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science & technology (43) 43
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1. Full Text High-Quality Binary Protein Interaction Map of the Yeast Interactome Network
by Haiyuan Yu and Pascal Braun and Muhammed A. Yildirim and Irma Lemmens and Kavitha Venkatesan and Julie Sahalie and Tomoko Hirozane-Kishikawa and Fana Gebreab and Na Li and Nicolas Simonis and Tong Hao and Jean-François Rual and Amélie Dricot and Alexei Vazquez and Ryan R. Murray and Christophe Simon and Leah Tardivo and Stanley Tam and Nenad Svrzikapa and Changyu Fan and Anne-Sophie de Smet and Adriana Motyl and Michael E. Hudson and Juyong Park and Xiaofeng Xin and Michael E. Cusick and Troy Moore and Charlie Boone and Michael Snyder and Frederick P. Roth and Albert-László Barabási and Jan Tavernier and David E. Hill and Marc Vidal
Science (American Association for the Advancement of Science), ISSN 0036-8075, 10/2008, Volume 322, Issue 5898, pp. 104 - 110
Datasets | Yeasts | Screening tests | Drug interactions | Molecular interactions | Principal components analysis | Connectivity | Reports | Open reading frames | Grants | Protein interaction mapping | Science & Technology - Other Topics | Multidisciplinary Sciences | Science & Technology | Fundamental and applied biological sciences. Psychology | Biological and medical sciences | Diverse techniques | Molecular and cellular biology | Signal Transduction | Saccharomyces cerevisiae - genetics | Computational Biology | Saccharomyces cerevisiae Proteins - genetics | Gene Regulatory Networks | Protein Interaction Mapping - standards | Saccharomyces cerevisiae - metabolism | Transcription Factors - metabolism | Protein Interaction Mapping - methods | Two-Hybrid System Techniques | Metabolic Networks and Pathways | Mass Spectrometry | Proteomics | Saccharomyces cerevisiae Proteins - metabolism | Protein Array Analysis | Protein Binding | Saccharomyces cerevisiae Proteins - isolation & purification | Proteome - metabolism | Physiological aspects | Genetic aspects | Research | Yeast fungi | Protein-protein interactions | Data analysis | Yeast | Cellular biology | Molecular biology | Spectrum analysis | Index Medicus
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2. Full Text Toward improving Caenorhabditis elegans phenome mapping with an ORFeome-based RNAi library
by Rual, Jaen-François and Ceron, Julian and Koreth, John and Hao, Tong and Nicot, Anne-Sophie and Hirozane-Kishikawa, Tomoko and Vandenhaute, Jean and Orkin, Stuart H and Hill, David E and van den Heuvel, Sander and Vidal, Marc
Genome research, ISSN 1088-9051, 2004, Volume 14, Issue 10 B, pp. 2162 - 2168
Biochemistry & Molecular Biology | Genetics & Heredity | Life Sciences & Biomedicine | Biotechnology & Applied Microbiology | Science & Technology | Open Reading Frames - physiology | Phenotype | Animals | Gene Library | RNA Interference | Caenorhabditis elegans - genetics | Gene Expression Regulation - genetics | Genotype | Genome | RNA, Helminth - genetics | Index Medicus | Resources
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3. Full Text A Protein Complex Network of Drosophila melanogaster
by Guruharsha, K.G and Rual, Jean-François and Zhai, Bo and Mintseris, Julian and Vaidya, Pujita and Vaidya, Namita and Beekman, Chapman and Wong, Christina and Rhee, David Y and Cenaj, Odise and McKillip, Emily and Shah, Saumini and Stapleton, Mark and Wan, Kenneth H and Yu, Charles and Parsa, Bayan and Carlson, Joseph W and Chen, Xiao and Kapadia, Bhaveen and VijayRaghavan, K and Gygi, Steven P and Celniker, Susan E and Obar, Robert A and Artavanis-Tsakonas, Spyros
Cell (Cambridge), ISSN 0092-8674, 2011, Volume 147, Issue 3, pp. 690 - 703
Biochemistry & Molecular Biology | Life Sciences & Biomedicine | Science & Technology | Cell Biology | Drosophila melanogaster - metabolism | Animals | Proteomics | Drosophila Proteins - genetics | Proteasome Endopeptidase Complex - metabolism | Drosophila Proteins - metabolism | SNARE Proteins - metabolism | Protein Interaction Mapping | Proteins | Mass spectrometry | Drosophila | Analysis | Genes | Index Medicus | interactome | protein complex map | proteome
