds, Katherine R and Reynolds, Lyndsey A and Rhee, Dong K and Rivard, Allyson B and Ronk, Adam J and Rooney, Meghan B and Rubin, Lainey S and Salbert, Luke R and Saluja, Rasleen K and Schauder, Taylor and Schneiter, Allison R and Schulz, Robert W and Smith, Karl E and Spencer, Sarah and Swanson, Bryant R and Tache, Melissa A and Tewilliager, Ashley A and Tilot, Amanda K and VanEck, Eve and Villerot, Matthew M and ... and Participating Students Fac Genomic
G3: Genes, Genomes, Genetics, ISSN 2160-1836, 2015, Volume 5, Issue 5, pp. 719 - 740
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Statistics in Medicine, ISSN 0277-6715, 04/2013, Volume 32, Issue 8, pp. 1280 - 1282
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The International Journal of Biostatistics, ISSN 2194-573X, 09/2013, Volume 9, Issue 1, pp. 95 - 108
In many disease settings, it is likely that only a subset of the disease population will exhibit certain genetic or phenotypic differences from the healthy... 
efficiency | microarray | gene expression analysis | test | hypothesis testing | MATHEMATICAL & COMPUTATIONAL BIOLOGY | t-test | CANCER | Gene Expression Profiling - methods | Data Interpretation, Statistical | Models, Genetic | Research Design | Computer Simulation | Humans
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Journal of Magnetic Resonance Imaging, ISSN 1053-1807, 11/2016, Volume 44, Issue 5, pp. 1262 - 1269
Purpose To longitudinally evaluate the cortical thickness and deep gray matter structures volume, measured from T1 three‐dimensional (3D) Gradient... 
diffusion tensor imaging | HIV | cortical thickness | longitudinal follow‐up | HIV‐associated neurocognitive disorders | longitudinal follow-up | HIV-associated neurocognitive disorders | NERVOUS-SYSTEM | ABNORMALITIES | INJURY | CEREBRAL-CORTEX | TENSOR | CORPUS-CALLOSUM | INFECTION | RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING | BRAIN DIFFUSION | AGE | Gray Matter - immunology | Humans | Middle Aged | Male | Treatment Outcome | Viral Load - immunology | Encephalitis, Viral - drug therapy | White Matter - pathology | Diffusion Tensor Imaging - methods | White Matter - immunology | HIV Infections - immunology | HIV Infections - pathology | Organ Size - immunology | Gray Matter - pathology | Adult | Female | HIV Infections - drug therapy | Encephalitis, Viral - pathology | Antiretroviral Therapy, Highly Active - methods | Encephalitis, Viral - immunology | Longitudinal Studies | Highly active antiretroviral therapy | Magnetization | Anisotropy | HIV patients | T cells | HIV (Viruses) | Dementia | Antiretroviral drugs | Human immunodeficiency virus--HIV | Nuclear magnetic resonance--NMR | Therapy | Segmentation | Image processing | Spatial discrimination | Lymphocytes T | Substantia grisea | Lymphocytes | Antiretroviral agents | Dementia disorders | Diffusion | Reconstruction | Permutations | Statistical analysis | Dimensional measurement | Abnormalities | Cortex | Spatial analysis | Substantia alba | Patients | Diffusivity | CD4 antigen | Thickness | Image segmentation | Magnetic resonance imaging | Echo surveys | Resonance | Integrity
Journal Article
Molecular Cell, ISSN 1097-2765, 04/2017, Volume 66, Issue 1, pp. 102 - 116.e7
Bromodomain and extraterminal motif (BET) proteins are pharmacologic targets for the treatment of diverse diseases, yet the roles of individual BET family... 
chromatin architecture | BRD2 | BET proteins | CTCF | transcription | SELECTIVE-INHIBITION | ORGANIZATION | 1ST BROMODOMAIN | BIOCHEMISTRY & MOLECULAR BIOLOGY | FACTOR GATA-1 | ERYTHROID GENE-EXPRESSION | COHESIN | CHROMATIN INTERACTIONS | DOMAINS | BINDING | GENOME | CELL BIOLOGY | Chromatin - metabolism | Embryonic Stem Cells - metabolism | Receptors, Estrogen - metabolism | RNA, Messenger - metabolism | Recombinant Fusion Proteins - metabolism | Transfection | Membrane Transport Proteins - genetics | Membrane Transport Proteins - metabolism | Transcription, Genetic | Nuclear Proteins - genetics | Binding Sites | Repressor Proteins - metabolism | Cell Line | Receptors, Estrogen - genetics | Chromosomal Proteins, Non-Histone - metabolism | RNA, Messenger - genetics | Chromatin Assembly and Disassembly | Repressor Proteins - genetics | In Situ Hybridization, Fluorescence | Nuclear Proteins - metabolism | Single Molecule Imaging - methods | Transcription Factors - genetics | GATA1 Transcription Factor - metabolism | Chromosomal Proteins, Non-Histone - genetics | Transcription Factors - metabolism | Animals | Enhancer Elements, Genetic | CCCTC-Binding Factor | CRISPR-Cas Systems | GATA1 Transcription Factor - genetics | Protein Binding | Recombinant Fusion Proteins - genetics | Gene Editing - methods | Mice | Chromatin - genetics | Proteins | Medical colleges | RNA | Genes | Genomics | Fluorescence | Genetic aspects | Genetic transcription | Protein binding | Anopheles | Chromatin | Genomes
