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by Imanishi, Tadashi and Itoh, Takeshi and Suzuki, Yutaka and O'Donovan, Claire and Fukuchi, Satoshi and Koyanagi, Kanako O and Barrero, Roberto A and Tamura, Takuro and Yamaguchi-Kabata, Yumi and Tanino, Motohiko and Yura, Kei and Miyazaki, Satoru and Ikeo, Kazuho and Homma, Keiichi and Kasprzyk, Arek and Nishikawa, Tetsuo and Hirakawa, Mika and Thierry-Mieg, Jean and Thierry-Mieg, Danielle and Ashurst, Jennifer and Jia, Libin and Nakao, Mitsuteru and Thomas, Michael A and Mulder, Nicola and Karavidopoulou, Youla and Jin, Lihua and Kim, Sangsoo and Yasuda, Tomohiro and Lenhard, Boris and Eveno, Eric and Suzuki, Yoshiyuki and Yamasaki, Chisato and Takeda, Jun-Ichi and Gough, Craig and Hilton, Phillip and Fujii, Yasuyuki and Sakai, Hiroaki and Tanaka, Susumu and Amid, Clara and Bellgard, Matthew and de Fatima Bonaldo, Maria and Bono, Hidemasa and Bromberg, Susan K and Brookes, Anthony J and Bruford, Elspeth and Carninci, Piero and Chelala, Claude and Couillault, Christine and de Souza, Sandro J and Debily, Marie-Anne and Devignes, Marie-Dominique and Dubchak, Inna and Endo, Toshinori and Estreicher, Anne and Eyras, Eduardo and Fukami-Kobayashi, Kaoru and Gopinath, Gopal R and Graudens, Esther and Hahn, Yoonsoo and Han, Michael and Han, Ze-Guang and Hanada, Kousuke and Hanaoka, Hideki and Harada, Erimi and Hashimoto, Katsuyuki and Hinz, Ursula and Hirai, Momoki and Hishiki, Teruyoshi and Hopkinson, Ian and Imbeaud, Sandrine and Inoko, Hidetoshi and Kanapin, Alexander and Kaneko, Yayoi and Kasukawa, Takeya and Kelso, Janet and Kersey, Paul and Kikuno, Reiko and Kimura, Kouichi and Korn, Bernhard and Kuryshev, Vladimir and Makalowska, Izabela and Makino, Takashi and Mano, Shuhei and Mariage-Samson, Regine and Mashima, Jun and Matsuda, Hideo and Mewes, Hans-Werner and Minoshima, Shinsei and Nagai, Keiichi and Nagasaki, Hideki and Nagata, Naoki and Nigam, Rajni and Ogasawara, Osamu and Ohara, Osamu and Ohtsubo, Masafumi and Okada, Norihiro and Okido, Toshihisa and Oota, Satoshi and Ota, Motonori and Ota, Toshio and ... and Tidigare Institutioner (före 2005) and KTH and Bioteknologi
PLoS Biology, ISSN 1544-9173, 2004, Volume 2, Issue 6, pp. 856 - 875
The human genome sequence defines our inherent biological potential; the realization of the biology encoded therein requires knowledge of the function of each... 