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4. Full Text A Map of the Interactome Network of the Metazoan C. elegans
by Siming Li and Christopher M. Armstrong and Nicolas Bertin and Hui Ge and Stuart Milstein and Mike Boxem and Pierre-Olivier Vidalain and Jing-Dong J. Han and Alban Chesneau and Tong Hao and Debra S. Goldberg and Ning Li and Monica Martinez and Jean-François Rual and Philippe Lamesch and Lai Xu and Muneesh Tewari and Sharyl L. Wong and Lan V. Zhang and Gabriel F. Berriz and Laurent Jacotot and Philippe Vaglio and Jérôme Reboul and Tomoko Hirozane-Kishikawa and Qianru Li and Harrison W. Gabel and Ahmed Elewa and Bridget Baumgartner and Debra J. Rose and Haiyuan Yu and Stephanie Bosak and Reynaldo Sequerra and Andrew Fraser and Susan E. Mango and William M. Saxton and Susan Strome and Sander van den Heuvel and Fabio Piano and Jean Vandenhaute and Claude Sardet and Mark Gerstein and Lynn Doucette-Stamm and Kristin C. Gunsalus and J. Wade Harper and Michael E. Cusick and Frederick P. Roth and David E. Hill and Marc Vidal
Science (American Association for the Advancement of Science), ISSN 0036-8075, 1/2004, Volume 303, Issue 5657, pp. 540 - 543
Datasets | Transcriptomes | Yeasts | Drug interactions | Genes | Reports | Open reading frames | Protein interaction mapping | Pharynx | Worms | Medical schools | Science & Technology - Other Topics | Multidisciplinary Sciences | Science & Technology | Fundamental and applied biological sciences. Psychology | Biological and medical sciences | Intermolecular phenomena | Interactions. Associations | Molecular biophysics | Caenorhabditis elegans - metabolism | Caenorhabditis elegans - genetics | Genomics | Open Reading Frames | Computational Biology | Genes, Helminth | Caenorhabditis elegans Proteins - metabolism | Two-Hybrid System Techniques | Phenotype | Animals | Protein Binding | Transcription, Genetic | Caenorhabditis elegans Proteins - genetics | Proteome - metabolism | Evolution, Molecular | Cell interaction | Protein metabolism | Genetic aspects | Chemical properties | Research | Proteins | Bacteria | Models | Microbiology | proteomics | protein-protein interactions | Index Medicus | Life Sciences | Biochemistry, Molecular Biology
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5. Full Text A Protein–Protein Interaction Network for Human Inherited Ataxias and Disorders of Purkinje Cell Degeneration
by Lim, Janghoo and Hao, Tong and Shaw, Chad and Patel, Akash J and Szabó, Gábor and Rual, Jean-François and Fisk, C. Joseph and Li, Ning and Smolyar, Alex and Hill, David E and Barabási, Albert-László and Vidal, Marc and Zoghbi, Huda Y
Cell (Cambridge), ISSN 0092-8674, 2006, Volume 125, Issue 4, pp. 801 - 814
Biochemistry & Molecular Biology | Life Sciences & Biomedicine | Science & Technology | Cell Biology | Neurodegenerative Diseases - pathology | Humans | Computational Biology | Molecular Sequence Data | Neurodegenerative Diseases - genetics | Proteome | Neurodegenerative Diseases - metabolism | Nerve Tissue Proteins - genetics | Purkinje Cells - physiology | Nerve Tissue Proteins - metabolism | Two-Hybrid System Techniques | Animals | Databases, Protein | Mutation | Ataxia - genetics | Ataxia - metabolism | Purkinje Cells - pathology | Ataxia - pathology | Evolution, Molecular | Genetic research | Genetic aspects | Research | Yeast fungi | Purkinje cells | Cerebellar ataxia | Proteins | Physiological aspects | Neurosciences | Analysis | Index Medicus
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6. Full Text An experimentally derived confidence score for binary protein-protein interactions
by Hill, David E and Cusick, Michael E and Pawson, Tony and Rual, Jean-François and Braun, Pascal and Dreze, Matija and Vidal, Marc and Roncari, Luba and Vandenhaute, Jean and Roth, Frederick P and Lemmens, Irma and Tasan, Murat and Wrana, Jeffrey L and Murray, Ryan R and de Smet, Anne-Sophie and Tavernier, Jan and Barrios-Rodiles, Miriam and Sahalie, Julie M and Yu, Haiyuan and Venkatesan, Kavitha
Nature methods, ISSN 1548-7091, 01/2009, Volume 6, Issue 1, pp. 91 - 97
