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1. Full Text Tet Proteins Can Convert 5-Methylcytosine to 5-Formylcytosine and 5-Carboxylcytosine
by Shinsuke Ito and Li Shen and Qing Dai and Susan C. Wu and Leonard B. Collins and James A. Swenberg and Chuan He and Yi Zhang
Science (American Association for the Advancement of Science), ISSN 0036-8075, 9/2011, Volume 333, Issue 6047, pp. 1300 - 1303
Proteins | Enzymes | Mass spectrometers | HEK293 cells | Quantification | DNA | Genomics | REPORTS | Stem cells | Oxidation | Embryonic stem cells | Science & Technology - Other Topics | Multidisciplinary Sciences | Science & Technology | Fundamental and applied biological sciences. Psychology | Biological and medical sciences | Transcription. Transcription factor. Splicing. Rna processing | Molecular and cellular biology | Molecular genetics | Proto-Oncogene Proteins - metabolism | Cell Line | Cytosine - analogs & derivatives | Embryonic Stem Cells - metabolism | Oxidation-Reduction | Humans | Proto-Oncogene Proteins - genetics | DNA - metabolism | DNA-Binding Proteins - genetics | Recombinant Fusion Proteins - metabolism | DNA-Binding Proteins - metabolism | DNA Methylation | Animals | 5-Methylcytosine - metabolism | Cytosine - metabolism | Mice | Physiological aspects | Cytosine | Research | Gene expression | DNA methylation | Glycosylation | Index Medicus
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2. Full Text Role of Tet proteins in 5mC to 5hmC conversion, ES-cell self-renewal and inner cell mass specification
by Ito, Shinsuke and D'Alessio, Ana C and Taranova, Olena V and Zhang, Yi and Hong, Kwonho and Sowers, Lawrence C
Nature (London), ISSN 0028-0836, 08/2010, Volume 466, Issue 7310, pp. 1129 - 1133
Science & Technology - Other Topics | Multidisciplinary Sciences | Science & Technology | Fundamental and applied biological sciences. Psychology | Biological and medical sciences | Cell physiology | Molecular and cellular biology | Cell differentiation, maturation, development, hematopoiesis | Proto-Oncogene Proteins - metabolism | Cytosine - analogs & derivatives | Cell Proliferation | Embryonic Stem Cells - cytology | Nanog Homeobox Protein | Homeodomain Proteins - metabolism | Alkaline Phosphatase - metabolism | Proto-Oncogene Proteins - genetics | DNA-Binding Proteins - genetics | Gene Knockdown Techniques | DNA-Binding Proteins - metabolism | Animals | 5-Methylcytosine - metabolism | Blastocyst Inner Cell Mass - metabolism | Cytosine - metabolism | Gene Expression Regulation, Developmental | Mice | Proteins | Deoxyribonucleic acid--DNA | Binding sites | Apoptosis | Index Medicus
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3. Full Text Epigenetic modifications in DNA could mimic oxidative DNA damage: A double-edged sword
by Ito, Shinsuke and Kuraoka, Isao
DNA repair, ISSN 1568-7864, 08/2015, Volume 32, pp. 52 - 57
Deamination | TET proteins | TDG | Mismatch repair | DNA methylation | DNA demethylation | Base excision repair | Toxicology | Genetics & Heredity | Life Sciences & Biomedicine | Science & Technology | Cytosine - analogs & derivatives | Gene Expression | Oxidation-Reduction | Epigenesis, Genetic | Humans | Base Pair Mismatch | Thymine DNA Glycosylase - metabolism | DNA Methylation | Molecular Mimicry | 5-Methylcytosine - metabolism | Cytosine - metabolism | DNA Repair | CpG Islands | Thymine DNA Glycosylase - genetics | DNA Damage | Epigenetic inheritance | Embryonic development | Methylation | Gene expression | DNA damage | DNA | Proteins | Pyrimidines | Genes | Genetic research | Index Medicus
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4. Full Text Abolishing user fees, fertility choice, and educational attainment
by Ito, Takahiro and Tanaka, Shinsuke
Journal of development economics, ISSN 0304-3878, 01/2018, Volume 130, pp. 33 - 44
