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1. Full Text European guidelines on the clinical management of HIV-1 tropism testing
by Vandekerckhove, LPR, MD and Wensing, AMJ, MD and Kaiser, R, MD and Brun-Vézinet, F, Prof and Clotet, B, MD and De Luca, A, MD and Dressler, S, MD and Garcia, F, PhD and Geretti, AM, MD and Klimkait, T, Prof and Korn, K, MD and Masquelier, B, PharmD and Perno, CF, Prof and Schapiro, JM, MD and Soriano, V, Prof and Sönnerborg, A, Prof and Vandamme, A-M, Prof and Verhofstede, C, PhD and Walter, H, MD and Zazzi, M, MSc and Boucher, CAB, Prof and European Consensus Grp Clinical and European Consensus Group on clinical management of tropism testing
Lancet Infectious Diseases, The, ISSN 1473-3099, 2011, Volume 11, Issue 5, pp. 394 - 407
Summary Viral tropism is the ability of viruses to enter and infect specific host cells and is based on the ability of viruses to bind to receptors on those... 
Infectious Disease | INFECTIOUS DISEASES | PHENOTYPIC ASSAY | CORECEPTOR USE | TREATMENT-EXPERIENCED PATIENTS | IMMUNODEFICIENCY-VIRUS TYPE-1 | LARGE POPULATION | GENOTYPIC PREDICTION | ANTIRETROVIRAL THERAPY | CCR5 ANTAGONISTS | TREATED PATIENTS | CCR5-TROPIC HIV-1 | HIV-1 - physiology | Humans | Anti-HIV Agents - therapeutic use | HIV Infections - drug therapy | HIV-1 - genetics | Practice Guidelines as Topic | Viral Tropism - genetics | Viral Tropism - physiology
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2. Full Text Low-Frequency HIV-1 Drug Resistance Mutations and Risk of NNRTI-Based Antiretroviral Treatment Failure: A Systematic Review and Pooled Analysis
by Li, Jonathan Z and Paredes, Roger and Ribaudo, Heather J and Svarovskaia, Evguenia S and Metzner, Karin J and Kozal, Michael J and Hullsiek, Kathy Huppler and Balduin, Melanie and Jakobsen, Martin R and Geretti, Anna Maria and Thiebaut, Rodolphe and Ostergaard, Lars and Masquelier, Bernard and Johnson, Jeffrey A and Miller, Michael D and Kuritzkes, Daniel R
JAMA, ISSN 0098-7484, 04/2011, Volume 305, Issue 13, pp. 1327 - 1335
CONTEXT Presence of low-frequency, or minority, human immunodeficiency virus type 1 (HIV-1) drug resistance mutations may adversely affect response to... 
MEDICINE, GENERAL & INTERNAL | MINORITY VARIANTS | IMPACT | TRANSMISSION | THERAPY | REVERSE-TRANSCRIPTASE | EFAVIRENZ | POPULATIONS | INFECTED PATIENTS | TREATMENT-NAIVE PATIENTS | ADHERENCE | Drug Resistance, Viral - genetics | Humans | Treatment Failure | Anti-Retroviral Agents - pharmacology | HIV Infections - drug therapy | Risk | Mutation | HIV-1 - genetics | Case-Control Studies | Cohort Studies | Antiretroviral drugs | Systematic review | Drug resistance | Human immunodeficiency virus--HIV | Risk factors
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3. Full Text Impact of Minority Nonnucleoside Reverse Transcriptase Inhibitor Resistance Mutations on Resistance Genotype After Virologic Failure
by Jonathan Z. Li and Roger Paredes and Heather J. Ribaudo and Michael J. Kozal and Evguenia S. Svarovskaia and Jeffrey A. Johnson and Anna Maria Geretti and Karin J. Metzner and Martin R. Jakobsen and Katherine Huppler Hullsiek and Lars Ostergaard and Michael D. Miller and Daniel R. Kuritzkes
The Journal of Infectious Diseases, ISSN 0022-1899, 3/2013, Volume 207, Issue 6, pp. 893 - 897
Drug-resistant human immunodeficiency virus type 1 (HIV-1) minority variants increase the risk of virologic failure for first-line nonnucleoside reverse... 
