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Molecular Biology and Evolution, ISSN 0737-4038, 06/2016, Volume 33, Issue 6, pp. 1635 - 1638
The Environment for Tree Exploration (ETE) is a computational framework that simplifies the reconstruction, analysis, and visualization of phylogenetic trees... 
Hypothesis testing | Tree comparison | Phylogenetics | NCBI taxonomy | tree visualization | Phylogenomics | Sequence Alignment - methods | Computational Biology - methods | Genomics | Databases, Genetic | Models, Genetic | Software | Internet | Phylogeny | Evolution, Molecular | Taxonomy | Index Medicus | Tree visualization | tree comparison | hypothesis testing | Resource | phylogenetics | phylogenomics
Journal Article
BMC Bioinformatics, ISSN 1471-2105, 01/2010, Volume 11, Issue 1, pp. 24 - 24
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 01/2014, Volume 42, Issue 1, pp. D897 - D902
Phylogenetic trees representing the evolutionary relationships of homologous genes are the entry point for many evolutionary analyses. For instance, the use of... 
GENE | DATABASE | INFORMATION | ANNOTATION | FAMILIES | BIOCHEMISTRY & MOLECULAR BIOLOGY | SEQUENCE | STANDARDS | PHYLOGENETIC TREES | ORTHOLOGY | RESOURCE | Proteins - genetics | Humans | Databases, Genetic | Proteome | Gene Expression Profiling | Proteins - classification | Internet | Phylogeny | Genome | Index Medicus | Filogènia | Genètica | Genòmica | V. Human genome, model organisms, comparative genomics
Journal Article
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 01/2015, Volume 43, Issue 1, pp. D447 - D452
The many functional partnerships and interactions that occur between proteins are at the core of cellular processing and their systematic characterization... 
HIGH-THROUGHPUT | SERVER | BIOCHEMISTRY & MOLECULAR BIOLOGY | KNOWLEDGE | SEQUENCE | INTACT | CURATION | MOLECULAR INTERACTION DATABASE | CONTEXT | PREDICTION | Proteins - genetics | Proteins - metabolism | Databases, Protein | Gene Expression Profiling | Proteins - classification | Software | Internet | Protein Interaction Mapping | Index Medicus | Database Issue
Journal Article
Gut, ISSN 0017-5749, 2019, Volume 68, Issue 10, pp. gutjnl-2018-317715 - 1790
The composition of the healthy human adult gut microbiome is relatively stable over prolonged periods, and representatives of the most highly abundant and... 
molecular genetics | intestinal microbiology | antibiotics | bacterial overgrowth | Index Medicus | Abridged Index Medicus
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 03/2011, Volume 39, Issue 5, pp. e32 - e32
Reliable prediction of orthology is central to comparative genomics. Approaches based on phylogenetic analyses closely resemble the original definition of... 
DUPLICATION | TREES | GENE | BIOCHEMISTRY & MOLECULAR BIOLOGY | TOOL | Proteins - genetics | Proteins - classification | Software | Phylogeny | Genome | Genomics - methods | Index Medicus | Filogènia | Genòmica | Methods Online
Journal Article
Nature, ISSN 0028-0836, 08/2018, Volume 560, Issue 7717, pp. 233 - 237
Soils harbour some of the most diverse microbiomes on Earth and are essential for both nutrient cycling and carbon storage. To understand soil functioning, it... 
BIODIVERSITY | READ ALIGNMENT | ACCURATE | SEQUENCES | BIOGEOGRAPHY | FUNGAL | MULTIDISCIPLINARY SCIENCES | SOIL | DIVERSITY | BACTERIAL | COMMUNITIES | Metagenomics | Microbiota - physiology | Oceans and Seas | Seawater - microbiology | Soil Microbiology | Fungi - isolation & purification | Drug Resistance, Microbial - genetics | Biodiversity | Bacteria - genetics | DNA Barcoding, Taxonomic | Fungi - genetics | Bacteria - isolation & purification | Rain | Microbiota - genetics | Earth (Planet) | Hydrogen-Ion Concentration | Identification and classification | Soil microbiology | Microbial activity | Cycles | Communities | Ecosystems | Taxonomy | Carbon storage | Genes | Microbiomes | Biogeography | Genomes | Biomass | Fungi | Datasets | Antagonism | Precipitation | Microorganisms | Phylogenetics | Bacteria | Nutrients | Carbon capture and storage | Bioinformatics | Deoxyribonucleic acid--DNA | Distribution patterns | Soil chemistry | Topsoil | Composition | Filtration | Genetic diversity | Carbon sequestration | Carbon cycle | Soils | Soil pH | Soil microorganisms | Antibiotics | Nutrient cycles | Structure-function relationships | Index Medicus | Biological Sciences | Miljövetenskap | Microbiology | Mikrobiologi | Ecology | Geovetenskap och miljövetenskap | Naturvetenskap | Biologiska vetenskaper | Evolutionsbiologi | Natural Sciences | Evolutionary Biology | Ekologi | Earth and Related Environmental Sciences | Environmental Sciences | EPS | Bioinformatica
Journal Article
Nature Methods, ISSN 1548-7091, 05/2016, Volume 13, Issue 5, pp. 425 - 430
Journal Article