I18 | User fees | O15 | Fertility | Education | South Africa | I15 | J13 | Economics | Business & Economics | Social Sciences
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5. Full Text EUS-guided celiac plexus neurolysis versus medication alone for unresectable pancreatic cancer Response
by Kanno, Yoshihide and Koshita, Shinsuke and Ito, Kei
Gastrointestinal endoscopy, ISSN 0016-5107, 11/2020, Volume 92, Issue 5, pp. 1144 - 1144
Gastroenterology & Hepatology | Life Sciences & Biomedicine | Science & Technology
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6. Full Text Dual functions of Tet1 in transcriptional regulation in mouse embryonic stem cells
by Wu, Hao and D'Alessio, Ana C and Ito, Shinsuke and Xia, Kai and Wang, Zhibin and Cui, Kairong and Zhao, Keji and Eve Sun, Yi and Zhang, Yi
Nature (London), ISSN 0028-0836, 05/2011, Volume 473, Issue 7347, pp. 389 - 394
Science & Technology - Other Topics | Multidisciplinary Sciences | Science & Technology | Fundamental and applied biological sciences. Psychology | Biological and medical sciences | Transcription. Transcription factor. Splicing. Rna processing | Molecular and cellular biology | Molecular genetics | Proto-Oncogene Proteins - metabolism | Cell Line | Chromatin - metabolism | Cytosine - analogs & derivatives | Embryonic Stem Cells - metabolism | 5-Methylcytosine - analogs & derivatives | Gene Silencing | Genome - genetics | Polycomb-Group Proteins | Promoter Regions, Genetic - genetics | DNA-Binding Proteins - metabolism | DNA Methylation | Animals | Cytosine - metabolism | Gene Expression Regulation, Developmental | CpG Islands - genetics | Transcription, Genetic | Mice | Repressor Proteins - metabolism | Physiological aspects | Genetic aspects | Research | Genetic transcription | DNA binding proteins | Embryonic stem cells | Methylation | Proteins | Studies | DNA methylation | Genetics | Genomes | Gene expression | Experiments | Binding sites | Independent sample | Index Medicus
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7. Full Text Genome-wide analysis of 5-hydroxymethylcytosine distribution reveals its dual function in transcriptional regulation in mouse embryonic stem cells
by Wu, Hao and D'Alessio, Ana C and Ito, Shinsuke and Wang, Zhibin and Cui, Kairong and Zhao, Keji and Sun, Yi Eve and Zhang, Yi
Genes & development, ISSN 0890-9369, 04/2011, Volume 25, Issue 7, pp. 679 - 684
Polycomb repression | Tet1 | 5-hydroxymethylcytosine (5hmC) | Genome-wide 5hmC distribution | Mouse embryonic stem cells | 5-methylcytosine (5mC) | Genetics & Heredity | Life Sciences & Biomedicine | Developmental Biology | Science & Technology | Cell Biology | Proto-Oncogene Proteins - metabolism | Cell Line | Chromatin - metabolism | Cytosine - analogs & derivatives | Embryonic Stem Cells - metabolism | Genome-Wide Association Study | 5-Methylcytosine - analogs & derivatives | Gene Expression Profiling | Cytosine - chemistry | DNA-Binding Proteins - metabolism | Transcription Factors - metabolism | Animals | Cytosine - metabolism | Gene Expression Regulation, Developmental | Mice | Cytosine | Genetic aspects | Research | Genetic transcription | Embryonic stem cells | Analysis | Index Medicus | Research Communication | Tet1; 5-methylcytosine (5mC); 5-hydroxymethylcytosine (5hmC); mouse embryonic stem cells; genome-wide 5hmC distribution; Polycomb repression
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8. Full Text Suprabasin-null mice retain skin barrier function and show high contact hypersensitivity to nickel upon oral nickel loading
by Nakazawa, Shinsuke and Shimauchi, Takatoshi and Funakoshi, Atsuko and Aoshima, Masahiro and Phadungsaksawasdi, Pawit and Sakabe, Jun-ichi and Asakawa, Sanki and Hirasawa, Noriyasu and Ito, Taisuke and Tokura, Yoshiki
Scientific reports, ISSN 2045-2322, 09/2020, Volume 10, Issue 1, pp. 14559 - 14559
