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1. Full Text Power/sample size calculations for assessing correlates of risk in clinical efficacy trials
: P. B. GILBERT, H. E. JANES AND Y. HUANG
by Gilbert, Peter B and Janes, Holly E and Huang, Yunda
Statistics in Medicine, ISSN 0277-6715, 09/2016, Volume 35, Issue 21, pp. 3745 - 3759
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2. Full Text FCGR2C Polymorphisms Associated with HIV-1 Vaccine Protection Are Linked to Altered Gene Expression of Fc-[gamma] Receptors in Human B Cells
by Peng, Xinxia and Li, Shuying S and Gilbert, Peter B and Geraghty, Daniel E and Katze, Michael G
PLoS ONE, ISSN 1932-6203, 03/2016, Volume 11, Issue 3
AIDS vaccines | Single nucleotide polymorphisms | Research | B cells | Gene expression | Health aspects
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3. Full Text Estimating and Testing Vaccine Sieve Effects Using Machine Learning
by Benkeser, David and Gilbert, Peter B and Carone, Marco
Journal of the American Statistical Association, ISSN 0162-1459, 07/2019, Volume 114, Issue 527, pp. 1038 - 1049
When available, vaccines are an effective means of disease prevention. Unfortunately, efficacious vaccines have not yet been developed for several major... 
Targeted minimum loss-based estimation | HIV | Malaria | Machine learning | Competing risks | Vaccine | Dependent censoring | TRIALS | RISK | STATISTICS & PROBABILITY | INFERENCE | FAILURE | PREDICTION | Sieve analysis | Infectious diseases | Effectiveness | Vaccines | Statistical inference | Artificial intelligence | Disease control | Estimators
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4. Full Text Revisiting the Correlate of Reduced HIV Infection Risk in the Rv144 Vaccine Trial
by Zolla-Pazner, S and Gilbert, PB
JOURNAL OF VIROLOGY, ISSN 0022-538X, 09/2019, Volume 93, Issue 17
The RV144 vaccine trial is the only clinical study to have shown a modest but statistically significant decrease in HIV infection risk. RV144 and the... 
ACQUISITION | PREVENTION | ENVELOPE PROTEIN | PROTECTIVE EFFICACY | PHASE 2B | CHALLENGES | vaccine | DESIGN ISSUES | immune correlates | VIROLOGY | HIV | RECOMBINANT | EFFICACY TRIAL | V1V2 domain | antibodies
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5. Full Text Assessing pharmacokinetic marker correlates of outcome, with application to antibody prevention efficacy trials
by Gilbert, Peter B and Zhang, Yuanyuan and Rudnicki, Erika and Huang, Yunda
Statistics in Medicine, ISSN 0277-6715, 10/2019, Volume 38, Issue 23, pp. 4503 - 4518
The Antibody Mediated Prevention efficacy trials are the first studies to evaluate whether passive administration of a broadly neutralizing monoclonal antibody... 
clinical trial | measurement error | case‐control | interval censoring | case‐cohort | pharmacokinetics | longitudinal data | REGRESSION | MEDICINE, RESEARCH & EXPERIMENTAL | case-control | MEDICAL INFORMATICS | STATISTICS & PROBABILITY | PUBLIC, ENVIRONMENTAL & OCCUPATIONAL HEALTH | MODELS | MATHEMATICAL & COMPUTATIONAL BIOLOGY | DOUBLE-BLIND | case-cohort | HIV-1 VACCINE | Index Medicus
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6. Full Text Brief Report: Preventing HIV-1 Infection in Women Using Oral Preexposure Prophylaxis: A Meta-analysis of Current Evidence
by Hanscom, Brett and Janes, Holly E and Guarino, Peter D and Huang, Ying and Brown, Elizabeth R and Chen, Ying Qing and Hammer, Scott M and Gilbert, Peter B and Donnell, Deborah J
JAIDS Journal of Acquired Immune Deficiency Syndromes, ISSN 1525-4135, 12/2016, Volume 73, Issue 5, pp. 606 - 608
The World Health Organization has issued an early release revision to its antiretroviral guidelines in which PrEP (pre-exposure prophylaxis in the form of... 
