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1. Full Text DNA double-strand break repair pathway regulates PD-L1 expression in cancer cells
by Sato, Hiro and Niimi, Atsuko and Yasuhara, Takaaki and Permata, Tiara Bunga Mayang and Hagiwara, Yoshihiko and Isono, Mayu and Nuryadi, Endang and Sekine, Ryota and Oike, Takahiro and Kakoti, Sangeeta and Yoshimoto, Yuya and Held, Kathryn D and Suzuki, Yoshiyuki and Kono, Koji and Miyagawa, Kiyoshi and Nakano, Takashi and Shibata, Atsushi
Nature Communications, ISSN 2041-1723, 12/2017, Volume 8, Issue 1, pp. 1751 - 11
Accumulating evidence suggests that exogenous cellular stress induces PD-L1 upregulation in cancer. A DNA double-strand break (DSB) is the most critical type... 
TUMOR-INFILTRATING LYMPHOCYTES | LUNG-CANCER | IMMUNE-SYSTEM | BRAF MUTATION | COLORECTAL-CANCER | MULTIDISCIPLINARY SCIENCES | NUCLEASE ACTIVITIES | NEOANTIGEN LOAD | HOMOLOGOUS RECOMBINATION | T-CELLS | ATR-DEPENDENT PHOSPHORYLATION | Neoplasms - metabolism | Ataxia Telangiectasia Mutated Proteins - metabolism | Humans | B7-H1 Antigen - genetics | DNA Breaks, Double-Stranded | Checkpoint Kinase 1 - metabolism | B7-H1 Antigen - metabolism | BRCA2 Protein - metabolism | Neoplasms - genetics | DNA Repair | Cell Line, Tumor | Ataxia Telangiectasia Mutated Proteins - genetics | BRCA2 Protein - genetics | Checkpoint Kinase 1 - genetics | DNA damage | Genotoxicity | Interferon regulatory factor 1 | Kinases | DNA repair | Signal transduction | Exonuclease | Ionizing radiation | Stat1 protein | Repair | Deoxyribonucleic acid--DNA | BRCA2 protein | CHK1 protein | Stat3 protein | Poly(ADP-ribose) polymerase | Breast cancer | siRNA | Double-strand break repair | Gene expression | Signaling | X rays | Depletion | PD-L1 protein | Genetic recombination | Cellular stress response | Cancer
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2. Full Text Correlation Between Prognosis and Morphological Abnormalities in Multiple Myeloma
by Iida, Shun and Ueda, Yoshihiko and Hagiwara, Shotaro
Blood, ISSN 0006-4971, 12/2016, Volume 128, Issue 22, pp. 5634 - 5634
Abstract Background Multiple myeloma shows various morphological abnormalities such as plasmablastic morphology, cytoplasmic granules, vacuolation, and nuclear... 
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3. Full Text Base excision repair regulates PD-L1 expression in cancer cells
by Permata, Tiara Bunga Mayang and Hagiwara, Yoshihiko and Sato, Hiro and Yasuhara, Takaaki and Oike, Takahiro and Gondhowiardjo, Soehartati and Held, Kathryn D and Nakano, Takashi and Shibata, Atsushi
Oncogene, ISSN 0950-9232, 02/2019, Volume 38, Issue 23, pp. 4452 - 4466
Programmed death-ligand 1 (PD-L1) is a key factor influencing cancer immunotherapy; however, the regulation of PD-L1 expression in cancer cells remains... 