HIV/AIDS | Antiretrovirals | HIV | Drug evaluation | AIDS | Reverse transcriptase inhibitors | Drug resistance | Genetic mutation | Disease risks | Virology | HIV 1 | virologic failure | resistance genotyping | HIV-1 drug resistance | minority variants | HIV-1 | INFECTIOUS DISEASES | VARIANTS | MICROBIOLOGY | DRUG-RESISTANCE | IMMUNOLOGY | NEVIRAPINE | ESCAPE | TREATMENT-NAIVE | ACTIVE ANTIRETROVIRAL THERAPY | EFAVIRENZ | Viral drug resistance | Care and treatment | Gene mutations | Genetic aspects | Dosage and administration | Research | HIV infection | Major and Brief Reports
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4. Full Text Risk of HIV transmission through condomless sex in serodifferent gay couples with the HIV-positive partner taking suppressive antiretroviral therapy (PARTNER): final results of a multicentre, prospective, observational study
by Rodger, Alison J and Cambiano, Valentina and Bruun, Tina and Vernazza, Pietro and Collins, Simon and Degen, Olaf and Corbelli, Giulio Maria and Estrada, Vicente and Estrada, Vicente P and Geretti, Anna Maria and Beloukas, Apostolos and Raben, Dorthe and Coll, Pep and Antinori, Andrea and Nwokolo, Nneka and Rieger, Armin and Prins, Jan M and Prins, Jan and Blaxhult, Anders and Weber, Rainer and Van Eeden, Arne and Brockmeyer, Norbert and Brockmeyer, Norbert H and Clarke, Amanda and del Romero Guerrero, Jorge and Raffi, Francois and Bogner, Johannes R and Bogner, Johannes and Wandeler, Gilles and Gerstoft, Jan and Gutiérrez, Felix and Brinkman, Kees and Kitchen, Maria and Ostergaard, Lars and Leon, Agathe and Ristola, Matti and Jessen, Heiko and Jessen, Arne and Stellbrink, Hans-Jürgen and Phillips, Andrew N and Lundgren, Jens and Cobarsi, Patricia and Nieto, Aroa and Meulbroek, Michael and Carrillo, Antonia and Saz, Jorge and Guerrero, Jorge D.R and García, Mar Vera and Masiá, Mar and Robledano, Catalina and Leal, Lorna and Redondo, Eva G and Marquez, Rocio and Sandoval, Raquel and Viciana, Pompeyo and Espinosa, Nuria and Lopez-Cortes, Luis and Podzamczer, Daniel and Tiraboschi, Juan and Morenilla, Sandra and Antela, Antonio and Losada, Elena and Sewell, Janey and Kirk, Sarah and Knott, Alyson and Fernandez, Thomas and Gompels, Mark and Jennings, Louise and Ward, Lana and Fox, Julie and Lwanga, Julianne and Lee, Ming and Gilson, Richard and Leen, Clifford and Morris, Sheila and Clutterbuck, Dan and Brady, Michael and Asboe, David and Fedele, Serge and Fidler, Sarah and Potthoff, Anja and Skaletz-Rorowski, Adriane and Seybold, Ulrich and Roider, Julia and Ruzicic, Slobodan and Kümmerle, Tim and Lehmann, Clara and Bartel, Sindy and Hüfner, Anja and Rockstroh, Jürgen and Mohrmann, Karina and Boesecke, Christoph and Krznaric, Ivanka and Ingiliz, Patrick and Grube, Christina and Braun, Dominique and Günthard, Huldrych and Furrer, Hansjakob and Rauch, Andri and Schmid, Patrick and ... and PARTNER Study Grp and PARTNER Study Group
The Lancet, ISSN 0140-6736, 06/2019, Volume 393, Issue 10189, pp. 2428 - 2438
The level of evidence for HIV transmission risk through condomless sex in serodifferent gay couples with the HIV-positive partner taking virally suppressive... 
