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Cell, ISSN 0092-8674, 2007, Volume 130, Issue 5, pp. 906 - 917
TLR4 and MD-2 form a heterodimer that recognizes LPS (lipopolysaccharide) from Gram-negative bacteria. Eritoran is an analog of LPS that antagonizes its... 
PROTEINS | MOLIMMUNO | BACTERIAL LIPOPOLYSACCHARIDE | MD-2 BINDS | CELL ACTIVATION | BIOCHEMISTRY & MOLECULAR BIOLOGY | TOLL-LIKE RECEPTORS | PROTEIN COMPLEXES | LEUCINE-RICH REPEAT | LIPID IVA | CONFERS LIPOPOLYSACCHARIDE RESPONSIVENESS | TLR4 | MONOMERIC ENDOTOXIN | CELL BIOLOGY | Disaccharides - metabolism | Lymphocyte Antigen 96 - metabolism | Humans | Immunoglobulin Variable Region - chemistry | Lipopolysaccharides - metabolism | Molecular Sequence Data | Crystallography, X-Ray | Hagfishes | Lipopolysaccharides - antagonists & inhibitors | Disaccharides - chemistry | Lymphocyte Antigen 96 - genetics | Disaccharides - pharmacology | Sugar Phosphates - pharmacology | Lymphocyte Antigen 96 - chemistry | Cloning, Molecular | Protein Engineering | Molecular Structure | Toll-Like Receptor 4 - antagonists & inhibitors | Binding Sites | Dimerization | Protein Structure, Tertiary | Amino Acid Sequence | Fish Proteins - chemistry | Sugar Phosphates - chemistry | Models, Molecular | Toll-Like Receptor 4 - genetics | Toll-Like Receptor 4 - chemistry | Recombinant Fusion Proteins - chemistry | Toll-Like Receptor 4 - metabolism | Animals | Sugar Phosphates - metabolism | Hydrophobic and Hydrophilic Interactions | Protein Binding | Protein Conformation | Lipopolysaccharides - chemistry | Mice | Structural Homology, Protein | Mutation | Structure | Crystals | Index Medicus
Journal Article
The Protein Journal, ISSN 1572-3887, 06/2018, Volume 37, Issue 3, p. 223
To access, purchase, authenticate, or subscribe to the full-text of this article, please visit this link: http://dx.doi.org/10.1007/s10930-018-9767-9 Leucine... 
Somatotropin | Crystals | Structure
Journal Article
AIP Conference Proceedings, ISSN 0094-243X, 2012, Volume 1479, Issue 1, pp. 1948 - 1953
The HELFIT program determines the helical parameters - pitch, residues per turn (n), radius, and handedness - and p = rmsd / (N - 1)1/2 estimating helical... 
α-helix | ω-helix | leucine-rich repeat | parahelix | helix | right-handed superhelix | HELFIT | Proteins | Residues | Data banks | Polypeptides | Conferences | Helical | Deviation | Solenoids
Conference Proceeding
AIP Conference Proceedings, ISSN 0094-243X, 2012, Volume 1479, Issue 1, p. 1941
Conference Proceeding
Protein Journal, ISSN 1572-3887, 05/2010, Volume 29, Issue 4, pp. 242 - 249
Journal Article
Proteins: Structure, Function, and Bioinformatics, ISSN 0887-3585, 08/2006, Volume 64, Issue 3, pp. 691 - 699
The 3 10 ‐helix is characterized by having at least two consecutive hydrogen bonds between the main‐chain carbonyl oxygen of residue i and the main‐chain amide... 
helix parameters | helix fitting | parahelix | helix | Helix fitting | Parahelix | Helix parameters
Journal Article
Journal of Proteomics and Bioinformatics, 2014, Volume 7, Issue 6, pp. 139 - 150
Leucine rich repeats (LRR) are present in over 20,000 proteins from viruses to eukaryotes. Most LRR units are 20-30 residues long and can be divided into a... 
Parallel ß-sheet | Solenoid | Oligomerization | BRI1 | LRR | HELFIT | Protein-protein interactions
Journal Article
The Protein Journal, ISSN 1572-3887, 05/2010, Volume 29, Issue 4, p. 242
A modification of the [alpha]-helix, termed the [omega]-helix, has four residues in one turn of a helix. We searched the [omega]-helix in proteins by the... 
Proteins | Medical colleges | Amino acids | Analysis | Geometry | Mathematics | Statistical analysis | Molecular structure
Journal Article
Computational Biology and Chemistry, ISSN 1476-9271, 2008, Volume 32, Issue 4, pp. 307 - 310
The problem of fitting a helix to data arises in analysis of protein structure, in nuclear physics, and in engineering. A continuous helix is described by five... 
Helix fitting | Total least squares | Helix parameters | HELFIT | COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS | total least squares | BIOLOGY | ALGORITHMS | PROTEINS | AXIS | Least-Squares Analysis | Computational Biology - methods | Software | Algorithms | Proteins - chemistry | Protein Structure, Secondary | Index Medicus
Journal Article
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, ISSN 0887-3585, 08/2006, Volume 64, Issue 3, pp. 691 - 699
Journal Article
AIP Conference Proceedings, ISSN 0094-243X, 2012, Volume 1479, Issue 1, pp. 1942 - 1947
A continuous helix is described by five parameters: helix axis (with three components), helix radius, and helix pitch. Moreover, number of data points (amino... 
total least squares helix fitting | protein helix | HELFIT | DNA helix | Mean square values | Data points | Conferences | Least squares method | Mathematical analysis | Amino acids | Helical | Regularity
Conference Proceeding
Current Topics in Peptide and Protein Research, ISSN 0972-4524, 2011, Volume 12, pp. 17 - 28
Journal Article
生物物理, ISSN 0582-4052, 08/2010, Volume 50
Journal Article
PROTEIN JOURNAL, ISSN 1572-3887, 05/2010, Volume 29, Issue 4, pp. 242 - 249
Journal Article
Seibutsu Butsuri, ISSN 0582-4052, 2010, Volume 50, Issue supplement2, p. S83
Journal Article
Proteins: Structure, Function & Bioinformatics, ISSN 0887-3585, 01/2006, Volume 64, Issue 3, pp. 691 - 699
The 3 sub(10)-helix is characterized by having at least two consecutive hydrogen bonds between the main-chain carbonyl oxygen of residue i and the main-chain... 
Journal Article
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