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Tuberculosis, ISSN 1472-9792, 03/2019, Volume 115, pp. 14 - 23
A collection of over 1600 sequenced bacteriophages isolated on a single host strain, mc 155, can be grouped into over two dozen types that have little or no... 
IMMUNITY | MICROBIOLOGY | IMMUNOLOGY | RESPIRATORY SYSTEM | TUBERCULOSIS | SUSCEPTIBILITY | RNA sequencing | Gene expression | Genes | Analysis | Bacteriophages | Phenotypes | Similarity | Nucleotide sequence | Phages | Gene regulation | Lysogeny | Immunity | Tuberculosis | Clonal deletion | Clusters | Deletion | Superinfection
Journal Article
mBio, ISSN 2150-7511, 03/2019, Volume 10, Issue 2, p. e00196-19
The arms race between bacteria and their bacteriophages profoundly influences microbial evolution. With an estimated 1023 phage infections occurring per... 
Mycobacterium | bacteriophage | viral defense | GENOMICS | ACQUISITION | MICROBIOLOGY | DIVERSITY | PHAGE ABORTIVE INFECTION | EXPRESSION | Mycobacteriophages - physiology | Mycobacterium smegmatis - virology | Host-Parasite Interactions | Mycobacterium smegmatis - physiology | Lysogeny | Prophages - physiology
Journal Article
PLoS ONE, ISSN 1932-6203, 07/2012, Volume 7, Issue 7, p. e42369
Defining context specific requirements for proteins and pathways is a major challenge in the study of signal transduction. For example, the stress-activated... 
DORSAL CLOSURE | OXIDATIVE STRESS | ACTIVATED PROTEIN-KINASE | INDUCED APOPTOSIS | MULTIDISCIPLINARY SCIENCES | N-TERMINAL KINASE | GENE-EXPRESSION | EXTENDS LIFE-SPAN | P38 MAPK PATHWAYS | SIGNAL-TRANSDUCTION PATHWAY | PLANAR POLARITY | Embryo, Nonmammalian - cytology | Phosphorylation | Drosophila melanogaster - physiology | Humans | Serine | Embryo, Nonmammalian - metabolism | Molecular Sequence Data | Proline | JNK Mitogen-Activated Protein Kinases - metabolism | Male | Drosophila Proteins - metabolism | MAP Kinase Signaling System | MAP Kinase Kinase Kinases - chemistry | Conserved Sequence | Female | Embryo, Nonmammalian - physiology | Binding Sites | Amino Acid Sequence | Drosophila melanogaster - cytology | MAP Kinase Kinase Kinases - metabolism | Drosophila Proteins - chemistry | Longevity | Amino Acid Motifs | Heat-Shock Response | Animals | Drosophila melanogaster - enzymology | Drosophila melanogaster - growth & development | Mice | Cellular signal transduction | Mitogens | Protein kinases | Drosophila | Shock | Oxidative stress | Homeostasis | Kinases | Phosphatase | Tissues | Proteins | Signal transduction | Cell growth | Pathways | Rodents | Genetic analysis | Heat stress | Localization | Transgenes | Transducers | MAP kinase | JNK protein | Gene expression | Insulin | Mutants | Signaling | Insects | Heat tolerance | Transduction | Adults | Heat shock | Apoptosis
Journal Article
Genetics, ISSN 0016-6731, 06/2014, Volume 197, Issue 2, pp. 497 - 497
A highly diverse set of protein kinases functions as early responders in the mitogen- and stress-activated protein kinase (MAPK/SAPK) signaling pathways. For... 
Journal Article
Genome Announcements, ISSN 2169-8287, 11/2017, Volume 5, Issue 45
Bacteriophages AlleyCat, Edugator, and Guillsminger were isolated on mc 155 from enriched soil samples. All are members of mycobacteriophage subcluster K5,... 
Science education | Genomes | Biology | Genomics | Genes | Deoxyribonucleic acid--DNA
Journal Article
Journal Article
Genome Announcements, ISSN 2169-8287, 11/2017, Volume 5, Issue 45
Caterpillar, Nightmare, and Teacup are cluster AU siphoviral phages isolated from enriched soil on sp. strain ATCC 21022. These genomes are 58 kbp long with an... 
Proteins | Science education | Genomes | Biology | Genes | Deoxyribonucleic acid--DNA
Journal Article
Genome Announcements, ISSN 2169-8287, 2017, Volume 5, Issue 28
Mycobacteriophage CrystalP is a newly isolated phage infecting strain mc 155. CrystalP has a 76,483-bp genome and is predicted to contain 143 protein-coding... 