VIRAL LOAD | MEDICINE, GENERAL & INTERNAL | RNA | HETEROSEXUAL TRANSMISSION | BLOOD-PLASMA | SEMEN | PREVENTION | INFECTION | SERODISCORDANT COUPLES | HIV patients | Disease transmission | HIV (Viruses) | Gay couples | Risk factors | Therapy | Sexually transmitted diseases--STD | Prophylaxis | Sex | Risk | Partnerships | Infections | Phylogeny | Incidence | Mathematical analysis | Antiretroviral agents | Human immunodeficiency virus--HIV | Drug therapy | Anal sex | Antiretroviral drugs | Sexual behavior | Health risks | Exposure | Ribonucleic acid--RNA | Seroconversion | Antiretroviral therapy | Studies | Data collection | Gays & lesbians | Condoms
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5. Full Text Socioeconomic status and treatment outcomes for individuals with HIV on antiretroviral treatment in the UK: cross-sectional and longitudinal analyses
by Burch, Lisa S and Smith, Colette J and Anderson, Jane and Sherr, Lorraine and Rodger, Alison J and O'Connell, Rebecca and Geretti, Anna-Maria and Gilson, Richard and Fisher, Martin and Elford, Jonathan and Jones, Martin and Collins, Simon and Azad, Yusef and Phillips, Andrew N and Speakman, Andrew and Johnson, Margaret A and Lampe, Fiona C and Antiretrovirals Sexual Transmissio
The Lancet Public Health, ISSN 2468-2667, 11/2016, Volume 1, Issue 1, pp. e26 - e36
Few studies have assessed the effect of socioeconomic status on HIV treatment outcomes in settings with universal access to health care. Here we aimed to... 
PUBLIC, ENVIRONMENTAL & OCCUPATIONAL HEALTH
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6. Full Text Incidence, aetiology, and sequelae of viral meningitis in UK adults: a multicentre prospective observational cohort study
by McGill, Fiona and Griffiths, Michael J and Bonnett, Laura J and Geretti, Anna Maria and Michael, Benedict D and Beeching, Nicholas J and McKee, David and Scarlett, Paula and Hart, Ian J and Mutton, Kenneth J and Jung, Agam and Adan, Guleed and Gummery, Alison and Sulaiman, Wan Aliaa Wan and Ennis, Katherine and Martin, Antony P and Martin, Wiselka and Martin, Mostert and Haycox, Alan and Miller, Alastair and Solomon, Tom and Adedeji, Adekola and Katharine, Ajdukiewicz and David, Chadwick and David, Birkenhead and Thomas, Blanchard and Antony, Cadwgan and John, Cheesbrough and John, Croall and Richard, Cooke and Iain, Crossingham and James, Dunbar and Simon, Ellis and Camelia, Faris and Peter, Flegg and Clive, Graham and Katherine, Gray and Shirley, Hammersley and Kevin, Jones and Matthew, Jones and Ildiko, Kustos and Susan, Larkin and Karim, Mahawish and Sarah, Maxwell and Jane, Minton and Kavya, Mohandas and Ed, Moran and Christopher, Murphy and Monika, Pasztor and Hassan, Paraiso and Nikhil, Premchand and Haris, Rathur and Mark, Roberts and Amy, Robinson and Andrew, Rosser and Stefan, Schumacher and Monty, Silverdale and Philip, Stanley and Neil, Todd and Alastair, Watt and UK Meningitis Study Investigators
The Lancet Infectious Diseases, ISSN 1473-3099, 09/2018, Volume 18, Issue 9, pp. 992 - 1003
Viral meningitis is increasingly recognised, but little is known about the frequency with which it occurs, or the causes and outcomes in the UK. We aimed to... 