Biochemistry & Molecular Biology | Life Sciences & Biomedicine | Biochemical Research Methods | Science & Technology | Protein Interaction Mapping - methods | Animals | Proteins - metabolism | Humans | Sensitivity and Specificity | Protein Binding | Proteins - analysis | Protein microarrays | Evaluation | Usage | Mass spectrometry | Analysis | Protein-protein interactions | Biomedical research | Research methodology | Standards | Proteomics | Quality control | Index Medicus
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7. Full Text SH3 interactome conserves general function over specific form
by Xin, Xiaofeng and Gfeller, David and Cheng, Jackie and Tonikian, Raffi and Sun, Lin and Guo, Ailan and Lopez, Lianet and Pavlenco, Alevtina and Akintobi, Adenrele and Zhang, Yingnan and Rual, Jean‐François and Currell, Bridget and Seshagiri, Somasekar and Hao, Tong and Yang, Xinping and Shen, Yun A and Salehi‐Ashtiani, Kourosh and Li, Jingjing and Cheng, Aaron T and Bouamalay, Dryden and Lugari, Adrien and Hill, David E and Grimes, Mark L and Drubin, David G and Grant, Barth D and Vidal, Marc and Boone, Charles and Sidhu, Sachdev S and Bader, Gary D
Molecular systems biology, ISSN 1744-4292, 2013, Volume 9, Issue 1, pp. 1DUMMY - n/a
SH3 domains | yeast two‐hybrid | phage display | network evolution | protein interaction conservation | yeast two-hybrid | Life Sciences & Biomedicine | Biochemistry & Molecular Biology | Science & Technology | Amino Acid Sequence | Caenorhabditis elegans - metabolism | Caenorhabditis elegans - genetics | Saccharomyces cerevisiae - genetics | Caenorhabditis elegans Proteins - metabolism | Molecular Sequence Data | src Homology Domains - genetics | Saccharomyces cerevisiae Proteins - genetics | Protein Interaction Mapping | Saccharomyces cerevisiae - metabolism | Two-Hybrid System Techniques | Animals | Saccharomyces cerevisiae Proteins - metabolism | Conserved Sequence | Endocytosis - genetics | Structural Homology, Protein | Caenorhabditis elegans Proteins - genetics | Evolution, Molecular | Yeasts | Baking yeast | Peptides | Phages | Cloning | Homology | Organisms | Biological activity | Proteins | Domains | Phage display | Endocytosis | Scientific imaging | Localization | Protein interaction | Mass spectrometry | Index Medicus
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8. Full Text RBPJ/CBF1 interacts with L3MBTL3/MBT1 to promote repression of Notch signaling via histone demethylase KDM1A/LSD1
by Xu, Tao and Park, Sung‐Soo and Giaimo, Benedetto Daniele and Hall, Daniel and Ferrante, Francesca and Ho, Diana M and Hori, Kazuya and Anhezini, Lucas and Ertl, Iris and Bartkuhn, Marek and Zhang, Honglai and Milon, Eléna and Ha, Kimberly and Conlon, Kevin P and Kuick, Rork and Govindarajoo, Brandon and Zhang, Yang and Sun, Yuqing and Dou, Yali and Basrur, Venkatesha and Elenitoba‐Johnson, Kojo SJ and Nesvizhskii, Alexey I and Ceron, Julian and Lee, Cheng‐Yu and Borggrefe, Tilman and Kovall, Rhett A and Rual, Jean‐François
The EMBO journal, ISSN 0261-4189, 11/2017, Volume 36, Issue 21, pp. 3232 - 3249
L3MBTL3 | KDM1A | RBPJ | Notch signaling | Biochemistry & Molecular Biology | Life Sciences & Biomedicine | Science & Technology | Cell Biology | Receptors, Notch - metabolism | Humans | Receptors, Notch - genetics | Drosophila Proteins - metabolism | Drosophila melanogaster - genetics | Histone Demethylases - genetics | DNA-Binding Proteins - metabolism | Drosophila melanogaster - metabolism | Neuroglia - cytology | Conserved Sequence | Protein Domains | Transcription, Genetic | Immunoglobulin J Recombination Signal Sequence-Binding Protein - genetics | Immunoglobulin J Recombination Signal Sequence-Binding Protein - metabolism | Caenorhabditis elegans - metabolism | Caenorhabditis elegans - genetics | Gene Expression Regulation | DNA-Binding Proteins - genetics | Biological Evolution | Histone Demethylases - metabolism | Two-Hybrid System Techniques | Animals | Histones - genetics | Cell Line, Tumor | Protein Binding | Neuroglia - metabolism | Drosophila Proteins - genetics | Histones - metabolism | Binding | Genes | Switches | Homology | Gene expression | Nuclei | Gene silencing | Signal transduction | Demethylation | Signaling | Enhancers | Insects | Lysine | Nematodes | Fruit flies | Evolution | Notch protein | Intracellular | Index Medicus | Signal Transduction | Transcription
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