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Chest, ISSN 0012-3692, 2014, Volume 145, Issue 3, pp. 311A-1 - 311A-2
Journal Article
American Journal of Otolaryngology--Head and Neck Medicine and Surgery, ISSN 0196-0709, 2012, Volume 33, Issue 5, pp. 581 - 584
Journal Article
by Sanchez-Vega, Francisco and Mina, Marco and Armenia, Joshua and Chatila, Walid K and Luna, Augustin and Kantheti, Havish S and Saghafinia, Sadegh and Chakravarty, Debyani and Gao, Qingsong and Bailey, Matthew H and Liang, Wen-Wei and Foltz, Steven M and Shmulevich, Ilya and Ding, Li and Heins, Zachary and Ochoa, Angelica and Zhang, Hongxin and Kundra, Ritika and Kandoth, Cyriac and Dervishi, Leonard and Zhou, Wanding and Shen, Hui and Laird, Peter W and Way, Gregory P and Greene, Casey S and Liang, Han and Xiao, Yonghong and Wang, Chen and Bivona, Trever G and Lazar, Alexander J and Hammer, Gary D and Giordano, Thomas and Kwong, Lawrence N and McArthur, Grant and McCormick, Frank and Meyerson, Matthew and Cherniack, Andrew D and Ciriello, Giovanni and Caesar-Johnson, Samantha J and Demchok, John A and Felau, Ina and Kasapi, Melpomeni and Ferguson, Martin L and Hutter, Carolyn M and Sofia, Heidi J and Yang, Liming and Zhang, Jiashan (Julia) and Chudamani, Sudha and Lolla, Laxmi and Pihl, Todd and Sun, Qiang and Wan, Yunhu and Wu, Ye and Getz, Gad and Heiman, David I and Lin, Pei and Meier, Sam and Saksena, Gordon and Zhang, Hailei and Bernard, Brady and Chambwe, Nyasha and Leinonen, Kalle and Liu, Yuexin and Miller, Michael and Zhang, Wei and Akbani, Rehan and Broom, Bradley M and Ju, Zhenlin and Kanchi, Rupa S and Korkut, Anil and Li, Jun and Liu, Wenbin and Lu, Yiling and Ng, Kwok-Shing and Ryan, Michael and Weinstein, John N and Zhang, Jiexin and Abeshouse, Adam and de Bruijn, Ino and Heins, Zachary J and Ladanyi, Marc and Nissan, Moriah G and Sheridan, Robert and Sumer, S. Onur and Sun, Yichao and Anur, Pavana and Peto, Myron and Stuart, Joshua M and Wong, Christopher K and Hayes, D. Neil and Ally, Adrian and Balasundaram, Miruna and Bowlby, Reanne and Carlsen, Rebecca and Chuah, Eric and Holt, Robert and Jones, Steven J.M and Kasaian, Katayoon and Ma, Yussanne and Mayo, Michael and ... and The Cancer Genome Atlas Research Network and Cancer Genome Atlas Res Network and Cancer Genome Atlas Research Network
Cell (Cambridge), ISSN 0092-8674, 04/2018, Volume 173, Issue 2, pp. 321 - 337.e10
Journal Article
by Bailey, Matthew H and Tokheim, Collin and Bertrand, Denis and Colaprico, Antonio and Wendl, Michael C and Jeong, Kang Jin and Cao, Song and Wang, Zixing and Gao, Qingsong and Wang, Fang and Mularoni, Loris and Rubio-Perez, Carlota and Cortés-Ciriano, Isidro and Liang, Wen-Wei and Hess, Julian M and Yellapantula, Venkata D and Tamborero, David and Gonzalez-Perez, Abel and Park, Peter J and Van Allen, Eliezer M and Liang, Han and Godzik, Adam and Lopez-Bigas, Nuria and Stuart, Josh and Getz, Gad and Chen, Ken and Lazar, Alexander J and Mills, Gordon B and Karchin, Rachel and Ding, Li and Demchok, John A and Kasapi, Melpomeni and Hutter, Carolyn M and Sofia, Heidi J and Tarnuzzer, Roy and Yang, Liming and Zenklusen, Jean C and Chudamani, Sudha and Naresh, Rashi and Pihl, Todd and Sun, Qiang and Wan, Yunhu and Wu, Ye and Cho, Juok and DeFreitas, Timothy and Frazer, Scott and Gehlenborg, Nils and Heiman, David I and Lin, Pei and Meier, Sam and Noble, Michael S and Voet, Doug and Zhang, Hailei and Bernard, Brady and Leinonen, Kalle and Liu, Yuexin and Miller, Michael and Shmulevich, Ilya and