Oxidative stress | Hydrogen peroxide | CHK1 protein | DNA damage | Genomes | DNA glycosylase | Microsatellite instability | Gene expression | Kinases | DNA repair | Base excision repair | Signal transduction | Immunotherapy | γ-Interferon | PD-L1 protein | Deoxyribonucleic acid--DNA | Cancer | Apoptosis | Tumors
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4. Full Text BRCA1 Directs the Repair Pathway to Homologous Recombination by Promoting 53BP1 Dephosphorylation
by Isono, Mayu and Niimi, Atsuko and Oike, Takahiro and Hagiwara, Yoshihiko and Sato, Hiro and Sekine, Ryota and Yoshida, Yukari and Isobe, Shin-Ya and Obuse, Chikashi and Nishi, Ryotaro and Petricci, Elena and Nakada, Shinichiro and Nakano, Takashi and Shibata, Atsushi
Cell Reports, ISSN 2211-1247, 01/2017, Volume 18, Issue 2, pp. 520 - 532
BRCA1 promotes homologous recombination (HR) by activating DNA-end resection. By contrast, 53BP1 forms a barrier that inhibits DNA-end resection. Here, we show... 
RIF1 | 53BP1 | ATM | DNA-end resection | PP4C | BRCA1 | NHEJ | CHOICE | RECRUITMENT | MAINTENANCE | DNA END RESECTION | STRAND BREAK REPAIR | REPLICATION | PP4 | NUCLEASE ACTIVITIES | IONIZING-RADIATION | CELL BIOLOGY | Phosphorylation | Ataxia Telangiectasia Mutated Proteins - metabolism | Signal Transduction | Humans | Phosphoprotein Phosphatases - metabolism | Homologous Recombination | Nuclear Proteins - metabolism | DNA Breaks, Double-Stranded | Carrier Proteins - metabolism | BRCA1 Protein - metabolism | DNA Repair | S Phase | DNA Repair Enzymes - metabolism | Exodeoxyribonucleases - metabolism | G2 Phase | MRE11 Homologue Protein - metabolism | Telomere-Binding Proteins - metabolism | Tumor Suppressor p53-Binding Protein 1 - metabolism
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5. Full Text Genetic basis of cardiomyopathy and the genotypes involved in prognosis and left ventricular reverse remodeling
by Tobita, Takashige and Nomura, Seitaro and Fujita, Takanori and Morita, Hiroyuki and Asano, Yoshihiro and Onoue, Kenji and Ito, Masamichi and Imai, Yasushi and Suzuki, Atsushi and Ko, Toshiyuki and Satoh, Masahiro and Fujita, Kanna and Naito, Atsuhiko T and Furutani, Yoshiyuki and Toko, Haruhiro and Harada, Mutsuo and Amiya, Eisuke and Hatano, Masaru and Takimoto, Eiki and Shiga, Tsuyoshi and Nakanishi, Toshio and Sakata, Yasushi and Ono, Minoru and Saito, Yoshihiko and Takashima, Seiji and Hagiwara, Nobuhisa and Aburatani, Hiroyuki and Komuro, Issei
Scientific Reports, ISSN 2045-2322, 12/2018, Volume 8, Issue 1, pp. 1998 - 11
Dilated cardiomyopathy (DCM) and hypertrophic cardiomyopathy (HCM) are genetically and phenotypically heterogeneous. Cardiac function is improved after... 
Cardiomyopathy, Dilated - genetics | Cardiomyopathy, Dilated - pathology | Cardiomyopathy, Hypertrophic - genetics | Cardiac Myosins - genetics | Humans | Middle Aged | Connectin - genetics | Myosin Heavy Chains - genetics | Male | Carrier Proteins - genetics | Ventricular Remodeling | Lamin Type A - genetics | Adult | Female | Aged | Polymorphism, Single Nucleotide | Mutation | Heart Ventricles - pathology | Cardiomyopathy, Hypertrophic - pathology | Heart | Prognosis | Dilated cardiomyopathy | Cardiomyopathy | Whites | Ventricle | Heart diseases | Genotypes
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6. Full Text Pre-exposure to ionizing radiation stimulates DNA double strand break end resection, promoting the use of homologous recombination repair
by Nakajima, Nakako Izumi and Hagiwara, Yoshihiko and Oike, Takahiro and Okayasu, Ryuichi and Murakami, Takeshi and Nakano, Takashi and Shibata, Atsushi
PLoS ONE, ISSN 1932-6203, 03/2015, Volume 10, Issue 3, p. e0122582
The choice of DNA double strand break (DSB) repair pathway is determined at the stage of DSB end resection. Resection was proposed to control the balance... 