pre-exposure prophylaxis | HIV prevention | PrEP | Truvada | tenofovir | HIV Infections - prevention & control | Medication Adherence | Pre-Exposure Prophylaxis - methods | Anti-Retroviral Agents - administration & dosage | Humans | Female | Treatment Outcome | Africa, Southern | Placebos - administration & dosage | Randomized Controlled Trials as Topic
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7. Full Text Statistical Learning Methods to Determine Immune Correlates of Herpes Zoster in Vaccine Efficacy Trials
by Gilbert, Peter B and Luedtke, Alexander R
The Journal of infectious diseases, ISSN 0022-1899, 09/2018, Volume 218, Issue 2, pp. S99 - S101
Using Super Learner, a machine learning statistical method, we assessed varicella zoster virus-specific glycoprotein-based enzyme-linked immunosorbent assay... 
INFECTIOUS DISEASES | ASSAY | PROTECTION | immune correlate of protection | systems vaccinology | MICROBIOLOGY | IMMUNOLOGY | machine learning | safety trial | Zostavax Efficacy | correlate of immunity | super learner | case-cohort study | Antibody titer | Supplement
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8. Full Text Inference on treatment effect modification by biomarker response in a three-phase sampling design
by Juraska, Michal and Huang, Ying and Gilbert, Peter B
Biostatistics (Oxford, England), ISSN 1465-4644, 12/2018
An objective in randomized clinical trials is the evaluation of "principal surrogates," which consists of analyzing how the treatment effect on a clinical... 
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9. Full Text HAI and NAI titer correlates of inactivated and live attenuated influenza vaccine efficacy
by Gilbert, Peter B and Fong, Youyi and Juraska, Michal and Carpp, Lindsay N and Monto, Arnold S and Martin, Emily T and Petrie, Joshua G
BMC Infectious Diseases, ISSN 1471-2334, 05/2019, Volume 19, Issue 1, pp. 453 - 12
Background: High hemagglutination inhibition (HAI) and neuraminidase inhibition (NAI) titers are generally associated with reduced influenza risk. While... 
Hemagglutinin inhibition (HAI) titers | FLUVACS trial | Neuraminidase inhibition (NAI) titer | Principal stratification/vaccine efficacy moderation framework | Immune correlates | Vaccine efficacy | DEFINITION | INHIBITION ANTIBODY-TITERS | IMMUNE-RESPONSE | INFECTIOUS DISEASES | PROTECTION | HEMAGGLUTININ | IMMUNIZATION | IMMUNOGENICITY | EVOLUTION | MODELS | VIRUS NEURAMINIDASE | Influenza vaccines | Composition | Demographic aspects | Patient outcomes | Influenza | Agglutination tests | Health aspects | Risk factors | Immunoglobulins | Statistical analysis | Effectiveness | Laboratories | Vaccination | Antibodies | Viruses | Infections | Vaccines | Hemagglutination inhibition | Hemagglutination | Surveillance | Correlation analysis | Exo-a-sialidase | Older people | Biomarkers | Seasons | Inhibition
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10. Full Text Analysis of generalized semiparametric mixed varying‐coefficients models for longitudinal data
by Sun, Yanqing and Qi, Li and Heng, Fei and Gilbert, Peter B
Canadian Journal of Statistics, ISSN 0319-5724, 09/2019, Volume 47, Issue 3, pp. 352 - 373
The generalized semiparametric mixed varying‐coefficient effects model for longitudinal data can accommodate a variety of link functions and flexibly model... 
Link function | local linear smoothing | varying‐coefficient effects | profile weighted least squares | testing covariate‐varying effects | REGRESSION | STATISTICS & PROBABILITY | testing covariate-varying effects | varying-coefficient effects | Highly active antiretroviral therapy | Antiviral agents | Medical research | Analysis | Medicine, Experimental | Models | Drug resistance | Economic models | Computer simulation | Asymptotic properties | Test procedures | Clinical trials | Exposure | Coefficients | Longitude | Domains | Time dependence | Smoothing | Mathematical models | Mutation | Estimators
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11. Full Text Generalized semiparametric varying-coefficient model for longitudinal data with applications to adaptive treatment randomizations
: Generalized Semiparametric Varying-Coefficient Model for Longitudinal Data
by Qi, Li and Sun, Yanqing and Gilbert, Peter B
Biometrics, ISSN 0006-341X, 06/2017, Volume 73, Issue 2, pp. 441 - 451
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12. Full Text Smoothed rank regression for the accelerated failure time competing risks model with missing cause of failure
by Qiu, Zhiping and Wan, Alan T.K and Zhou, Yong and Gilbert, Peter B
Statistica Sinica, ISSN 1017-0405, 2019, Volume 29, Issue 1, pp. 23 - 46
This paper examines the accelerated failure time competing risks model with missing cause of failure using the monotone class rank-based estimating equations... 