Zhang, Wei and Akbani, Rehan and Broom, Bradley M and Hegde, Apurva M and Ju, Zhenlin and Kanchi, Rupa S and Li, Jun and Liu, Wenbin and Lu, Yiling and Ng, Kwok-Shing and Ryan, Michael and Weinstein, John N and Zhang, Jiexin and Abeshouse, Adam and Armenia, Joshua and Chakravarty, Debyani and Chatila, Walid K and de Bruijn, Ino and Gross, Benjamin E and Kundra, Ritika and La, Konnor and Luna, Augustin and Ochoa, Angelica and Phillips, Sarah M and Reznik, Ed and Sanchez-Vega, Francisco and Sander, Chris and Schultz, Nikolaus and Sheridan, Robert and Sumer, S. Onur and Taylor, Barry S and Wang, Jioajiao and Wong, Christopher K and Hayes, D. Neil and Parker, Joel S and Ally, Adrian and Balasundaram, Miruna and Bowlby, Reanne and Carlsen, Rebecca and Chuah, Eric and Kasaian, Katayoon and Lee, Darlene and ... and The MC3 Working Group and The Cancer Genome Atlas Research Network and Canc Genome Atlas Res Network and MC3 Working Grp
Cell (Cambridge), ISSN 0092-8674, 04/2018, Volume 173, Issue 2, pp. 371 - 385.e18
Identifying molecular cancer drivers is critical for precision oncology. Multiple advanced algorithms to identify drivers now exist, but systematic attempts to... 
structure analysis | mutations of clinical relevance | oncology | driver gene discovery | Biochemistry, Genetics and Molecular Biology(all) | Biochemistry & Molecular Biology | Life Sciences & Biomedicine | Science & Technology | Cell Biology | Index Medicus | Oncology | driver discovery
Journal Article
by Lichtenberg, Tara and Lazar, Alexander J and Cherniack, Andrew D and Kovatich, Albert J and Benz, Christopher C and Levine, Douglas A and Omberg, Larsson and Wolf, Denise M and Shriver, Craig D and Thorsson, Vesteinn and Hu, Hai and Caesar-Johnson, Samantha J and Demchok, John A and Felau, Ina and Kasapi, Melpomeni and Ferguson, Martin L and Tarnuzzer, Roy and Wang, Zhining and Zenklusen, Jean C and Zhang, Jiashan (Julia) and Liu, Jia and Lolla, Laxmi and Naresh, Rashi and Pihl, Todd and Sun, Qiang and Wu, Ye and Cho, Juok and DeFreitas, Timothy and Frazer, Scott and Gehlenborg, Nils and Getz, Gad and Kim, Jaegil and Lawrence, Michael S and Meier, Sam and Voet, Doug and Zhang, Hailei and Chambwe, Nyasha and Dhankani, Varsha and Knijnenburg, Theo and Kramer, Roger and Miller, Michael and Reynolds, Sheila and Shmulevich, Ilya and Akbani, Rehan and Broom, Bradley M and Kanchi, Rupa S and Korkut, Anil and Li, Jun and Liang, Han and Ling, Shiyun and Mills, Gordon B and Rao, Arvind and Ryan, Michael and Wang, Jing and Weinstein, John N and Zhang, Jiexin and Abeshouse, Adam and Armenia, Joshua and Chakravarty, Debyani and Chatila, Walid K and de Bruijn, Ino and Gao, Jianjiong and Gross, Benjamin E and Kundra, Ritika and Ladanyi, Marc and Luna, Augustin and Nissan, Moriah G and Ochoa, Angelica and Phillips, Sarah M and Reznik, Ed and Sander, Chris and Sheridan, Robert and Taylor, Barry S and Wang, Jioajiao and Peto, Myron and Spellman, Paul and Wilkerson, Matthew D and Brooks, Denise and Chuah, Eric and Dhalla, Noreen and Holt, Robert and Jones, Steven J.M and Lee, Darlene and Marra, Marco A and Moore, Richard A and Mungall, Andrew J and Mungall, Karen and Robertson, A. Gordon and Sadeghi, Sara and Schein, Jacqueline E and Sipahimalani, Payal and Tam, Angela and Thiessen, Nina and Tse, Kane and Wong, Tina and Beroukhim, Rameen and Gao, Galen F and Ha, Gavin and Meyerson, Matthew and Schumacher, Steven E and ... and The Cancer Genome Atlas Research Network and Canc Genome Atlas Res Network and Cancer Genome Atlas Research Network