Proteins | Science education | Genomes | Genomics | Genes | Deoxyribonucleic acid--DNA
Journal Article
Journal of Cell Science, ISSN 0021-9533, 09/2010, Volume 123, Issue 18, pp. 3177 - 3188
Normal cells respond appropriately to various signals, while sustaining proper developmental programs and tissue homeostasis. Inappropriate signal reception,... 
Journal Article
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 12/2017, Volume 114, Issue 51, p. 13531
Engaging undergraduate students in scientific research promises substantial benefits, but it is not accessible to all students and is rarely implemented early... 
Science education | Higher education | Students | Education | Genomics | Socioeconomic factors | Phages | Socio-economic aspects | College students | Community relations | Ethnic factors
Journal Article
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 12/2017, Volume 114, Issue 51, pp. 13531 - 13536
Engaging undergraduate students in scientific research promises substantial benefits, but it is not accessible to all students and is rarely implemented early... 
Evolution | Science education | Bacteriophage | Genomics | Assessment | assessment | INTEGRATION | science education | PERSISTENCE | MULTIDISCIPLINARY SCIENCES | IMPLEMENTATION | genomics | evolution | bacteriophage | UNDERGRADUATE RESEARCH EXPERIENCES | Sciences education | Methods | Biological Sciences
Journal Article
by Klyczek, Karen K and Bonilla, J. Alfred and Jacobs-Sera, Deborah and Adair, Tamarah L and Afram, Patricia and Allen, Katherine G and Archambault, Megan L and Aziz, Rahat M and Bagnasco, Filippa G and Ball, Sarah L and Barrett, Natalie A and Benjamin, Robert C and Blasi, Christopher J and Borst, Katherine and Braun, Mary A and Broomell, Haley and Brown, Conner B and Brynell, Zachary S and Bue, Ashley B and Burke, Sydney O and Casazza, William and Cautela, Julia A and Chen, Kevin and Chimalakonda, Nitish S and Chudoff, Dylan and Connor, Jade A and Cross, Trevor S and Curtis, Kyra N and Dahlke, Jessica A and Deaton, Bethany M and Degroote, Sarah J and Denigris, Danielle M and Deruff, Katherine C and Dolan, Milan and Dunbar, David and Egan, Marisa S and Evans, Daniel R and Fahnestock, Abby K and Farooq, Amal and Finn, Garrett and Fratus, Christopher R and Gaffney, Bobby L and Garlena, Rebecca A and Garrigan, Kelly E and Gibbon, Bryan C and Goedde, Michael A and Guerrero Bustamante, Carlos A and Harrison, Melinda and Hartwell, Megan C and Heckman, Emily L and Huang, Jennifer and Hughes, Lee E and Hyduchak, Kathryn M and Jacob, Aswathi E and Kaku, Machika and Karstens, Allen W and Kenna, Margaret A and Khetarpal, Susheel and King, Rodney A and Kobokovich, Amanda L and Kolev, Hannah and Konde, Sai A and Kriese, Elizabeth and Lamey, Morgan E and Lantz, Carter N and Lapin, Jonathan S and Lawson, Temiloluwa O and Lee, In Young and Lee, Scott M and Lee-Soety, Julia Y and Lehmann, Emily M and London, Shawn C and Lopez, A. Javier and Lynch, Kelly C and Mageeney, Catherine M and Martynyuk, Tetyana and Mathew, Kevin J and Mavrich, Travis N and McDaniel, Christopher M and McDonald, Hannah and McManus, C. Joel and Medrano, Jessica E and Mele, Francis E and Menninger, Jennifer E and Miller, Sierra N and Minick, Josephine E and Nabua, Courtney T and Napoli, Caroline K and Nkangabwa, Martha and Oates, Elizabeth A and Ott, Cassandra T and Pellerino, Sarah K and Pinamont, William J and Pirnie, Ross T and Pizzorno, Marie C and Plautz, Emilee J and Pope, Welkin H and Pruett, Katelyn M and Rickstrew, Gabbi and Rimple, Patrick A and ...
PLoS ONE, ISSN 1932-6203, 07/2017, Volume 12, Issue 7, p. e0180517
Journal Article
Genome Announcements, ISSN 2169-8287, 2016, Volume 4, Issue 5
Here, we report the complete genome sequence of Gordonia terrae 3612, also known by the strain designations ATCC 25594, NRRL B-16283, and NBRC 100016. The... 
Journal Article