U-statistic | Missing at random | Inverse probability weighting | Rank-based estimator | Accelerated failure time model | Competing risks | Imputation | Monotone estimating equation | TESTS | EXTENSIONS | VACCINE | STATISTICS & PROBABILITY | STEP | INFERENCE | HAZARDS REGRESSION | SUBDISTRIBUTION | imputation | rank-based estimator | ESTIMATORS | competing risks | COEFFICIENTS | missing at random | inverse probability weighting | monotone estimating equation
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13. Full Text Comparing and combining biomarkers as principal surrogates for time‐to‐event clinical endpoints
by Gabriel, Erin E and Sachs, Michael C and Gilbert, Peter B
Statistics in Medicine, ISSN 0277-6715, 09/2017, Volume 36, Issue 21, pp. 3440 - 3440
MEDICINE, RESEARCH & EXPERIMENTAL | STATISTICS & PROBABILITY | PUBLIC, ENVIRONMENTAL & OCCUPATIONAL HEALTH | MEDICAL INFORMATICS | MATHEMATICAL & COMPUTATIONAL BIOLOGY
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14. Full Text Ongoing Vaccine and Monoclonal Antibody HIV Prevention Efficacy Trials and Considerations for Sequel Efficacy Trial Designs
by Gilbert, Peter B
Statistical Communications in Infectious Diseases, ISSN 1948-4690, 07/2019, Volume 11, Issue 1
Four randomized placebo-controlled efficacy trials of a candidate vaccine or passively infused monoclonal antibody for prevention of HIV-1 infection are... 
vaccine efficacy trial | clinical trial design | broadly neutralizing antibody | pre-exposure prophylaxis | HIV prevention
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15. Full Text Effect of centrally acting angiotensin converting enzyme inhibitor on the exercise-induced increases in muscle sympathetic nerve activity
: Angiotensin II and arterial baroreflex resetting during exercise
by Moralez, Gilbert and Jouett, Noah P and Tian, Jun and Zimmerman, Matthew C and Bhella, Paul and Raven, Peter B
The Journal of Physiology, ISSN 0022-3751, 06/2018, Volume 596, Issue 12, pp. 2315 - 2332
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16. Full Text Correction to: Comparing and combining biomarkers as principal surrogates for time-to-event clinical endpoints: Comparing and combining biomarkers as principal surrogates for time-to-event clinical endpoints (Statistics in Medicine, (2015), 34, 3, (381-395), 10.1002/sim.6349)
by Gabriel, Erin E and Sachs, Michael C and Gilbert, Peter B
Statistics in Medicine, ISSN 0277-6715, 09/2017, Volume 36, Issue 21, p. 3440
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17. Losartan reduces the immediate and sustained increases in muscle sympathetic nerve activity after hyperacute intermittent hypoxia
by Noah P Jouett and Gilbert Moralez and Peter B Raven and Michael L Smith
Journal of Applied Physiology, ISSN 8750-7587, 04/2017, Volume 122, Issue 4, p. 884
  Obstructive sleep apnea (OSA) is characterized by intermittent hypoxemia, which produces elevations in sympathetic nerve activity (SNA) and associated... 
Electrocardiography | Hypoxia | Sleep apnea | Blood pressure | Muscular system | Veins & arteries
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18. Losartan reduces the immediate and sustained increases in muscle sympathetic nerve activity after hyperacute intermittent hypoxia
by Jouett, Noah P and Moralez, Gilbert and Raven, Peter B and Smith, Michael L
Journal of Applied Physiology, ISSN 8750-7587, 04/2017, Volume 122, Issue 4, pp. 884 - 884
Obstructive sleep apnea (OSA) is characterized by intermittent hypoxemia, which produces elevations in sympathetic nerve activity (SNA) and associated... 
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