PATHWAY CHOICE | HUMAN-LYMPHOCYTES | GAMMA-H2AX FOCI | MULTIDISCIPLINARY SCIENCES | G2 PHASE | CELL-CYCLE | ATM | ADAPTIVE RESPONSE | G/M CHECKPOINT ARREST | DAMAGE | REVEALS | Phosphorylation | Recombinational DNA Repair | Humans | Cell Line, Tumor | Homologous Recombination | DNA Damage | Radiation, Ionizing | Proteins | Ionizing radiation | DNA repair | Surgery | DNA | Post-transcription | Laboratories | DNA damage | Homologous recombination | G2 phase | Homology | Genomes | Kinases | Cancer therapies | Homologous recombination repair | Cell cycle | Fibroblasts | Repair | Deoxyribonucleic acid--DNA | Incubation | Replication protein A | Exposure | Protein A | Gene expression | Double-strand break repair | Non-homologous end joining | Kinetics | Deoxyribonucleic acid
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7. Full Text Clinical and pathological aspects of human immunodeficiency virus-associated plasmablastic lymphoma: analysis of 24 cases
by Koizumi, Yusuke and Uehira, Tomoko and Ota, Yasunori and Ogawa, Yoshihiko and Yajima, Keishiro and Tanuma, Junko and Yotsumoto, Mihoko and Hagiwara, Shotaro and Ikegaya, Satoshi and Watanabe, Dai and Minamiguchi, Hitoshi and Hodohara, Keiko and Murotani, Kenta and Mikamo, Hiroshige and Wada, Hideho and Ajisawa, Atsushi and Shirasaka, Takuma and Nagai, Hirokazu and Kodama, Yoshinori and Hishima, Tsunekazu and Mochizuki, Makoto and Katano, Harutaka and Okada, Seiji
International Journal of Hematology, ISSN 0925-5710, 12/2016, Volume 104, Issue 6, pp. 669 - 681
Plasmablastic lymphoma (PBL) is a rare AIDS-related malignancy with a poor prognosis. Little is known about this entity, and no standard treatment regimen has... 
CD4 | Medicine & Public Health | Hematology | Combination antiretroviral therapy | Acquired immunodeficiency syndrome | Oncology | Plasmablastic lymphoma | Human immunodeficiency virus | Epstein–Barr virus | ORAL-CAVITY | AIDS | BORTEZOMIB | COMBINATION | CANCER | CHEMOTHERAPY | HIV | EPOCH | Epstein-Barr virus | PATIENT | HEMATOLOGY | Doxorubicin - therapeutic use | Lymphoma, AIDS-Related - therapy | Prognosis | Humans | Lymphoma, AIDS-Related - pathology | Middle Aged | Male | Cyclophosphamide - therapeutic use | Plasmablastic Lymphoma - pathology | Lymphoma, AIDS-Related - diagnosis | Young Adult | Herpesvirus 4, Human - isolation & purification | Adult | Female | Plasmablastic Lymphoma - diagnosis | Lymphoma, AIDS-Related - virology | Anti-Retroviral Agents - therapeutic use | Hematopoietic Stem Cell Transplantation | Treatment Outcome | CD4 Lymphocyte Count | HIV - isolation & purification | Antineoplastic Combined Chemotherapy Protocols - therapeutic use | Survival Analysis | Vincristine - therapeutic use | Epstein-Barr Virus Infections - complications | Plasmablastic Lymphoma - therapy | Plasmablastic Lymphoma - virology | Prednisone - therapeutic use | Highly active antiretroviral therapy | Transplantation | Lymphomas | Hematopoietic stem cells
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8. Full Text Human Rad52 Promotes XPG-Mediated R-loop Processing to Initiate Transcription-Associated Homologous Recombination Repair
by Yasuhara, Takaaki and Kato, Reona and Hagiwara, Yoshihiko and Shiotani, Bunsyo and Yamauchi, Motohiro and Nakada, Shinichiro and Shibata, Atsushi and Miyagawa, Kiyoshi
Cell, ISSN 0092-8674, 10/2018, Volume 175, Issue 2, pp. 558 - 570.e11
Given that genomic DNA exerts its function by being transcribed, it is critical for the maintenance of homeostasis that DNA damage, such as double-strand... 