Cell (Cambridge), ISSN 0092-8674, 04/2018, Volume 173, Issue 2, pp. 400 - 416.e11
Journal Article
by Linehan, W. Marston and Spellman, Paul T and Ricketts, Christopher J and Creighton, Chad J and Fei, Suzanne S and Davis, Caleb and Wheeler, David A and Murray, Bradley A and Schmidt, Laura and Vocke, Cathy D and Peto, Myron and Al Mamun, Abu Amar M and Shinbrot, Eve and Sethi, Anurag and Brooks, Samira and Rathmell, W. Kimryn and Brooks, Angela N and Hoadley, Katherine A and Robertson, A. Gordon and Brooks, Denise and Bowlby, Reanne and Sadeghi, Sara and Shen, Hui and Weisenberger, Daniel J and Bootwalla, Moiz and Baylin, Stephen B and Laird, Peter W and Cherniack, Andrew D and Saksena, Gordon and Haake, Scott and Li, Jun and Liang, Han and Lu, Yiling and Mills, Gordon B and Akbani, Rehan and Leiserson, Mark D.M and Raphael, Benjamin J and Anur, Pavana and Bottaro, Donald and Albiges, Laurence and Barnabas, Nandita and Choueiri, Toni K and Czerniak, Bogdan and Godwin, Andrew K and Hakimi, A. Ari and Ho, Thai H and Hsieh, James and Ittmann, Michael and Kim, William Y and Krishnan, Bhavani and Merino, Maria J and Shaw, Kenna R. Mills and Reuter, Victor E and Reznik, Ed and Shelley, Carl S and Shuch, Brian and Signoretti, Sabina and Srinivasan, Ramaprasad and Tamboli, Pheroze and Thomas, George and Tickoo, Satish and Burnett, Kenneth and Crain, Daniel and Gardner, Johanna and Lau, Kevin and Mallery, David and Morris, Scott and Paulauskis, Joseph D and Penny, Robert J and Shelton, Candace and Shelton, W. Troy and Sherman, Mark and Thompson, Eric and Yena, Peggy and Avedon, Melissa T and Bowen, Jay and Gastier-Foster, Julie M and Gerken, Mark and Leraas, Kristen M and Lichtenberg, Tara M and Ramirez, Nilsa C and Santos, Tracie and Wise, Lisa and Zmuda, Erik and Demchok, John A and Felau, Ina and Hutter, Carolyn M and Sheth, Margi and Sofia, Heidi J and Tarnuzzer, Roy and Wang, Zhining and Yang, Liming and Zenklusen, Jean C and Zhang, Jiashan and Ayala, Brenda and Baboud, Julien and Chudamani, Sudha and Liu, Jia and Lolla, Laxmi and Naresh, Rashi and ... and The Cancer Genome Atlas Research Network and Canc Genome Atlas Res Network and Cancer Genome Atlas Research Network
The New England journal of medicine, ISSN 1533-4406, 01/2016, Volume 374, Issue 2, pp. 135 - 145
Journal Article
by Kim, Jihun and Bowlby, Reanne and Mungall, Andrew J and Robertson, A. Gordon and Odze, Robert D and Cherniack, Andrew D and Shih, Juliann and Pedamallu, Chandra Sekhar and Cibulskis, Carrie and Dunford, Andrew and Meier, Samuel R and Kim, Jaegil and Raphael, J and Wu, Hsin-Ta and Wong, Alexandra M and Willis, Joseph E and Bass, Adam J and Derks, Sarah and Garman, Katherine and McCall, Shannon J and Wiznerowicz, MacIej and Pantazi, Angeliki and Parfenov, Michael and Thorsson, Vésteinn and Shmulevich, Ilya and Dhankani, Varsha and Miller, Michael and Sakai, Ku Leuven Ryo and Wang, Kenneth and Schultz, Nikolaus and Shen, Ronglai and Arora, Arshi and Weinhold, Nils and Sánchez-Vega, Francisco and Kelsen, David P and Zhang, Julia and Felau, Ina and Demchok, John and Rabkin, Charles S and Camargo, M. Constanza and Zenklusen, Jean Claude and Bowen, Jay and Leraas, Kristen and Lichtenberg, Tara M and Curtis, Christina and Seoane, Jose A and Ojesina, Akinyemi I and Beer, David G and Gulley, Margaret L and Pennathur, Arjun and Luketich, James D and Zhou, Zhongren and Weisenberger, Daniel J and Akbani, Rehan and Lee, Ju-Seog and Liu, Wenbin and Mills, Gordon B and Zhang, Wei and Reid, Brian