MESSENGER-RNAS | COMPLETE GENOME SEQUENCE | LARGE PROTEINS | DROSOPHILA-MELANOGASTER | UNTRANSLATED REGIONS | BIOCHEMISTRY & MOLECULAR BIOLOGY | BIOLOGY | SUBCELLULAR-LOCALIZATION | FUNCTIONAL ANNOTATION | EXPRESSED SEQUENCE TAGS | HUNTINGTONS-DISEASE | SINGLE NUCLEOTIDE POLYMORPHISMS | Protein Structure, Tertiary | Computational Biology - methods | Alternative Splicing - genetics | Humans | DNA, Complementary - genetics | Databases, Genetic | Genes - genetics | Open Reading Frames - genetics | Microsatellite Repeats - genetics | Polymorphism, Genetic | Genes - physiology | Polymorphism, Single Nucleotide | Internet | Genome, Human | Proteins | Genomics | Genetics | Biology | Genomes | Gene expression | Polymorphism | Gens | ADN | Computer Science | Other | Gene Therapy | Bioinformatics | Homo (Human) | Computational Biology | human genetics | RNA | Alternative Splicing | single nucleotide polymorphism | structure analysis | gene location | gene deletion | protein structure | genetic transcription | genome analysis | protein | gene mapping | Biochemistry and Molecular Biology | Microsatellite Repeats | Biological Sciences | biology | gene insertion | gene | Tertiary | physiology | article | RNA analysis | Naturvetenskap | genetic analysis | qualitative analysis | prediction | metabolism | genetic polymorphism | Genes | Open Reading Frames | alternative RNA splicing | reliability | Genetic | gene identification | international cooperation | open reading frame | genetic database | protein tertiary structure | Single Nucleotide | Complementary | data base | complementary DNA | cellular distribution | genetics | Databases | insertion sequences | sequence analysis | Natural Sciences | human | gene structure | phenotype | validation process | gene cassette | gene sequence | gene function | genetic variability | gene locus | nucleotide sequence | genome | controlled study | Biokemi och molekylärbiologi | Biologiska vetenskaper | DNA | organization | molecular cloning | microsatellite DNA | methodology
Journal Article
by Tanaka, Tsuyoshi and Antonio, Baltazar A and Kikuchi, Shoshi and Matsumoto, Takashi and Nagamura, Yoshiaki and Numa, Hisataka and Sakai, Hiroaki and Wu, Jianzhong and Itoh, Takeshi and Sasaki, Takuji and Aono, Ryo and Fujii, Yasuyuki and Habara, Takuya and Harada, Erimi and Kanno, Masako and Kawahara, Yoshihiro and Kawashima, Hiroaki and Kubooka, Hiromi and Matsuya, Akihiro and Nakaoka, Hajime and Saichi, Naomi and Sanbonmatsu, Ryoko and Sato, Yoshiharu and Shinso, Yuji and Suzuki, Mami and Takeda, Junichi and Tanino, Motohiko and Todokoro, Fusano and Yamaguchi, Kaori and Yamamoto, Naoyuki and Yamasaki, Chisato and Imanishi, Tadashi and Okido, Toshihisa and Tada, Masahito and Ikeo, Kazuho and Tateno, Yoshio and Gojobori, Takashi and Lin, Yao-Cheng and Wei, Fu-Jin and Hsing, Yueie and Zhao, Qiang and Han, Bin and Kramer, Melissa R and McCombie, Richard W and Lonsdale, David and O’donovan, Claire C and Whitfield, Eleanor J and Apweiler, Rolf and Koyanagi, Kanako O and Khurana, Jitendra P and Raghuvanshi, Saurabh and Singh, Nagendra K and Tyagi, Akhilesh K and Haberer, Georg and Fujisawa, Masaki and Hosokawa, Satomi and Ito, Yukiyo and Ikawa, Hiroshi and Shibata, Michie and Yamamoto, Mayu and Bruskiewich, Richard M and Hoen, Douglas R and Bureau, Thomas E and Namiki, Nobukazu and Ohyanagi, Hajime