Rad52 | transcription-associated homologous recombination repair | non-homologous end-joining | R-loop | DNA-RNA hybrid | genomic instability | DNA double-strand break | XPG | PATHWAY CHOICE | STRAND BREAK REPAIR | REPLICATION FORKS | LANDSCAPE | DNA-DAMAGE RESPONSE | HUMAN-CELLS | BIOCHEMISTRY & MOLECULAR BIOLOGY | ATM | GENOME STABILITY | BRCA1 | NUCLEOTIDE EXCISION-REPAIR | CELL BIOLOGY | Cell Line | DNA-Binding Proteins - physiology | Transcription Factors - physiology | Humans | Homologous Recombination | Nuclear Proteins - metabolism | Endonucleases - metabolism | DNA Breaks, Double-Stranded | Rad52 DNA Repair and Recombination Protein - genetics | RNA - genetics | DNA - genetics | DNA-Binding Proteins - metabolism | Transcription Factors - metabolism | Rad52 DNA Repair and Recombination Protein - metabolism | DNA End-Joining Repair | DNA Repair | Recombinational DNA Repair - physiology | Nuclear Proteins - physiology | DNA Damage | Nuclear Proteins - genetics | Endonucleases - physiology | Biotechnology | Medical colleges | RNA | DNA damage | Genes | Genetic transcription | DNA repair | Cells
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9. Full Text Wisteria floribunda agglutinin and its reactive-glycan-carrying prostate-specific antigen as a novel diagnostic and prognostic marker of prostate cancer
by Hagiwara, Kazuhisa and Tobisawa, Yuki and Kaya, Takatoshi and Kaneko, Tomonori and Hatakeyama, Shingo and Mori, Kazuyuki and Hashimoto, Yasuhiro and Koie, Takuya and Suda, Yoshihiko and Ohyama, Chikara and Yoneyama, Tohru
International Journal of Molecular Sciences, ISSN 1661-6596, 02/2017, Volume 18, Issue 2, pp. 261 - 261
Wisteria floribunda agglutinin (WFA) preferably binds to LacdiNAc glycans, and its reactivity is associated with tumor progression. The aim of this study to... 
Wisteria floribunda agglutinin (WFA) lectin | Biomarker | LacdiNAc | N-glycan | Prostate-specific antigen | BIOCHEMISTRY & MOLECULAR BIOLOGY | FUCOSYLATED HAPTOGLOBIN | RADICAL PROSTATECTOMY | OVARIAN-CANCER | biomarker | HUMAN BREAST-CANCER | CHEMISTRY, MULTIDISCIPLINARY | GLYCOBIOMARKER | ACTIVE SURVEILLANCE | RECURRENCE | CARCINOMA | EXPRESSION | prostate-specific antigen | Immunohistochemistry | Multivariate Analysis | Prostatic Hyperplasia - pathology | Prognosis | Area Under Curve | Humans | Middle Aged | Male | Prostate - surgery | Prostatic Neoplasms - diagnosis | Receptors, N-Acetylglucosamine - metabolism | Neoplasm Recurrence, Local - pathology | Prostate - pathology | Neoplasm Grading | Aged, 80 and over | Prostatic Neoplasms - blood | Adult | Prostate-Specific Antigen - metabolism | Prostatic Neoplasms - pathology | Prostatic Neoplasms - surgery | Risk Factors | Glycosylation | Prostate-Specific Antigen - blood | Polysaccharides - metabolism | Biomarkers, Tumor - blood | Biopsy | Prostatectomy | Prostatic Hyperplasia - blood | ROC Curve | Aged | Plant Lectins - metabolism | Antigens | Immunoassay | Hyperplasia | Benign | Hazards | Regression analysis | Multivariate analysis | Patients | Glycan | Polysaccharides | Reactivity | Quality | Biomarkers | Diagnostic systems | Tomatoes | Prostate | Prostate cancer | Cancer
