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Nature Methods, ISSN 1548-7091, 12/2016, Volume 13, Issue 12, pp. 1005 - 1008
Journal Article
Nature Genetics, ISSN 1061-4036, 07/2015, Volume 47, Issue 7, pp. 736 - +
Journal Article
Bioinformatics, ISSN 1367-4803, 12/2012, Volume 28, Issue 23, pp. 3051 - 3057
Journal Article
Bioinformatics, ISSN 1367-4803, 01/2019, Volume 35, Issue 1, pp. 20 - 27
Journal Article
Journal of Computational Biology, ISSN 1066-5277, 07/2018, Volume 25, Issue 7, pp. 825 - 836
The advent of high throughput sequencing (HTS) technologies raises a major concern about storage and transmission of data produced by these technologies. In... 
guided de Bruijn graph | high throughput sequencing | sequence compression | COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | BIOCHEMICAL RESEARCH METHODS | MATHEMATICAL & COMPUTATIONAL BIOLOGY | STATISTICS & PROBABILITY
Journal Article
Bioinformatics, ISSN 1367-4803, 09/2016, Volume 32, Issue 17, pp. i545 - i551
Motivation: Second generation sequencing technologies paved the way to an exceptional increase in the number of sequenced genomes, both prokaryotic and... 
ACCURATE | ASSEMBLIES | ALIGNMENT | TANDEM REPEATS | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | HYBRID ERROR-CORRECTION | DNA | BIOCHEMICAL RESEARCH METHODS | MATHEMATICAL & COMPUTATIONAL BIOLOGY | GENOME | NANOPORE | Sequence Alignment | Algorithms | Computational Biology | Programming Languages | Software | Genome | Sequence Analysis, DNA
Journal Article
GENOME MEDICINE, ISSN 1756-994X, 02/2019, Volume 11, Issue 1, pp. 8 - 12
Journal Article
Bioinformatics, ISSN 1367-4803, 06/2010, Volume 26, Issue 12, pp. i350 - i357
Recent years have witnessed an increase in research activity for the detection of structural variants (SVs) and their association to human disease. The advent... 
ELEMENTS | HUMAN GENOME | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | COPY NUMBER | BIOCHEMICAL RESEARCH METHODS | MATHEMATICAL & COMPUTATIONAL BIOLOGY | STRUCTURAL VARIATION | Algorithms | Genome | Genomics - methods | DNA Transposable Elements | Ismb 2010 Conference Proceedings July 11 to July 13, 2010, Boston, Ma, Usa
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 07/2014, Volume 42, Issue 1, pp. W494 - W500
High throughput sequencing (HTS) platforms generate unprecedented amounts of data that introduce challenges for processing and downstream analysis. While tools... 
BIOCHEMISTRY & MOLECULAR BIOLOGY | Sequence Alignment | Humans | Polymorphism, Single Nucleotide | Software | Internet | Genome, Human | High-Throughput Nucleotide Sequencing - methods
Journal Article
Bioinformatics, ISSN 1367-4803, 09/2018, Volume 34, Issue 17, pp. i706 - i714
Abstract Motivation Segmental duplications (SDs) or low-copy repeats, are segments of DNA > 1 Kbp with high sequence identity that are copied to other regions... 
DISTANCE | IMPACT | EVOLUTION | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | RECONSTRUCTION | SEQUENCE | BIOCHEMICAL RESEARCH METHODS | MATHEMATICAL & COMPUTATIONAL BIOLOGY | DIVERSITY | COPY-NUMBER VARIATION | Eccb 2018 | European Conference on Computational Biology Proceedings
Journal Article
GENOME RESEARCH, ISSN 1088-9051, 11/2019, Volume 29, Issue 11, pp. 1860 - 1877
Available computational methods for tumor phylogeny inference via single-cell sequencing (SCS) data typically aim to identify the most likely perfect phylogeny... 
DISTANCE | CLONALITY INFERENCE | MODEL | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | BIOCHEMISTRY & MOLECULAR BIOLOGY | GENETICS & HEREDITY | Computational Biology - methods | Neoplasms - genetics | Single-Cell Analysis - methods | Humans | Phylogeny | High-Throughput Nucleotide Sequencing - methods | Neoplasms - pathology | Method
Journal Article