and Sakai, Yasumichi and Nobushima, Satoshi and Sakata, Katsumi and Barrero, Roberto A and Sato, Yutaka and Souvorov, Alexandre and Smith-White, Brian and Tatusova, Tatiana and An, Suyoung and An, Gynheung and Oota, Satoshi and Fuks, Galina and Messing, Joachim and Christie, Karen R and Lieberherr, Damien and Kim, Hyeran and Zuccolo, Andrea and Wing, Rod A and Nobuta, Kan and Green, Pamela J and Lu, Cheng and Meyers, Blake C and Chaparro, Cristian and Piegu, Benoit and Panaud, Olivier and Echeverria, Manuel and Rice Annotation Project
Nucleic Acids Research, ISSN 0305-1048, 1/2008, Volume 36, Issue suppl_1, pp. D1028 - D1033
Journal Article
by Itoh, Takeshi and Tanaka, Tsuyoshi and Barrero, Roberto A and Yamasaki, Chisato and Fujii, Yasuyuki and Hilton, Phillip B and Antonio, Baltazar A and Aono, Hideo and Apweiler, Rolf and Bruskiewich, Richard and Bureau, Thomas and Burr, Frances and De Oliveira, Antonio Costa and Fuks, Galina and Habara, Takuya and Haberer, Georg and Han, Bin and Harada, Erimi and Hiraki, Aiko T and Hirochika, Hirohiko and Hoen, Douglas and Hokari, Hiroki and Hosokawa, Satomi and Hsing, Yue-Ie and Ikawa, Hiroshi and Ikeo, Kazuho and Imanishi, Tadashi and Ito, Yukiyo and Jaiswal, Pankaj and Kanno, Masako and Kawahara, Yoshihiro and Kawamura, Toshiyuki and Kawashima, Hiroaki and Khurana, Jitendra P and Kikuchi, Shoshi and Komatsu, Setsuko and Koyanagi, Kanako O and Kubooka, Hiromi and Lieberherr, Damien and Lin, Yao-Cheng and Lonsdale, David and Matsumoto, Takashi and Matsuya, Akihiro and McCombie, W. Richard and Messing, Joachim and Miyao, Akio and Mulder, Nicola and Nagamura, Yoshiaki and Nam, Jongmin and Namiki, Nobukazu and Numa, Hisataka and Nurimoto, Shin and O'Donovan, Claire and Ohyanagi, Hajime and Okido, Toshihisa and OOta, Satoshi and Osato, Naoki and Palmer, Lance E and Quetier, Francis and Raghuvanshi, Saurabh and Saichi, Naomi and Sakai, Hiroaki and Sakai, Yasumichi and Sakata, Katsumi and Sakurai, Tetsuya and Sato, Fumihiko and Sato, Yoshiharu and Schoof, Heiko and Seki, Motoaki and Shibata, Michie and Shimizu, Yuji and Shinozaki, Kazuo and Shinso, Yuji and Singh, Nagendra K and Smith-White, Brian and Takeda, Jun-Ichi and Tanino, Motohiko and Tatusova, Tatiana and Thongjuea, Supat and Todokoro, Fusano and Tsugane, Mika and Tyagi, Akhilesh K and Vanavichit, Apichart and Wang, Aihui and Wing, Rod A and Yamaguchi, Kaori and Yamamoto, Mayu and Yamamoto, Naoyuki and Yu, Yeisoo and Zhang, Hao and Zhao, Qiang and Higo, Kenichi and Burr, Benjamin and Gojobori, Takashi and Sasaki, Takuji
Genome Research, ISSN 1088-9051, 02/2007, Volume 17, Issue 2, pp. 175 - 183
We present here the annotation of the complete genome of rice Oryza sativa L. ssp. japonica cultivar Nipponbare. All functional annotations for proteins and... 
DRAFT SEQUENCE | GENE NUMBER | NONCODING RNAS | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | BIOCHEMISTRY & MOLECULAR BIOLOGY | GENETICS & HEREDITY | HYBRIDIZATION | CDNA-CLONES | CODON USAGE | IDENTIFICATION | EXPRESSION | INTERPROSCAN | Arabidopsis thaliana | Genetic aspects | RNA | Analysis | Rice
Journal Article
Plant & Cell Physiology, ISSN 0032-0781, 01/2011, Volume 52, Issue 2, pp. 254 - 264
Recent advances in technologies for observing high-resolution genomic activities, such as whole-genome tiling arrays and high-throughput sequencers, provide... 