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10. Full Text Upper critical fields of the 11-system iron-chalcogenide superconductor FeSeo.25Teo.75
by Kida, Takanori and Matsunaga, Takahiro and Hagiwara, Masayuki and Mizuguchi, Yoshikazu and Takano, Yoshihiko and Klndo, Koichi
Journal of the Physical Society of Japan, ISSN 0031-9015, 11/2009, Volume 78, Issue 11
FeSe | Upper critical field | Magnetoresistance | Iron-based superconductor
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11. Full Text Mitotic catastrophe is a putative mechanism underlying the weak correlation between sensitivity to carbon ions and cisplatin
by Kobayashi, Daijiro and Oike, Takahiro and Shibata, Atsushi and Niimi, Atsuko and Kubota, Yoshiki and Sakai, Makoto and Amornwhichet, Napapat and Yoshimoto, Yuya and Hagiwara, Yoshihiko and Kimura, Yuka and Hirota, Yuka and Sato, Hiro and Isono, Mayu and Yoshida, Yukari and Kohno, Takashi and Ohno, Tatsuya and Nakano, Takashi
Scientific Reports, ISSN 2045-2322, 01/2017, Volume 7, Issue 1, p. 40588
In cancer therapy today, carbon ion radiotherapy is used mainly as monotherapy, whereas cisplatin is used concomitantly with X-ray radiotherapy. The... 
LUNG-CANCER | IN-VITRO | MULTIDISCIPLINARY SCIENCES | CERVICAL-CARCINOMA | TUMOR-CELLS | RADIOTHERAPY | REPLICATION STRESS | RADIATION | GLIOBLASTOMA CELLS | CHEMOTHERAPY | CANCER CELL-LINES | Mitosis - drug effects | Mitosis - radiation effects | Heavy Ion Radiotherapy | Apoptosis - drug effects | Apoptosis - radiation effects | X-Rays | Humans | Cell Line, Tumor | Clone Cells | Cisplatin - pharmacology | Ionizing radiation | Senescence | X rays | Cell death | Ions | Tumor cell lines | 4',6-Diamidino-2-phenylindole | Radiation therapy | Carbon | Cisplatin | Apoptosis | Cancer
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12. Full Text Heart Rate Control With If Inhibitor, Ivabradine, in Japanese Patients With Chronic Heart Failure　– A Randomized, Double-Blind, Placebo-Controlled Phase II Study
by Tsutsui, Hiroyuki and Momomura, Shinichi and Yamashina, Akira and Ogawa, Hisao and Shimokawa, Hiroaki and Kihara, Yasuki and Saito, Yoshihiko and Hagiwara, Nobuhisa and Ito, Hiroshi and Ako, Junya and Inomata, Takayuki and Tanaka, Takashi and Kawasaki, Yasushi and Study Investigators and study investigators and on behalf of the study investigators
Circulation Journal, ISSN 1346-9843, 2016, Volume 80, Issue 3, pp. 668 - 676
Background:Elevated heart rate (HR) is an independent risk factor for cardiovascular outcomes in various cardiac diseases, including heart failure (HF).Methods... 
