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2010, John Hopkins ed., ISBN 0801894824, x, 233
Book
Journal Article
Bioinformatics, ISSN 1367-4803, 01/2019, Volume 35, Issue 2, pp. 332 - 334
Abstract Summary Amino acid residues showing above background levels of conservation are often indicative of functionally significant regions within a protein.... 
BIOTECHNOLOGY & APPLIED MICROBIOLOGY | BIOCHEMICAL RESEARCH METHODS | MATHEMATICAL & COMPUTATIONAL BIOLOGY | Index Medicus | Applications Notes
Journal Article
Bioinformatics, ISSN 1367-4803, 02/2019, Volume 35, Issue 3, pp. 518 - 520
Abstract Summary TreeGrafter is a new software tool for annotating protein sequences using pre-annotated phylogenetic trees. Currently, the tool provides... 
BIOTECHNOLOGY & APPLIED MICROBIOLOGY | BIOCHEMICAL RESEARCH METHODS | MATHEMATICAL & COMPUTATIONAL BIOLOGY | TOOL | Applications Notes
Journal Article
Sports Medicine, ISSN 0112-1642, 9/2019, Volume 49, Issue 9, pp. 1309 - 1315
Journal Article
NUCLEIC ACIDS RESEARCH, ISSN 0305-1048, 07/2019, Volume 47, Issue W1, pp. W636 - W641
The EMBL-EBI provides free access to popular bioinformatics sequence analysis applications as well as to a full-featured text search engine with powerful... 
DATABASE | PERFORMANCE | BIOCHEMISTRY & MOLECULAR BIOLOGY | DISCOVERY | Web Server Issue
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 01/2019, Volume 47, Issue D1, pp. D564 - D572
Abstract Automatic annotation of protein function is routinely applied to newly sequenced genomes. While this provides a fine-grained view of an organism's... 
PATHWAYS | ANNOTATION | ENZYMES | BIOCHEMISTRY & MOLECULAR BIOLOGY | TIGRFAMS | KEGG | GENE ONTOLOGY | RESOURCE | Database Issue
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 7/2011, Volume 39, Issue suppl_2, pp. W29 - W37
HMMER is a software suite for protein sequence similarity searches using probabilistic methods. Previously, HMMER has mainly been available only as a... 
DATABASE | SERVICES | GENOMES | BIOCHEMISTRY & MOLECULAR BIOLOGY | PFAM | ACID SUBSTITUTION MATRICES | TOOLS | Sequence Alignment - methods | Sequence Analysis, Protein | Software | Internet | Index Medicus
Journal Article
Nucleic acids research, 01/2018, Volume 46, Issue D1, p. D335
The Rfam database is a collection of RNA families in which each family is represented by a multiple sequence alignment, a consensus secondary structure, and a... 
Journal Article
Nucleic acids research, 01/2016, Volume 44, Issue D1, p. D81
Repetitive DNA, especially that due to transposable elements (TEs), makes up a large fraction of many genomes. Dfam is an open access database of families of... 
Markov Chains | Humans | Molecular Sequence Annotation | DNA - classification | DNA Transposable Elements | DNA - chemistry | Sequence Alignment | Animals | Repetitive Sequences, Nucleic Acid | Mice | Internet | Genome | Databases, Nucleic Acid
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 01/2018, Volume 46, Issue D1, pp. D624 - D632
Abstract The MEROPS database (http://www.ebi.ac.uk/merops/) is an integrated source of information about peptidases, their substrates and inhibitors. The... 
20S PROTEASOME | EVOLUTIONARY FAMILIES | PROTEIN | ALIGNMENT | GENE | BIOCHEMISTRY & MOLECULAR BIOLOGY | CRYSTAL | Database Issue
Journal Article