Journal Article
by Yamasaki, Chisato and Murakami, Katsuhiko and Fujii, Yasuyuki and Sato, Yoshiharu and Harada, Erimi and Takeda, Jun-Ichi and Taniya, Takayuki and Sakate, Ryuichi and Kikugawa, Shingo and Shimada, Makoto and Tanino, Motohiko and Koyanagi, Kanako O and Barrero, Roberto A and Gough, Craig and Chun, Hong-Woo and Habara, Takuya and Hanaoka, Hideki and Hayakawa, Yosuke and Hilton, Phillip B and Kaneko, Yayoi and Kanno, Masako and Kawahara, Yoshihiro and Kawamura, Toshiyuki and Matsuya, Akihiro and Nagata, Naoki and Nishikata, Kensaku and Noda, Akiko Ogura and Nurimoto, Shin and Saichi, Naomi and Sakai, Hiroaki and Sanbonmatsu, Ryoko and Shiba, Rie and Suzuki, Mami and Takabayashi, Kazuhiko and Takahashi, Aiko and Tamura, Takuro and Tanaka, Masayuki and Tanaka, Susumu and Todokoro, Fusano and Yamaguchi, Kaori and Yamamoto, Naoyuki and Okido, Toshihisa and Mashima, Jun and Hashizume, Aki and Jin, Lihua and Lee, Kyung-Bum and Lin, Yi-Chueh and Nozaki, Asami and Sakai, Katsunaga and Tada, Masahito and Miyazaki, Satoru and Makino, Takashi and Ohyanagi, Hajime and Osato, Naoki and Tanaka, Nobuhiko and Suzuki, Yoshiyuki and Ikeo, Kazuho and Saitou, Naruya and Sugawara, Hideaki and O'Donovan, Claire and Kulikova, Tamara and Whitfield, Eleanor and Halligan, Brian and Shimoyama, Mary and Twigger, Simon and Yura, Kei and Kimura, Kouichi and Yasuda, Tomohiro and Nishikawa, Tetsuo and Akiyama, Yutaka and Motono, Chie and Mukai, Yuri and Nagasaki, Hideki and Suwa, Makiko and Horton, Paul and Kikuno, Reiko and Ohara, Osamu and Lancet, Doron and Eveno, Eric and Graudens, Esther and Imbeaud, Sandrine and Debily, Marie Anne and Hayashizaki, Yoshihide and Amid, Clara and Han, Michael and Osanger, Andreas and Endo, Toshinori and Thomas, Michael A and Hirakawa, Mika and Makalowski, Wojciech and Nakao, Mitsuteru and Kim, Nam-Soon and Yoo, Hyang-Sook and De Souza, Sandro J and De Fatima Bonaldo, Maria and Niimura, Yoshihito and Kuryshev, Vladimir and Schupp, Ingo and Wiemann, Stefan and Bellgard, Matthew and ... and Genome Information Integration Project And H-Invitational 2
Nucleic Acids Research, ISSN 0305-1048, 1/2008, Volume 36, Issue suppl_1, pp. D793 - D799
Here we report the new features and improvements in our latest release of the H-Invitational Database (H-InvDB; http://www.h-invitational.jp/), a comprehensive... 
PROTEINS | BIOCHEMISTRY & MOLECULAR BIOLOGY | GENOMIC DNA | SEQUENCE | PREDICTION | User-Computer Interface | Genes | Humans | RNA, Messenger - genetics | Databases, Genetic | Chromosome Mapping | Proteins - genetics | Animals | Proteins - metabolism | RNA, Messenger - chemistry | DNA, Complementary - chemistry | Internet | Proteins - chemistry | Life Sciences
Journal Article
by Itoh, Takeshi and Tanaka, Tsuyoshi and Barrero, Roberto A and Yamasaki, Chisato and Fujii, Yasuyuki and Hilton, Phillip B and Antonio, Baltazar A and Aono, Hideo and Apweiler, Rolf and Bruskiewich, Richard and Bureau, Thomas and Burr, Frances and Costa de Oliveira, Antonio and Fuks, Galina and Habara, Takuya and Haberer, Georg and Han, Bin and Harada, Erimi and Hiraki, Aiko T and Hirochika, Hirohiko and Hoen, Douglas and Hokari, Hiroki and Hosokawa, Satomi and Hsing, Yue and Ikawa, Hiroshi and Ikeo, Kazuho and Imanishi, Tadashi and Ito, Yukiyo and Jaiswal, Pankaj and Kanno, Masako and Kawahara, Yoshihiro and Kawamura, Toshiyuki and Kawashima, Hiroaki and Khurana, Jitendra P and Kikuchi, Shoshi and Komatsu, Setsuko and Koyanagi, Kanako O and Kubooka, Hiromi and Lieberherr, Damien and Lin, Yao-Cheng and Lonsdale, David and Matsumoto, Takashi and Matsuya, Akihiro and McCombie, WRichard and Messing, Joachim and Miyao, Akio and Mulder, Nicola and Nagamura, Yoshiaki and Nam, Jongmin and Namiki, Nobukazu and Numa, Hisataka and Nurimoto, Shin and O'Donovan, Claire and Ohyanagi, Hajime and Okido, Toshihisa and OOta, Satoshi and Osato, Naoki and Palmer, Lance E and Quetier, Francis and Raghuvanshi, Saurabh and Saichi, Naomi and Sakai, Hiroaki and Sakai, Yasumichi and Sakata, Katsumi and Sakurai, Tetsuya and Sato, Fumihiko and Sato, Yoshiharu and Schoof, Heiko and Seki, Motoaki and Shibata, Michie and Shimizu, Yuji and Shinozaki, Kazuo and Shinso, Yuji and Singh, Nagendra K and Smith-White, Brian and Takeda, Jun-ichi and Tanino, Motohiko and Tatusova, Tatiana and Thongjuea, Supat and Todokoro, Fusano and Tsugane, Mika and Tyagi, Akhilesh K and Vanavichit, Apichart and Wang, Aihui and Wing, Rod A and Yamaguchi, Kaori and Yamamoto, Mayu and Yamamoto, Naoyuki and Yu, Yeisoo and Zhang, Hao and Zhao, Qiang and Higo, Kenichi and Burr, Benjamin
Genome Research, ISSN 1088-9051, 02/2007, Volume 17, Issue 2, pp. 175 - 183
We present here the annotation of the complete genome of rice Oryza sativa L. ssp. japonica cultivar Nipponbare. All functional annotations for proteins and... 