Journal Article
by Shaffer, Christopher D and Alvarez, Consuelo J and Bednarski, April E and Dunbar, David and Goodman, Anya L and Reinke, Catherine and Rosenwald, Anne G and Wolyniak, Michael J and Bailey, Cheryl and Barnard, Daron and Bazinet, Christopher and Beach, Dale L and Bedard, James E. J and Bhalla, Satish and Braverman, John and Burg, Martin and Chandrasekaran, Vidya and Chung, Hui-Min and Clase, Kari and DeJong, Randall J and DiAngelo, Justin R and Du, Chunguang and Eckdahl, Todd T and Eisler, Heather and Emerson, Julia A and Frary, Amy and Frohlich, Donald and Gosser, Yuying and Govind, Shubha and Haberman, Adam and Hark, Amy T and Hauser, Charles and Hoogewerf, Arlene and Hoopes, Laura L. M and Howell, Carina E and Johnson, Diana and Jones, Christopher J and Kadlec, Lisa and Kaehler, Marian and Catherine Silver Key, S and Kleinschmit, Adam and Kokan, Nighat P and Kopp, Olga and Kuleck, Gary and Leatherman, Judith and Lopilato, Jane and MacKinnon, Christy and Martinez-Cruzado, Juan Carlos and McNeil, Gerard and Mel, Stephanie and Mistry, Hemlata and Nagengast, Alexis and Overvoorde, Paul and Paetkau, Don W and Parrish, Susan and Peterson, Celeste N and Preuss, Mary and Reed, Laura K and Revie, Dennis and Robic, Srebrenka and Roecklein-Canfield, Jennifer and Rubin, Michael R and Saville, Kenneth and Schroeder, Stephanie and Sharif, Karim and Shaw, Mary and Skuse, Gary and Smith, Christopher D and Smith, Mary A and Smith, Sheryl T and Spana, Eric and Spratt, Mary and Sreenivasan, Aparna and Stamm, Joyce and Szauter, Paul and Thompson, Jeffrey S and Wawersik, Matthew and Youngblom, James and Zhou, Leming and Mardis, Elaine R and Buhler, Jeremy and Leung, Wilson and Lopatto, David and Elgin, Sarah C. R
CBE Life Sciences Education, ISSN 1931-7913, 03/2014, Volume 13, Issue 1, pp. 111 - 130
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Statistical Methods in Medical Research, ISSN 0962-2802, 10/2018, Volume 27, Issue 10, pp. 2933 - 2945
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by Leung, Wilson and Shaffer, Christopher D and Reed, Laura K and Smith, Sheryl T and Barshop, William and Dirkes, William and Dothager, Matthew and Lee, Paul and Wong, Jeannette and Xiong, David and Yuan, Han and Bedard, James E. J and Machone, Joshua F and Patterson, Seantay D and Price, Amber L and Turner, Bryce A and Robic, Srebrenka and Luippold, Erin K and McCartha, Shannon R and Walji, Tezin A and Walker, Chelsea A and Saville, Kenneth and Abrams, Marita K and Armstrong, Andrew R and Armstrong, William and Bailey, Robert J and Barberi, Chelsea R and Beck, Lauren R and Blaker, Amanda L and Blunden, Christopher E and Brand, Jordan P and Brock, Ethan J and Brooks, Dana W and Brown, Marie and Butzler, Sarah C and Clark, Eric M and Clark, Nicole B and Collins, Ashley A and Cotteleer, Rebecca J and Cullimore, Peterson R and Dawson, Seth G and Docking, Carter T and Dorsett, Sasha L and Dougherty, Grace A and Downey, Kaitlyn A and Drake, Andrew P and Earl, Erica K and Floyd, Trevor G and Forsyth, Joshua D and Foust, Jonathan D and Franchi, Spencer L and Geary, James F and Hanson, Cynthia K and Harding, Taylor S and Harris, Cameron B and Heckman, Jonathan M and Holderness, Heather L and Howey, Nicole A and Jacobs, Dontae A and Jewell, Elizabeth S and Kaisler, Maria and Karaska, Elizabeth A and Kehoe, James L and Koaches, Hannah C and Koehler, Jessica and Koenig, Dana and Kujawski, Alexander J and Kus, Jordan E and Lammers, Jennifer A and Leads, Rachel R and Leatherman, Emily C and Lippert, Rachel N and Messenger, Gregory S and Morrow, Adam T and Newcomb, Victoria and Plasman, Haley J and Potocny, Stephanie J and Powers, Michelle K and Reem, Rachel M and Rennhack, Jonathan P and Reynolds, Katherine R and Reynolds, Lyndsey A and Rhee, Dong K and Rivard, Allyson B and Ronk, Adam J and Rooney, Meghan B and Rubin, Lainey S and Salbert, Luke R and Saluja, Rasleen K and Schauder, Taylor and Schneiter, Allison R and Schulz, Robert W and Smith, Karl E and Spencer, Sarah and Swanson, Bryant R and Tache, Melissa A and Tewilliager, Ashley A and Tilot, Amanda K and VanEck, Eve and Villerot, Matthew M and ...
G3: Genes|Genomes|Genetics, ISSN 2160-1836, 05/2015, Volume 5, Issue 5, pp. 719 - 740
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