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1. Full Text 623 – Ser-287, an Investigational Microbiome Therapeutic, Induces Widespread Transcriptional Changes Related to Clinical Remission in a Placebo-Controlled, Double-Blind Randomized Trial (Seres-101) in Patients with Active Mild-To-Moderate Ulcerative Colitis
by Diao, Liyang and Nnamani, Mauris C and OBrien, Edward and Desjardins, Christopher and Martinez, Asuncion and Simmons, Sheri and Litcofsky, Kevin and McGovern, Babara and Weigand, Sherry and Cook, David and Wortman, Jennifer R and Henn, Matthew R
Gastroenterology, ISSN 0016-5085, 05/2019, Volume 156, Issue 6, pp. S-130 - S-130
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2. Full Text A Catalog of Reference Genomes from the Human Microbiome
by Nelson, Karen E and Weinstock, George M and Highlander, Sarah K and Worley, Kim C and Creasy, Heather Huot and Wortman, Jennifer Russo and Rusch, Douglas B and Mitreva, Makedonka and Sodergren, Erica and Chinwalla, Asif T and Feldgarden, Michael and Gevers, Dirk and Haas, Brian J and Madupu, Ramana and Ward, Doyle V and Birren, Bruce W and Gibbs, Richard A and Methe, Barbara and Petrosino, Joseph F and Strausberg, Robert L and Sutton, Granger G and White, Owen R and Wilson, Richard K and Durkin, Scott and Giglio, Michelle Gwinn and Gujja, Sharvari and Howarth, Clint and Kodira, Chinnappa D and Kyrpides, Nikos and Mehta, Teena and Muzny, Donna M and Pearson, Matthew and Pepin, Kymberlie and Pati, Amrita and Qin, Xiang and Yandava, Chandri and Zeng, Qiandong and Zhang, Lan and Berlin, Aaron M and Chen, Lei and Hepburn, Theresa A and Johnson, Justin and McCorrison, Jamison and Miller, Jason and Minx, Pat and Nusbaum, Chad and Russ, Carsten and Sykes, Sean M and Tomlinson, Chad M and Young, Sarah and Warren, Wesley C and Badger, Jonathan and Crabtree, Jonathan and Markowitz, Victor M and Orvis, Joshua and Cree, Andrew and Ferriera, Steve and Fulton, Lucinda L and Fulton, Robert S and Gillis, Marcus and Hemphill, Lisa D and Joshi, Vandita and Kovar, Christie and Torralba, Manolito and Wetterstrand, Kris A and Abouellleil, Amr and Wollam, Aye M and Buhay, Christian J and Ding, Yan and Dugan, Shannon and FitzGerald, Michael G and Holder, Mike and Hostetler, Jessica and Clifton, Sandra W and Allen-Vercoe, Emma and Earl, Ashlee M and Farmer, Candace N and Liolios, Konstantinos and Surette, Michael G and Russo Wortman, Jennifer and Xu, Qiang and Pohl, Craig and Wilczek-Boney, Katarzyna and Zhu, Dianhui and Human Microbiome Jumpstart and Human Microbiome Jumpstart Reference Strains Consortium and The Human Microbiome Jumpstart Reference Strains Consortium and Joint Genome Institute (JGI)
Science, ISSN 0036-8075, 5/2010, Volume 328, Issue 5981, pp. 994 - 999
The human microbiome refers to the community of microorganisms, including prokaryotes, viruses, and microbial eukaryotes, that populate the human body. The... 
