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by Ötünçtemur, Alper and Çakır, Süleyman Sami and Dursun, Murat and Polat, Emre Can and Somay, Adnan and Somay, Adnan and Özbay, Nurver and Özbay, Nurver and Çekmen, Mustafa and Lee, Ming Chak and Brooks, Andrew and Drummond, Malcolm and Lau, Howard and Patel, Manish and Wang, Audrey and Woo, Henry and Kim, Hyun Jin and Averch, Timothy D and Averch, Timothy D and Kim, Hyung and Yildirim, Ibrahim and Tapan, Serkan and Aydur, Emin and Tahmaz, Lutfu and Dayanc, Murat and Olweny, Ephrem O and Faddegon, Stephen and Faddegon, Stephen and Best, Sara L and Jackson, Neil and Wehner, Eleanor F and Tan, Yung K and Tan, Yung K and Zuzak, Karel J and Cadeddu, Jeffrey A and Cadeddu, Jeffrey A and Cadeddu, Jeffrey A and Tan, Yung Khan and Olweny, Ephrem O and Liu, Zhou Wei and Kapur, Payal and Faddegon, Steve and Yin, Gang and Cadeddu, Jeffrey and Park, Jane Hyeon and Castillo, Josefino Cortez and Morales Jr, Marcelino Lopeztan and Colli, Janet and Wang, Zijun and Keel, Christopher and Lee, Benjamin R and Dilli, Alper and Zengin, Kürşad and Yalçınkaya, Fatih and Yiğitbaşı, Orhan and Sertçelik, Memduh Nurettin and Arıdoğan, Ibrahim Atilla and Izol, Volkan and Acıkalın, Arbil and Abat, Deniz and Tuli, Abdullah and Bayazıt, Yıldırım and Resorlu, Berkan and Unsal, Ali and Saitz, Theodore and Grossman, Leah and Dorsey, Philip and Pedersen, Ditte and Lund, Martin and Marcussen, Niels and Lund, Lars and Graversen, Joseph A and Wikenheiser, Jamie and Kerkoutian, Susan and Abdelshehid, Corollos and Abdelshehid, Corollos and Alipanah, Reza and Quach, Stephen and Zarraga, Jerome P and Gerbatsch, Isabelle and Huang, Jiaoti and Landman, Jaime and Landman, Jaime and Kyriazis, Iason and Kagadis, George and Loudos, George and Kallidonis, Panagiotis and Kallidonis, Panagiotis and Georgiopoulos, Ioannis and Liourdi, Despoina and Apostolopoulos, Dimitris and Nikiforidis, George and Liatsikos, Evangelos and Liatsikos, Evangelos and Fishman, Andrew and Dorai, Thambi and Dorai, Thambi and Ding, Cheng and Haberle, Ines Batinic and Grasso, Michael and ...
Journal of Endourology, ISSN 0892-7790, 09/2012, Volume 26, Issue S1, pp. P1 - A572
Journal Article
by Costello, James C and Heiser, Laura M and Georgii, Elisabeth and Gönen, Mehmet and Menden, Michael P and Wang, Nicholas J and Bansal, Mukesh and Ammad-Ud-Din, Muhammad and Hintsanen, Petteri and Khan, Suleiman A and Mpindi, John-Patrick and Kallioniemi, Olli and Honkela, Antti and Aittokallio, Tero and Wennerberg, Krister and Collins, James J and Gallahan, Dan and Singer, Dinah and Saez-Rodriguez, Julio and Kaski, Samuel and Gray, Joe W and Stolovitzky, Gustavo and Abbuehl, Jean-Paul and Allen, Jeffrey and Altman, Russ B and Balcome, Shawn and Battle, Alexis and Bender, Andreas and Berger, Bonnie and Bernard, Jonathan and Bhattacharjee, Madhuchhanda and Bhuvaneshwar, Krithika and Bieberich, Andrew A and Boehm, Fred and Califano, Andrea and Chan, Christina and Chen, Beibei and Chen, Ting-Huei and Choi, Jaejoon and Coelho, Luis Pedro and Cokelaer, Thomas and Collins, James C and Creighton, Chad J and Cui, Jike and Dampier, Will and Davisson, V. Jo and De Baets, Bernard and Deshpande, Raamesh and DiCamillo, Barbara and Dundar, Murat and Duren, Zhana and Ertel, Adam and Fan, Haoyang and Fang, Hongbin and Gauba, Robinder and Gottlieb, Assaf and Grau, Michael and Gusev, Yuriy and Ha, Min Jin and Han, Leng and Harris, Michael and Henderson, Nicholas and Hejase, Hussein A and Homicsko, Krisztian and Hou, Jack P and Hwang, Woochang and IJzerman, Adriaan P and Karacali, Bilge and Keles, Sunduz and Kendziorski, Christina and Kim, Junho and Kim, Min and Kim, Youngchul and Knowles, David A and Koller, Daphne and Lee, Junehawk and Lee, Jae K and Lenselink, Eelke B and Li, Biao and Li, Bin and Li, Jun and Liang, Han and Ma, Jian and Madhavan, Subha and Mooney, Sean and Myers, Chad L and Newton, Michael A and Overington, John P and Pal, Ranadip and Peng, Jian and Pestell, Richard and Prill, Robert J and Qiu, Peng and Rajwa, Bartek and Sadanandam, Anguraj and Sambo, Francesco and Shin, Hyunjin and Song, Jiuzhou and Song, Lei and Sridhar, Arvind and ... and NCI DREAM Community
Nature Biotechnology, ISSN 1087-0156, 12/2014, Volume 32, Issue 12, pp. 1202 - 1212
Journal Article
Pattern Recognition, ISSN 0031-3203, 03/2013, Volume 46, Issue 3, pp. 795 - 807
Instead of selecting a single kernel, multiple kernel learning (MKL) uses a weighted sum of kernels where the weight of each kernel is optimized during... 
