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Lancet Infectious Diseases, The, ISSN 1473-3099, 2015, Volume 15, Issue 6, pp. 671 - 682
Journal Article
The New England Journal of Medicine, ISSN 0028-4793, 06/2014, Volume 370, Issue 25, pp. 2408 - 2417
Journal Article
Nature Medicine, ISSN 1078-8956, 09/2017, Volume 23, Issue 9, pp. 1080 - 1085
Much attention has been focused on the role of the bacterial microbiome in human health, but the virome is understudied. Although previously investigated in... 
MEDICINE, RESEARCH & EXPERIMENTAL | DIARRHEA | BIOCHEMISTRY & MOLECULAR BIOLOGY | HUMAN PICOBIRNAVIRUSES | FECAL CALPROTECTIN | CHILDREN | CELL BIOLOGY | INFLAMMATION | GENERATION | DIVERSITY | INFECTION | VIRUSES | KOLKATA | Metagenomics | Polyomaviridae - genetics | Humans | Leukocyte L1 Antigen Complex - metabolism | Middle Aged | Picobirnavirus - immunology | DNA, Viral - analysis | Male | Intestinal Diseases - immunology | Anelloviridae - immunology | Graft vs Host Disease - immunology | Picobirnavirus - genetics | Papillomaviridae - genetics | Transplantation, Homologous | Polyomaviridae - immunology | Young Adult | Papillomaviridae - immunology | Herpesviridae - genetics | Intestines - virology | Adult | Female | Anelloviridae - genetics | Severity of Illness Index | Risk Factors | Proportional Hazards Models | Hematopoietic Stem Cell Transplantation | Gastrointestinal Microbiome - genetics | Feces - chemistry | Adolescent | Herpesviridae - immunology | Aged | alpha 1-Antitrypsin - metabolism | Gastrointestinal Microbiome - immunology | Care and treatment | Microbiota (Symbiotic organisms) | Gastrointestinal diseases | Patient outcomes | Physiological aspects | Transplantation | Research | Hematopoietic stem cells | Graft-versus-host reaction | Inflammatory bowel diseases | Transplants & implants | Nucleotide sequence | Disease | Phages | Stem cell transplantation | Transplants | Viruses | Plastic surgery | Hazards | DNA viruses | Hemopoiesis | Gene sequencing | Confidence intervals | Eukaryotes | Intestine | Stem cells | Bacteria | Deoxyribonucleic acid--DNA
Journal Article
Scientific Reports, ISSN 2045-2322, 12/2017, Volume 7, Issue 1, pp. 1 - 12
We evaluated the performance of the MinION DNA sequencer in-flight on the International Space Station (ISS), and benchmarked its performance off-Earth against... 
METHYLATION | ALIGNMENT | MARS | MULTIDISCIPLINARY SCIENCES | IDENTIFICATION | RADIATION | SOFTWARE | REAL-TIME | Mitochondria | Conserved sequence | E coli | Nucleotide sequence | Genomes | Space flight | Environmental monitoring | Deoxyribonucleic acid--DNA | Space stations | DNA sequencing
Journal Article
Emerging Infectious Diseases, ISSN 1080-6040, 10/2017, Volume 23, Issue 10, pp. 1694 - 1698
We used unbiased metagenomic next-generation sequencing to diagnose a fatal case of meningoencephalitis caused by St. Louis encephalitis virus in a patient... 
INFECTIOUS DISEASES | IMMUNOLOGY | Genome, Viral | Encephalitis, St. Louis - diagnosis | Encephalitis, St. Louis - cerebrospinal fluid | Humans | Lymphoma, Mantle-Cell - pathology | Encephalitis, St. Louis - pathology | Male | California | Phylogeny | Reverse Transcriptase Polymerase Chain Reaction | Encephalitis, St. Louis - virology | Bronchopneumonia - diagnosis | Lymphoma, Mantle-Cell - diagnosis | Encephalitis Virus, St. Louis - genetics | Encephalitis Virus, St. Louis - classification | Fatal Outcome | Aged | Encephalitis Virus, St. Louis - isolation & purification | High-Throughput Nucleotide Sequencing | Bronchopneumonia - pathology | Metagenome | Medicine, Experimental | Medical research | Encephalitis | Nervous system diseases | RNA | Resveratrol | Care and treatment | Genetic aspects | Diagnosis | St. Louis encephalitis | Molecular diagnostic techniques | Innovations | viruses | St. Louis encephalitis virus | United States | meningitis | Dispatch | outbreak surveillance | Zika virus | metagenomic next-generation sequencing | SLEV | whole-genome viral sequencing | vector-borne infections | encephalitis | West Nile virus | arboviruses | Fatal Human Case of Mosquitoborne St. Louis Encephalitis Virus Infection Diagnosed by Metagenomic Sequencing, California, 2016 | flavivirus infections | mosquitoborne infections | mNGS
Journal Article
Journal Article
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 04/2015, Volume 43, Issue 7, pp. e46 - e46
Next-generation sequencing (NGS) approaches rapidly produce millions to billions of short reads, which allow pathogen detection and discovery in human... 
VELVET | ALGORITHMS | BIOCHEMISTRY & MOLECULAR BIOLOGY | TOOLS | Genome, Viral | Metagenomics | Genome, Bacterial | Sequence Analysis - methods | Viruses - genetics | Humans | Bacteria - genetics | Methods Online
Journal Article
Journal Article
The New England Journal of Medicine, ISSN 0028-4793, 06/2019, Volume 380, Issue 24, pp. 2327 - 2340
Journal Article