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Biophysical Journal, ISSN 0006-3495, 02/2017, Volume 112, Issue 3, pp. 469a - 470a
Journal Article
Journal Article
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 12/2016, Volume 113, Issue 50, pp. E8051 - E8058
Protein–protein interactions play a central role in cellular function. Improving the understanding of complex formation has many practical applications,... 
Druggable surface | Direct coupling analysis | Drug design | Protein-protein interface | Hot spots | drug design | MULTIDISCIPLINARY SCIENCES | DRUG DISCOVERY | DIMERIZATION | protein-protein interface | INHIBITION | CONSERVATION | hot spots | CDK1 | HOT-SPOTS | direct coupling analysis | HIV-1 PROTEASE | BINDING-SITES | WEB SERVER | druggable surface | COMPUTATIONAL PREDICTION | Histone Deacetylase 1 - chemistry | Molecular Probes | HIV Protease - drug effects | Humans | Proto-Oncogene Proteins c-mdm2 - chemistry | CDC2-CDC28 Kinases - antagonists & inhibitors | Repressor Proteins - antagonists & inhibitors | HIV Protease Inhibitors - pharmacology | Proto-Oncogene Proteins c-mdm2 - drug effects | CDC2 Protein Kinase - drug effects | Drug Design | Histone Deacetylase 1 - drug effects | CDC2 Protein Kinase - chemistry | Histone Deacetylase 1 - antagonists & inhibitors | Binding Sites | Proto-Oncogene Proteins c-mdm2 - antagonists & inhibitors | Molecular Docking Simulation - methods | Repressor Proteins - chemistry | Protein Interaction Domains and Motifs - drug effects | CDC2 Protein Kinase - antagonists & inhibitors | HIV-1 - drug effects | CDC2-CDC28 Kinases - chemistry | CDC2-CDC28 Kinases - drug effects | Histone Deacetylases - chemistry | HIV Protease Inhibitors - chemistry | Tumor Necrosis Factor-alpha - chemistry | Tumor Necrosis Factor-alpha - drug effects | HIV-1 - enzymology | Histone Deacetylases - drug effects | Repressor Proteins - drug effects | HIV Protease - chemistry | Protein Multimerization - drug effects | Tumor Necrosis Factor-alpha - antagonists & inhibitors | Evolution, Molecular | Observations | Protein-protein interactions | Biological Sciences | PNAS Plus | protein−protein interface
Journal Article
Current Opinion in Structural Biology, ISSN 0959-440X, 06/2019, Volume 56, pp. 179 - 186
Evolution imposes constraints at the interface of interacting biomolecules in order to preserve function or maintain fitness. This pressure may have a direct... 
GENOMICS | RESIDUE COEVOLUTION | INFORMATION | BIOCHEMISTRY & MOLECULAR BIOLOGY | SEQUENCE | CONTACT PREDICTIONS | TARGETS | STRUCTURE-BASED MODELS | DIRECT-COUPLING ANALYSIS | IDENTIFICATION | STRUCTURE PREDICTION | CELL BIOLOGY | Proteins | Analysis | Genomics | Amino acids | Genetic aspects | Nucleic acids | Biomedical engineering
Journal Article
Journal Article
Journal of Chemical Information and Modeling, ISSN 1549-9596, 02/2019, Volume 59, Issue 2, pp. 625 - 629
Journal Article
Nature Communications, ISSN 2041-1723, 12/2018, Volume 9, Issue 1, pp. 2511 - 10
RNA-protein interactions permeate biology. Transcription, translation, and splicing all hinge on the recognition of structured RNA elements by RNA-binding... 
BINDING-SPECIFICITY | COMPLEX | BOVINE IMMUNODEFICIENCY VIRUS | TAT | MULTIDISCIPLINARY SCIENCES | IN-VITRO SELECTION | GENOME-WIDE | SECONDARY STRUCTURE | ANTITERMINATION | DIRECT-COUPLING ANALYSIS | STRUCTURE PREDICTION | Gene Products, tat - genetics | RNA-Binding Proteins - genetics | Humans | Immunodeficiency Virus, Bovine - chemistry | RNA - genetics | Gene Products, tat - metabolism | Cloning, Molecular | Escherichia coli - metabolism | Nucleic Acid Conformation | Binding Sites | RNA - metabolism | Recombinant Proteins - metabolism | Amino Acid Sequence | Gene Expression | Genetic Vectors - chemistry | Protein Structure, Secondary | RNA-Binding Proteins - chemistry | Viral Regulatory and Accessory Proteins - genetics | Genetic Vectors - metabolism | Models, Molecular | Recombinant Proteins - chemistry | Gene Products, tat - chemistry | Recombinant Proteins - genetics | RNA - chemistry | RNA Nucleotidyltransferases - chemistry | RNA Nucleotidyltransferases - metabolism | Bacteriophage lambda - chemistry | Viral Regulatory and Accessory Proteins - metabolism | Sequence Analysis, RNA | Escherichia coli - genetics | RNA Nucleotidyltransferases - genetics | Protein Binding | High-Throughput Nucleotide Sequencing | RNA-Binding Proteins - metabolism | Viral Regulatory and Accessory Proteins - chemistry | Binding | Landscape | Transcription | Splicing | Phages | Feature recognition | Ribonucleic acid--RNA | Gene sequencing | Proteins | RNA-binding protein | Next-generation sequencing | Protein interaction | RNA phages
Journal Article
Biophysical Journal, ISSN 0006-3495, 02/2018, Volume 114, Issue 3, pp. 389a - 389a
Journal Article
Biophysical Journal, ISSN 0006-3495, 02/2018, Volume 114, Issue 3, pp. 251a - 252a
Journal Article
Physical Chemistry Chemical Physics, ISSN 1463-9076, 03/2014, Volume 16, Issue 14, pp. 6496 - 6507
Understanding protein folding and function is one of the most important problems in biological research. Energy landscape theory and the folding funnel concept... 
Proteins | Landscapes | Methodology | Mathematical analysis | Mathematical models | Statistical methods | Biological | Folding
Journal Article
Physical Chemistry Chemical Physics, ISSN 1463-9076, 3/2014, Volume 16, Issue 14, pp. 6496 - 657
Journal Article