IMMUNOCOMPETENT ADULTS | DIAGNOSIS | INFECTIOUS DISEASES | POLYMERASE-CHAIN-REACTION | MANAGEMENT | ACUTE BACTERIAL-MENINGITIS | ENTEROVIRAL MENINGITIS | ASEPTIC-MENINGITIS | CENTRAL-NERVOUS-SYSTEM | CEREBROSPINAL-FLUID | CONSENSUS STATEMENT | Viral meningitis | Pathogens | Encephalitis | Aseptic meningitis | Laboratories | Health | Complications | Chicken pox | Viruses | Patients | Epidemiology | Blood | Morbidity | Incidence | Streptococcus infections | Proteins | Studies | Antibiotics | Herpes viruses | Population | Meningitis | Adults | Ventricle | Blood culture | Viral infections
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7. Full Text Single-Cell Quantitative HER2 Measurement Identifies Heterogeneity and Distinct Subgroups within Traditionally Defined HER2-Positive Patients
by Onsum, Matthew D and Geretti, Elena and Paragas, Violette and Kudla, Arthur J and Moulis, Sharon P and Luus, Lia and Wickham, Thomas J and McDonagh, Charlotte F and MacBeath, Gavin and Hendriks, Bart S
American Journal of Pathology, The, ISSN 0002-9440, 2013, Volume 183, Issue 5, pp. 1446 - 1460
Human epidermal growth factor receptor 2 (HER2) is an important biomarker for breast and gastric cancer prognosis and patient treatment decisions. HER2... 
Pathology | BREAST-CANCER | INDUCED ACTIVATION | TRASTUZUMAB | PROTEIN EXPRESSION | POLYSOMY 17 | IN-SITU HYBRIDIZATION | GENE AMPLIFICATION | HER-2/NEU | ANTIBODY | PATHOLOGY | CARCINOMA | Neoplasms - metabolism | Urinary Bladder Neoplasms - classification | Tissue Array Analysis | Humans | Receptor, ErbB-2 - metabolism | Stomach Neoplasms - metabolism | Stomach Neoplasms - pathology | Breast Neoplasms - metabolism | Reference Standards | Single-Cell Analysis - methods | Urinary Bladder Neoplasms - pathology | Female | Stomach Neoplasms - classification | Urinary Bladder Neoplasms - metabolism | Breast Neoplasms - classification | Reproducibility of Results | Neoplasms - classification | Genetic Heterogeneity | Animals | Breast Neoplasms - pathology | Mice, Nude | Fluorescent Antibody Technique | Cell Line, Tumor | Mice | Neoplasms - pathology | Cluster Analysis
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8. Full Text Health-related quality-of-life of people with HIV in the era of combination antiretroviral treatment: a cross-sectional comparison with the general population
by Miners, Alec, Dr and Phillips, Andrew, Prof and Kreif, Noemi, PhD and Rodger, Alison, MD and Speakman, Andrew, PhD and Fisher, Martin, Prof and Anderson, Jane, Prof and Collins, Simon and Hart, Graham, Prof and Sherr, Lorraine, Prof and Lampe, Fiona C, PhD and ASTRA Antiretrovirals Sexual and ASTRA (Antiretrovirals, Sexual Transmission and Attitudes) Study
Lancet HIV, The, ISSN 2352-3018, 2014, Volume 1, Issue 1, pp. e32 - e40
Summary Background Combination antiretroviral therapy has substantially increased life-expectancy in people living with HIV, but the effects of chronic... 
Infectious Disease | INFECTIOUS DISEASES | INFECTION | IMMUNOLOGY | BURDEN
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9. Full Text Role of the coinhibitory receptor cytotoxic T lymphocyte antigen‐4 on apoptosis‐Prone CD8 T cells in persistent hepatitis B virus infection
by Schurich, Anna and Khanna, Pooja and Lopes, A. Ross and Han, Ki Jun and Peppa, Dimitra and Micco, Lorenzo and Nebbia, Gaia and Kennedy, Patrick T.F and Geretti, Anna‐Maria and Dusheiko, Geoffrey and Maini, Mala K
Hepatology, ISSN 0270-9139, 05/2011, Volume 53, Issue 5, pp. 1494 - 1503
An excess of coinhibitory signals has been proposed to drive the T‐cell exhaustion characteristic of persistent viral infections. In this study we examined the... 