Resting heart rate | Chronic heart failure | If inhibitor | Double-blind placebo-controlled trial | Left ventricular ejection fraction | inhibitor | RATE REDUCTION | CARDIAC & CARDIOVASCULAR SYSTEMS | MANAGEMENT | EFFICACY | SAFETY | CARVEDILOL | DISEASE | OUTCOMES | LIFE | Dose-Response Relationship, Drug | Heart Rate - drug effects | Double-Blind Method | Humans | Middle Aged | Heart Failure - physiopathology | Female | Male | Aged | Benzazepines - pharmacology | Chronic Disease | Heart Failure - drug therapy
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13. Full Text Enhancer of zeste homolog 2 is a novel prognostic biomarker in nonsmall cell lung cancer
by Huqun and Ishikawa, Rinako and Zhang, Jialing and Miyazawa, Hitoshi and Goto, Yoshiya and Shimizu, Yoshihiko and Hagiwara, Koichi and Koyama, Nobuyuki
Cancer, ISSN 0008-543X, 03/2012, Volume 118, Issue 6, pp. 1599 - 1606
BACKGROUND: Enhancer of zeste homolog 2 (EZH2) epigenetically silences many genes through the trimethylation of histone H3 lysine 27 and is implicated in tumor... 
tumor size | prognostic biomarker | tumor progression | nonsmall cell lung cancer | tumor invasion | EZH2 | HISTONE METHYLTRANSFERASE ACTIVITY | PROMOTER HYPERMETHYLATION | DEVELOPMENTAL REGULATORS | DNA METHYLATION | E-CADHERIN | SOMATIC MUTATIONS | BREAST-CANCER | ONCOLOGY | EMBRYONIC STEM-CELLS | PROSTATE-CANCER | GROUP PROTEIN EZH2 | Carcinoma, Non-Small-Cell Lung - pathology | Immunohistochemistry | DNA-Binding Proteins - physiology | Transcription Factors - physiology | Carcinoma, Non-Small-Cell Lung - chemistry | Prognosis | Lung Neoplasms - chemistry | Biomarkers, Tumor - analysis | Neoplasm Invasiveness | Humans | Middle Aged | Proportional Hazards Models | RNA, Messenger - analysis | DNA-Binding Proteins - analysis | Lung Neoplasms - pathology | Male | Transcription Factors - genetics | DNA-Binding Proteins - genetics | Enhancer of Zeste Homolog 2 Protein | Polycomb Repressive Complex 2 | Cell Line, Tumor | Female | Aged | Transcription Factors - analysis | Research | Biological markers | Lung cancer, Non-small cell
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14. Full Text MO1-16-2Update on phase II trial of cetuximab plus S-1/oxaliplatin (SOX) for metastatic colorectal cancer (mCRC): JACCRO CC-06
by Sunakawa, Yu and Ichikawa, Wataru and Hagiwara, Ken and Tsuda, Masahiro and Takagane, Akinori and Yasui, Hisateru and Satake, Hironaga and Denda, Tadamichi and Segawa, Yoshihiko and Tanioka, Hiroaki and Kotaka, Masahito and Kochi, Mitsugu and Watanabe, Takanori and Nakamura, Masato and Tsuji, Akihito and Tani, Satoshi and Negoro, Yuji and Tobimatsu, Kazutoshi and Takeuchi, Masahiro and Fujii, Masashi
Annals of Oncology, ISSN 0923-7534, 10/2019, Volume 30, Issue Supplement_6
Abstract Background We have determined the recommended dose of weekly cetuximab (cet) plus SOX (oxaliplatin 130mg/m2 on day 1 and S-1 40 mg/m2 twice daily on... 
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15. Full Text Weak superconducting fluctuations and small anisotropy of the upper critical fields in an Fe1:05Te0:85Se0:15 single crystal
by Kida, Takanori and Kotani, Masahiro and Mizuguchi, Yoshikazu and Takano, Yoshihiko and Hagiwara, Masayuki
Journal of the Physical Society of Japan, ISSN 0031-9015, 07/2010, Volume 79, Issue 7
Superconducting fluctuations | Upper critical field | Te,Se | Anisotropy | Iron-based superconductor
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