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Environmental Microbiology, ISSN 1462-2912, 12/2015, Volume 17, Issue 12, pp. 4994 - 5007
The bacterioplankton diversity in large rivers has thus far been under-sampled despite the importance of streams and rivers as components of continental... 
Water, Underground | Bacteria | Rivers | RNA | Biological diversity
Journal Article
Gut, ISSN 0017-5749, 06/2019, Volume 68, Issue Suppl 2, p. A69
IntroductionCurrently only 1/3 of inflammatory bowel disease (IBD) patients respond to the frontline therapies, but recent successes in stratification of... 
Flow cytometry | Inflammatory bowel diseases | Cytokines | Leukocytes (mononuclear) | Gene expression | Patients | Population levels | Inflammatory bowel disease | Molecular modelling | Intestine | Biopsy | Parathyroid hormone | Phenotyping | Peripheral blood mononuclear cells | Remission | Ulcerative colitis
Journal Article
Scientific Reports, ISSN 2045-2322, 12/2019, Volume 9, Issue 1, pp. 1 - 17
Microbial ecology studies are often performed through extraction of metagenomic DNA followed by amplification and sequencing of a marker. It is known that each... 
Fungi | rRNA 28S | Primers | Bias | rRNA 18S | Deoxyribonucleic acid--DNA | DNA sequencing
Journal Article
Environmental Microbiology, ISSN 1462-2912, 02/2019, Volume 21, Issue 2, pp. 827 - 844
Journal Article
American Journal of Gastroenterology, ISSN 0002-9270, 07/2016, Volume 111, Issue 7, pp. 1033 - 1034
Journal Article
ISSN 1359-6640, 8/2019, Volume 218, pp. 481 - 54
We present here a data-driven systems biology framework for the rational design of biotechnological solutions for contaminated environments with the aim of... 
Journal Article
BMC Bioinformatics, ISSN 1471-2105, 03/2016, Volume 17, Issue 1, pp. 125 - 125
Background: Illumina's sequencing platforms are currently the most utilised sequencing systems worldwide. The technology has rapidly evolved over recent years... 
Error profiles | Metagenomics | Transposome bias | Illumina | Sequencing errors | Sequencing-by-synthesis | QUANTITIES | BIOCHEMICAL RESEARCH METHODS | DNA-POLYMERASES | LIBRARIES | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | MATHEMATICAL & COMPUTATIONAL BIOLOGY | GENERATION | TN5 | Nucleotide sequencing | Genomics | Methods | DNA sequencing | Index Medicus
Journal Article
EBioMedicine, ISSN 2352-3964, 05/2019, Volume 43, pp. 325 - 332
Background: The predominance of specific bacteria such as adherent-invasive Escherichia coli (AIEC) within the Crohn's disease (CD) intestine remains poorly... 
Journal Article
Journal Article
Scientific Reports, ISSN 2045-2322, 12/2018, Volume 8, Issue 1, pp. 1 - 12
The microbial community in anaerobic digestion has been analysed through microbial fingerprinting techniques, such as terminal restriction fragment length... 
Anaerobic microorganisms | rRNA 16S | Statistical analysis | Restriction fragment length polymorphism | Fingerprinting | Data processing | Phylogeny | Gene polymorphism | Anaerobic digestion | Polymorphism | Community composition
Journal Article
The ISME Journal, ISSN 1751-7362, 06/2019
Sea ice is a crucial component of the Arctic climate system, yet the tools to document the evolution of sea ice conditions on historical and geological time... 
Journal Article
Proceedings of the IEEE, ISSN 0018-9219, 2017, Volume 105, Issue 3, pp. 516 - 529
Neutral models which assume ecological equivalence between species provide null models for community assembly. In Hubbell's unified neutral theory of... 
Journal Article