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Briefings in Bioinformatics, ISSN 1467-5463, 01/2011, Volume 12, Issue 1, pp. 41 - 51
Journal Article
Nature genetics, ISSN 1061-4036, 3/2015, Volume 47, Issue 3, pp. 276 - 283
We describe a novel computational method for estimating the probability that a point mutation at each position in a genome will influence fitness. These... 
Journal Article
Molecular Ecology Resources, ISSN 1755-098X, 09/2009, Volume 9, Issue 5, pp. 1322 - 1332
Genetic clustering algorithms require a certain amount of data to produce informative results. In the common situation that individuals are sampled at several... 
Population structure | Divergence | Prior distribution | Admixture | prior distribution | MULTILOCUS GENOTYPE DATA | admixture | population structure | BIOCHEMISTRY & MOLECULAR BIOLOGY | MARKERS | LOCI | INFERENCE | IDENTIFICATION | divergence | EVOLUTIONARY BIOLOGY | NULL ALLELES | GENETICS | ECOLOGY | DIFFERENTIATION | Analysis | Algorithms | Universities and colleges
Journal Article
Nature Genetics, ISSN 1061-4036, 10/2011, Volume 43, Issue 10, pp. 1031 - 1035
Journal Article
PLoS Genetics, ISSN 1553-7390, 05/2014, Volume 10, Issue 5
  The complex correlation structure of a collection of orthologous DNA sequences is uniquely captured by the "ancestral recombination graph" (ARG), a complete... 
Computers | Algorithms | Genealogy | Genomics | Colleges & universities | Evolution | Population | Genomes | Experiments | Chromosomes | Deoxyribonucleic acid--DNA
Journal Article
by Lindblad-Toh, Kerstin and Garber, Manuel and Zuk, Or and Lin, Michael F and Parker, Brian J and Washietl, Stefan and Kheradpour, Pouya and Ernst, Jason and Jordan, Gregory and Mauceli, Evan and Ward, Lucas D and Lowe, Craig B and Holloway, Alisha K and Clamp, Michele and Gnerre, Sante and Alföldi, Jessica and Beal, Kathryn and Chang, Jean and Clawson, Hiram and Cuff, James and Di Palma, Federica and Fitzgerald, Stephen and Flicek, Paul and Guttman, Mitchell and Hubisz, Melissa J and Jaffe, David B and Jungreis, Irwin and Kent, W. James and Kostka, Dennis and Lara, Marcia and Martins, Andre L and Massingham, Tim and Moltke, Ida and Raney, Brian J and Rasmussen, Matthew D and Robinson, Jim and Stark, Alexander and Vilella, Albert J and Wen, Jiayu and Xie, Xiaohui and Zody, Michael C and Worley, Kim C and Kovar, Christie L and Muzny, Donna M and Gibbs, Richard A and Warren, Wesley C and Mardis, Elaine R and Weinstock, George M and Wilson, Richard K and Birney, Ewan and Margulies, Elliott H and Herrero, Javier and Green, Eric D and Haussler, David and Siepel, Adam and Goldman, Nick and Pollard, Katherine S and Pedersen, Jakob S and Lander, Eric S and Kellis, Manolis and Baldwin, Jen and Bloom, Toby and Chin, Chee Whye and Heiman, Dave and Nicol, Robert and Nusbaum, Chad and Young, Sarah and Wilkinson, Jane and Cree, Andrew and Dihn, Huyen H and Fowler, Gerald and Jhangiani, Shalili and Joshi, Vandita and Lee, Sandra and Lewis, Lora R and Nazareth, Lynne V and Okwuonu, Geoffrey and Santibanez, Jireh and Delehaunty, Kim and Dooling, David and Fronik, Catrina and Fulton, Lucinda and Fulton, Bob and Graves, Tina and Minx, Patrick and Sodergren, Erica and Broad Inst and Washington Univ and Baylor Coll Med and Genome Institute at Washington University and Broad Institute Sequencing Platform and Whole Genome Assembly Team and Baylor College of Medicine Human Genome Sequencing Center Sequencing Team and Medicinska fakulteten and Science for Life Laboratory, SciLifeLab and Medicinska och farmaceutiska vetenskapsområdet and Institutionen för medicinsk biokemi och mikrobiologi and Uppsala universitet
Nature, ISSN 0028-0836, 10/2011, Volume 478, Issue 7370, pp. 476 - 482
Journal Article
PLoS Genetics, ISSN 1553-7390, 08/2013, Volume 9, Issue 8
  GC-biased gene conversion (gBGC) is a recombination-associated process that favors the fixation of G/C alleles over A/T alleles. In mammals, gBGC is... 
Studies | Evolution | Mutation | Bias | Genomics
Journal Article
PLoS Genetics, ISSN 1553-7390, 08/2008, Volume 4, Issue 8, pp. e1000144 - e1000144
Journal Article
Molecular Biology and Evolution, ISSN 0737-4038, 11/2012, Volume 29, Issue 11, p. 3309
  The prominent role of Horizontal Gene Transfer (HGT) in the evolution of bacteria is now well documented, but few studies have differentiated between... 
Pathogens | Genomics | Gram-positive bacteria | Phylogenetics | Evolution | Deoxyribonucleic acid--DNA
Journal Article