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Current Opinion in Genetics & Development, ISSN 0959-437X, 2012, Volume 22, Issue 2, pp. 115 - 124
Advances in microscopy and genomic techniques have provided new insight into spatial chromatin organization inside of the nucleus. In particular, chromosome... 
Medical Education | POLYMER MODELS | ORGANIZATION | YEAST | INTERPHASE CHROMOSOMES | MITOTIC CHROMOSOMES | TRANSCRIPTION | TERRITORIES | GENETICS & HEREDITY | GENE-EXPRESSION | SEQUENCING REVEALS | IN-SITU | CELL BIOLOGY | Models, Molecular | Cell Nucleus - chemistry | Animals | Genetic Loci | Humans | Chromatin - chemistry | Polymers | Chromatin | Analysis
Journal Article
Epigenetics & Chromatin, ISSN 1756-8935, 03/2013, Volume 6, Issue S1, pp. P130 - P130
Journal Article
Biophysical Journal, ISSN 0006-3495, 01/2013, Volume 104, Issue 2, pp. 581a - 582a
Journal Article
Epigenetics & Chromatin, ISSN 1756-8935, 03/2013, Volume 6, Issue S1, pp. P129 - P129
  Doc number: P129 
Epigenetics | Genomes
Journal Article
Epigenetics & Chromatin, ISSN 1756-8935, 03/2013, Volume 6, Issue S1, pp. P127 - P127
  Doc number: P127 
Epigenetics | Gene expression
Journal Article
Science, ISSN 0036-8075, 11/2013, pp. 1 - 10
Journal Article
PLoS computational biology, 10/2014, Volume 10, Issue 10, p. e1003867
The classic model of eukaryotic gene expression requires direct spatial contact between a distal enhancer and a proximal promoter. Recent Chromosome... 
Chromatin - metabolism | Promoter Regions, Genetic - physiology | Computational Biology | Gene Expression Regulation - physiology | Protein Conformation | Enhancer Elements, Genetic - physiology | Models, Genetic | Chromatin - chemistry
Journal Article
PLoS Computational Biology, ISSN 1553-734X, 10/2014, Volume 10, Issue 10, p. e1003867
The classic model of eukaryotic gene expression requires direct spatial contact between a distal enhancer and a proximal promoter. Recent Chromosome... 
ORGANIZATION | INSULATORS | ACTIVATION | MECHANISM | GENOMES | LANDSCAPE | TRANSCRIPTION | BIOCHEMICAL RESEARCH METHODS | MATHEMATICAL & COMPUTATIONAL BIOLOGY | CONFORMATION | CHROMOSOMES | Chromatin | Promoters (Genetics) | Gene expression | Analysis | Studies | Insects | Simulation
Journal Article
PLoS Computational Biology, ISSN 1553-734X, 10/2014, Volume 10, Issue 10
  The classic model of eukaryotic gene expression requires direct spatial contact between a distal enhancer and a proximal promoter. Recent Chromosome... 
Studies | Chromatin | Insects | Simulation | Gene expression
Journal Article
01/2015, ISBN 9781339292557
The study of chromosome, and genome, organization is a both an ongoing challenge, and one with a long history. Following the advent of high-throughput... 
Biophysics
Dissertation
FEBS Letters, ISSN 0014-5793, 10/2015, Volume 589, Issue 20, pp. 3031 - 3036
Recently, Chromosome Conformation Capture (3C) based experiments have highlighted the importance of computational models for the study of chromosome... 
Model | Polymer | Chromatin | Simulation | Hi-C | HI-C REVEALS | BIOCHEMISTRY & MOLECULAR BIOLOGY | CONDENSIN | PRINCIPLES | CELL BIOLOGY | BIOPHYSICS | COLLAPSE | CONFORMATION CAPTURE | ARCHITECTURE | TOPOLOGICAL CONSTRAINTS | DOMAINS | GENOME ORGANIZATION | Chromatin - ultrastructure | Animals | Computer Simulation | Humans | Chromatin - physiology | Models, Molecular | Chromosome Mapping | Chromosomes | Analysis | Models
Journal Article
Cell, ISSN 0092-8674, 09/2015, Volume 163, Issue 1, p. 134
Mammalian interphase chromosomes interact with the nuclear lamina (NL) through hundreds of large lamina-associated domains (LADs). We report a method to map NL... 
Journal Article
Journal of Bioinformatics and Computational Biology, ISSN 0219-7200, 04/2016, Volume 14, Issue 2, p. 1641002
Three-dimensional (3D) organization of genomes a effects critical cellular processes such as transcription, replication, and deoxyribo nucleic acid (DNA)... 
Hi-C | chromosomes | translocations | yeasts | chromatin | Saccharomyces cerevisiae | Rearrangements | CELLS | BUDDING YEAST | MODEL | CANCER | 3D GENOME | MATHEMATICAL & COMPUTATIONAL BIOLOGY | ARCHITECTURE | Yeasts - genetics | Chromosomes, Fungal - chemistry | Algorithms | Chromosomes, Fungal - genetics | Saccharomyces cerevisiae - genetics | Gene Rearrangement
Journal Article
Nature, ISSN 0028-0836, 01/2016, Volume 529, Issue 7586, pp. 418 - 422
Metazoan genomes are spatially organized at multiple scales, from packaging of DNA around individual nucleosomes to segregation of whole chromosomes into... 
ORGANIZATION | VISUALIZATION | 3D GENOME | DOMAINS | MULTIDISCIPLINARY SCIENCES | PRINCIPLES | Chromosome Positioning |