Journal Article
by Itoh, Takeshi and Tanaka, Tsuyoshi and Barrero, Roberto A and Yamasaki, Chisato and Fujii, Yasuyuki and Hilton, Phillip B and Antonio, Baltazar A and Aono, Hideo and Apweiler, Rolf and Bruskiewich, Richard and Bureau, Thomas and Burr, Frances and Costa de Oliveira, Antonio and Fuks, Galina and Habara, Takuya and Haberer, Georg and Han, Bin and Harada, Erimi and Hiraki, Aiko T and Hirochika, Hirohiko and Hoen, Douglas and Hokari, Hiroki and Hosokawa, Satomi and Hsing, Yue-ie and Ikawa, Hiroshi and Ikeo, Kazuho and Imanishi, Tadashi and Ito, Yukiyo and Jaiswal, Pankaj and Kanno, Masako and Kawahara, Yoshihiro and Kawamura, Toshiyuki and Kawashima, Hiroaki and Khurana, Jitendra P and Kikuchi, Shoshi and Komatsu, Setsuko and Koyanagi, Kanako O and Kubooka, Hiromi and Lieberherr, Damien and Lin, Yao-Cheng and Lonsdale, David and Matsumoto, Takashi and Matsuya, Akihiro and McCombie, W Richard and Messing, Joachim and Miyao, Akio and Mulder, Nicola and Nagamura, Yoshiaki and Nam, Jongmin and Namiki, Nobukazu and Numa, Hisataka and Nurimoto, Shin and O'Donovan, Claire and Ohyanagi, Hajime and Okido, Toshihisa and Oota, Satoshi and Osato, Naoki and Palmer, Lance E and Quetier, Francis and Raghuvanshi, Saurabh and Saichi, Naomi and Sakai, Hiroaki and Sakai, Yasumichi and Sakata, Katsumi and Sakurai, Tetsuya and Sato, Fumihiko and Sato, Yoshiharu and Schoof, Heiko and Seki, Motoaki and Shibata, Michie and Shimizu, Yuji and Shinozaki, Kazuo and Shinso, Yuji and Singh, Nagendra K and Smith-White, Brian and Takeda, Jun-ichi and Tanino, Motohiko and Tatusova, Tatiana and Thongjuea, Supat and Todokoro, Fusano and Tsugane, Mika and Tyagi, Akhilesh K and Vanavichit, Apichart and Wang, Aihui and Wing, Rod A and Yamaguchi, Kaori and Yamamoto, Mayu and Yamamoto, Naoyuki and Yu, Yeisoo and Zhang, Hao and Zhao, Qiang and Higo, Kenichi and Burr, Benjamin and Gojobori, Takashi and Sasaki, Takuji and Rice Annotation Project and for the Rice Annotation Project
Genome research, ISSN 1088-9051, 02/2007, Volume 17, Issue 2, pp. 175 - 183
Journal Article
Genes & Genetic Systems, ISSN 1341-7568, 2004, Volume 79, Issue 6, pp. 391 - 391
Non-coding RNAs (ncRNAs) play important roles in a variety of biological processes. However, it has been suggested that there are many unidentified ncRNAs in... 
Journal Article
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