J and Hinoue, Toshinori and Laird, Peter W and Shen, Hui and Piazuelo, M. Blanca and Schneider, Barbara G and McLellan, Michael and Taylor-Weiner, Amaro and Lawrence, Michael and Cibulskis, Kristian and Stewart, Chip and Getz, Gad and Lander, Eric and Gabriel, Stacey B and DIng, Li and McLellan, Michael D and Miller, Christopher A and Appelbaum, Elizabeth L and Cordes, Matthew G and Fronick, Catrina C and Fulton, Lucinda A and Mardis, Elaine R and Wilson, Richard K and Schmidt, Heather K and Fulton, Robert S and Ally, Adrian and Balasundaram, Miruna and Carlsen, Rebecca and Chuah, Eric and Dhalla, Noreen and Holt, Robert A and Jones, Steven J. M and Kasaian, Katayoon and Brooks, Denise and Li, Haiyan I and Ma, Yussanne and Marra, Marco A and Mayo, Michael and Moore, Richard A and Mungall, Karen L and Schein, Jacqueline E and Sipahimalani, Payal and ... and The Cancer Genome Atlas Research Network and Canc Genome Atlas Res Network and Data Coordination Center: CSRA Inc and Duke University and Ribeirão Preto Medical School and Israelitisches Krankenhaus Hamburg and Project Team: National Institutes of Health and Tissue Source Sites: Analytic Biologic Services and Nationwide Children’s Hospital and Greater Poland Cancer Centre and Brown University and University of Michigan and Mayo Clinic and Broad Institute and Keimyung University School of Medicine and Asan Medical Center and Barretos Cancer Hospital and University of Alabama and Indiana University School of Medicine and Invidumed and National Cancer Center Goyang and Yonsei University College of Medicine and Vanderbilt University and University of North Carolina at Chapel Hill and Cureline and Cancer Genome Atlas Research Network and Institute of Oncology of Moldova and University of Pittsburgh School of Medicine and University of Pittsburgh and Genome Characterization Centers: BC Cancer Agency and Analysis Working Group: Asan University and University of Texas MD Anderson Cancer Center and Case Western Reserve University and National Cancer Institute and Genome Data Analysis Centers: Broad Institute and St. Joseph’s Hospital &Medical Center and University of Southern California and Institute for Systems Biology and Ontario Tumour Bank and University of Washington and University of Rochester and Harvard Medical School and KU Leuven and Genome Sequencing Center: Broad Institute and Brigham and Women’s Hospital and Memorial Sloan Kettering Cancer Center and Disease Working Group: Duke University and Erasmus University and Christiana Care Health System and University of Kansas Medical Center and Research Institute at Nationwide Children’s Hospital and International Genomics Consortium and Tayside Tissue Bank and Peter MacCallum Cancer Centre and Pusan National University Medical School and Sidney Kimmel Comprehensive Cancer Center at Johns Hopkins University and BioreclamationIVT and Dana-Farber Cancer Institute and University of Southern California Epigenome Center and Stanford University and BC Cancer Agency and Chonnam National University Medical School and St. Petersburg Academic University and University of North Carolina and University of Dundee and Van Andel Research Institute and Washington University in St. Louis and Emory University and Washington University and University of California Santa Cruz and Biospecimen Core Resource: International Genomics Consortium and Asterand Bioscience and Botkin Municipal Clinic
Nature (London), ISSN 1476-4687, 01/2017, Volume 541, Issue 7636, pp. 169 - 175
Journal Article