Science & Technology - Other Topics | Multidisciplinary Sciences | Science & Technology | Methyltestosterone | Premenopause | Mortality | Surgery | Breast cancer | Progesterone | Patients | ErbB-2 protein | Post-menopause | Index Medicus
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9. Full Text Risk factors for nonalcoholic fatty liver disease after gastrectomy for gastric cancer
by Kouzu, Keita and Tsujimoto, Hironori and Nishikawa, Makoto and Harada, Manabu and Sugihara, Takao and Nagata, Hiromi and Hiraki, Shuichi and Yaguchi, Yoshihisa and Takahata, Risa and Nomura, Shinsuke and Ito, Nozomi and Ishibashi, Yusuke and Itazaki, Yujiro and Tsuchiya, Satoshi and Hase, Kazuo and Kishi, Yoji and Ueno, Hideki
Gastric cancer : official journal of the International Gastric Cancer Association and the Japanese Gastric Cancer Association, ISSN 1436-3291, 03/2020, Volume 23, Issue 2, pp. 356 - 362
Adjuvant chemotherapy | Nonalcoholic fatty liver disease | Hepatic steatosis | Gastrectomy | Gastric cancer | Gastroenterology & Hepatology | Oncology | Life Sciences & Biomedicine | Science & Technology | Liver cancer | Medical research | Fatty liver | Adjuvant treatment | Medicine, Experimental | Metastasis | Stomach cancer | Risk factors | Cancer | Cholecystectomy | Liver diseases | Cholinesterase | Lymph nodes | Steatosis | Metastases | Chemotherapy | Computed tomography | Surgery | Gastrointestinal surgery | Index Medicus
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10. Full Text The CCR4-NOT deadenylase complex controls atg7-dependent cell death and heart function
by Yamaguchi, Tomokazu and Suzuki, Takashi and Sato, Teruki and Takahashi, Akinori and Watanabe, Hiroyuki and Kadowaki, Ayumi and Natsui, Miyuki and Inagaki, Hideaki and Arakawa, Satoko and Nakaoka, Shinji and Koizumi, Yukio and Seki, Shinsuke and Adachi, Shungo and Fukao, Akira and Fujiwara, Toshinobu and Natsume, Tohru and Kimura, Akinori and Komatsu, Masaaki and Shimizu, Shigeomi and Ito, Hiroshi and Suzuki, Yutaka and Penninger, Josef M and Yamamoto, Tadashi and Imai, Yumiko and Kuba, Keiji
Science signaling, ISSN 1945-0877, 02/2018, Volume 11, Issue 516, p. eaan3638
Biochemistry & Molecular Biology | Life Sciences & Biomedicine | Science & Technology | Cell Biology | Heart - physiopathology | Myocytes, Cardiac - cytology | Autophagy-Related Protein 7 - metabolism | Mice, Inbred C57BL | Cells, Cultured | Heart Failure - physiopathology | Heart Failure - genetics | Mice, Transgenic | Heart Failure - metabolism | Mice, 129 Strain | Poly A - genetics | Transcription Factors - genetics | Autophagy-Related Protein 7 - genetics | RNA Stability - genetics | Mice, Knockout | Transcription Factors - metabolism | Poly A - metabolism | Animals | Survival Analysis | Myocytes, Cardiac - metabolism | Autophagy - genetics | Drugs | Poly(A) | Catabolite repression | p53 Protein | Genes | Homeostasis | Heart function | Autophagy | Cell activation | Clonal deletion | Heart diseases | Heart failure | mRNA turnover | Medical treatment | Mortality | Cardiomyocytes | Gene expression | Organelles | Ablation | Side effects | Cell death | Polyadenylation | Mice | Vacuoles | Phagocytosis | Apoptosis | Index Medicus
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11. Full Text Polycomb in Transcriptional Phase Transition of Developmental Genes
by Kondo, Takashi and Ito, Shinsuke and Koseki, Haruhiko
Trends in biochemical sciences (Amsterdam. Regular ed.), ISSN 0968-0004, 01/2016, Volume 41, Issue 1, pp. 9 - 19
Life Sciences & Biomedicine | Biochemistry & Molecular Biology | Science & Technology | Chromatin - metabolism | Animals | Humans | Gene Expression Regulation, Developmental - genetics | Transcription, Genetic | Polycomb-Group Proteins - metabolism | Chromatin - genetics | Genetic aspects | Genetic transcription | Analysis | Genes | Index Medicus
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