Support vector machines | Regression | Multiple kernel learning | Selective attention | Support vector regression | Classification | COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE | VECTOR MACHINES | ENGINEERING, ELECTRICAL & ELECTRONIC | Algorithms | Data mining | Mathematical optimization | Analysis | Kernels | Learning | Detectors | Images | Gating and risering
Journal Article
Journal of Machine Learning Research, ISSN 1532-4435, 07/2011, Volume 12, pp. 2211 - 2268
In recent years, several methods have been proposed to combine multiple kernels instead of using a single one. These different kernels may correspond to using... 
Support vector machines | Multiple kernel learning | Kernel machines | support vector machines | PROTEIN FOLD RECOGNITION | CLASSIFICATION | COMBINATION | COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE | DATA FUSION | kernel machines | multiple kernel learning | INTEGRATION | MATRICES | SEQUENCE | FRAMEWORK | SUPPORT VECTOR MACHINE | AUTOMATION & CONTROL SYSTEMS
Journal Article
Bioinformatics, ISSN 1367-4803, 09/2014, Volume 30, Issue 17, pp. i556 - i563
Journal Article
Bioinformatics, ISSN 1367-4803, 07/2018, Volume 34, Issue 13, pp. i412 - i421
Abstract Motivation Identifying molecular mechanisms that drive cancers from early to late stages is highly important to develop new preventive and therapeutic... 
BREAST-CANCER | RANDOM FORESTS | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | BIOCHEMICAL RESEARCH METHODS | MATHEMATICAL & COMPUTATIONAL BIOLOGY | Ismb 2018–Intelligent Systems for Molecular Biology Proceedings
Journal Article
Pattern Recognition Letters, ISSN 0167-8655, 03/2014, Volume 38, Issue 1, pp. 132 - 141
Coupled training of dimensionality reduction and classification is proposed previously to improve the prediction performance for single-label problems.... 
Dimensionality reduction | Automatic relevance determination | Variational approximation | Supervised learning | Semi-supervised learning | Multilabel learning | COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE | Analysis | Algorithms
Journal Article
Proteins: Structure, Function, and Bioinformatics, ISSN 0887-3585, 06/2019, Volume 87, Issue 6, pp. 512 - 519
Missense mutations have various effects on protein structures, also leading to distorted protein dynamics that plausibly affects the function. We hypothesized... 
cancer | hinge residues | missense mutation | protein dynamics | BIOCHEMISTRY & MOLECULAR BIOLOGY | MECHANISMS | PREDICTION | LYSINE 27 | BIOPHYSICS | INTEGRATION | ALIGNMENT | HISTONE H3 | DISORDER | HYPERTRIMETHYLATION | BINDING | EZH2 | Genetic aspects | Analysis | Genes | Cancer | Proteins | Dynamic structural analysis | Residues | Missense mutation | Data banks | Tumor suppressor genes | RhoA protein | Mutation | Tumors
Journal Article
IEEE Transactions on Knowledge and Data Engineering, ISSN 1041-4347, 10/2013, Volume 25, Issue 10, pp. 2381 - 2389
Journal Article
Bioinformatics (Oxford, England), ISSN 1367-4803, 05/2019
Survival analysis methods that integrate pathways/gene sets into their learning model could identify molecular mechanisms that determine survival... 
Journal Article
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 05/2018, Volume 115, Issue 21, pp. 5462 - 5467
The Fbw7 (F-box/WD repeat-containing protein 7) ubiquitin ligase targetsmultiple oncoproteins for degradation and is commonlymutated in cancers. Like other... 
Ubiquitin | Metabolism | Fbw7 | Informatics | Genomics | SUBSTRATE DEGRADATION | UBIQUITIN LIGASE | FBXW7 | PHOSPHORYLATION | MULTIDISCIPLINARY SCIENCES | ALPHA | MECHANISMS | informatics | TUMORS | ubiquitin | SERINE | genomics | metabolism | LEUKEMIA | TUMORIGENESIS | Gene mutations | Cancer cells | Physiological aspects | Cell metabolism | Genetic aspects | Genetic transcription | Health aspects | Biological Sciences
Journal Article
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