POPULATION | RESPONSES | LIVER | CTLA-4 | DEFINES | GASTROENTEROLOGY & HEPATOLOGY | DELETION | Hepatitis B, Chronic - immunology | Humans | Middle Aged | Cells, Cultured | Male | CD8-Positive T-Lymphocytes - physiology | CTLA-4 Antigen | Young Adult | Adult | Antigens, CD - physiology | Female | Aged | Apoptosis - physiology | Hepatitis | Antigens | Cytotoxicity | Interferon | Lymphocytes | Viral infections
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10. Full Text Recreational drug use, polydrug use, and sexual behaviour in HIV-diagnosed men who have sex with men in the UK: results from the cross-sectional ASTRA study
by Daskalopoulou, Marina, Dr and Rodger, Alison, PhD and Phillips, Andrew N, Prof and Sherr, Lorraine, Prof and Speakman, Andrew, PhD and Collins, Simon and Elford, Jonathan, Prof and Johnson, Margaret A, Prof and Gilson, Richard, FRCP and Fisher, Martin, Prof and Wilkins, Ed, FRCP and Anderson, Jane, Prof and McDonnell, Jeffrey, MSc and Edwards, Simon, FRCP and Perry, Nicky, MSc and O'Connell, Rebecca, FRCP and Lascar, Monica, MRCP and Jones, Martin, MSc and Johnson, Anne M, Prof and Hart, Graham, Prof and Miners, Alec, PhD and Geretti, Anna-Maria, PhD and Burman, William J, Prof and Lampe, Fiona C, PhD
Lancet HIV, The, ISSN 2352-3018, 2014, Volume 1, Issue 1, pp. e22 - e31
Summary Background Recreational drug use in men who have sex with men (MSM) is of concern because it might be linked to the transmission of HIV and other... 
Infectious Disease | BISEXUAL MEN | CRYSTAL METHAMPHETAMINE | CLUB DRUGS | INFECTIOUS DISEASES | TRANSMISSION | SUBSTANCE USE | IMMUNOLOGY | GAY MEN | RISK BEHAVIOR | POSITIVE MEN
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11. Full Text Prevalence and determinants of transmitted antiretroviral drug resistance in HIV-1 infection
by Booth, Clare L and Geretti, Anna Maria
Journal of Antimicrobial Chemotherapy, ISSN 0305-7453, 06/2007, Volume 59, Issue 6, pp. 1047 - 1056
Transmission of drug-resistant HIV-1 variants from antiretroviral treatment-experienced persons has been documented to occur through multiple routes, including... 
Primary resistance | Newly diagnosed | HAART | Anti-HIV Agents - pharmacology | Drug Resistance, Viral - genetics | Guidelines as Topic | HIV-1 - drug effects | HIV Infections - diagnosis | HIV Infections - epidemiology | HIV Infections - genetics | HIV Infections - virology | Humans | CD4 Lymphocyte Count | HIV-1 - genetics | INFECTIOUS DISEASES | MULTIDRUG-RESISTANT | primary resistance | MICROBIOLOGY | HUMAN-IMMUNODEFICIENCY-VIRUS | NATURAL-HISTORY | newly diagnosed | NAIVE INDIVIDUALS | REVERSE-TRANSCRIPTASE INHIBITORS | PRIMARY GENOTYPIC RESISTANCE | SURVEILLANCE PROGRAM | NON-B SUBTYPES | HIV-1-INFECTED PERSONS | PHARMACOLOGY & PHARMACY | REPLICATIVE FITNESS | Antiretroviral drugs | Disease transmission | HIV | Pharmacology | Human immunodeficiency virus | Drug resistance | Virology
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