Datasets | Metagenomics | Species diversity | Microbiota | RESEARCH ARTICLE | Funding | Humans | Bacteria | Genomes | Sequencing | Scaffolds | GUT MICROBIOME | MULTIDISCIPLINARY SCIENCES | PAN-GENOME | Genes, Bacterial | Genome, Bacterial | Skin - microbiology | Peptides - chemistry | Genome, Archaeal | Bacterial Proteins - chemistry | Bacterial Proteins - genetics | Computational Biology | Metagenomics - methods | Peptides - genetics | Urogenital System - microbiology | Databases, Genetic | Gastrointestinal Tract - microbiology | Metagenomics - standards | Sequence Analysis, DNA - standards | Respiratory System - microbiology | Phylogeny | Biodiversity | Bacteria - genetics | Genetic Variation | Metagenome - genetics | Mouth - microbiology | Bacteria - classification | Microorganisms | Microbiology | Human body | Genomics
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3. Full Text Genomic insights into the Ixodes scapularis tick vector of Lyme disease
by Gulia-Nuss, Monika and Nuss, Andrew B and Meyer, Jason M and Sonenshine, Daniel E and Roe, R. Michael and Waterhouse, Robert M and Sattelle, David B and De La Fuente, José and Ribeiro, Jose M and Megy, Karine and Thimmapuram, Jyothi and Miller, Jason R and Walenz, Brian P and Koren, Sergey and Hostetler, Jessica B and Thiagarajan, Mathangi and Joardar, Vinita S and Hannick, Linda I and Bidwell, Shelby and Hammond, Martin P and Young, Sarah and Zeng, Qiandong and Abrudan, Jenica L and Almeida, Francisca C and Ayllón, Nieves and Bhide, Ketaki and Bissinger, Brooke W and Bonzon-Kulichenko, Elena and Buckingham, Steven D and Caffrey, Daniel R and Caimano, Melissa J and Croset, Vincent and Driscoll, Timothy and Gilbert, Don and Gillespie, Joseph J and Giraldo-Calderón, Gloria I and Grabowski, Jeffrey M and Jiang, David and Khalil, Sayed M.S and Kim, Donghun and Kocan, Katherine M and Koči, Juraj and Kuhn, Richard J and Kurtti, Timothy J and Lees, Kristin and Lang, Emma G and Kennedy, Ryan C and Kwon, Hyeogsun and Perera, Rushika and Qi, Yumin and Radolf, Justin D and Sakamoto, Joyce M and Sánchez-Gracia, Alejandro and Severo, Maiara S and Silverman, Neal and Šimo, Ladislav and Tojo, Marta and Tornador, Cristian and Van Zee, Janice P and Vázquez, Jesús and Vieira, Filipe G and Villar, Margarita and Wespiser, Adam R and Yang, Yunlong and Zhu, Jiwei and Arensburger, Peter and Pietrantonio, Patricia V and Barker, Stephen C and Shao, Renfu and Zdobnov, Evgeny M and Hauser, Frank and Grimmelikhuijzen, Cornelis J.P and Park, Yoonseong and Rozas, Julio and Benton, Richard and Pedra, Joao H.F and Nelson, David R and Unger, Maria F and Tubio, Jose M.C and Tu, Zhijian and Robertson, Hugh M and Shumway, Martin and Sutton, Granger and Wortman, Jennifer R and Lawson, Daniel and Wikel, Stephen K and Nene, Vishvanath M and Fraser, Claire M and Collins, Frank H and Birren, Bruce and Nelson, Karen E and Caler, Elisabet and Hill, Catherine A
Nature Communications, ISSN 2041-1723, 02/2016, Volume 7, Issue 1, p. 10507
Ticks transmit more pathogens to humans and animals than any other arthropod. We describe the 2.1 Gbp nuclear genome of the tick, Ixodes scapularis (Say),... 
ORGANIZATION | RESPONSES | PROTEIN | HEME | GENE | SEQUENCES | EVOLUTIONARY ANALYSES | PATHWAY | MULTIDISCIPLINARY SCIENCES | ANAPLASMA-PHAGOCYTOPHILUM INFECTION | CATTLE TICK | Anaplasma phagocytophilum | Ixodes - genetics | Animals | Genomics | Ligand-Gated Ion Channels - genetics | Xenopus laevis | Genome - genetics | Arachnid Vectors - genetics | Gene Expression Profiling | Lyme Disease - transmission | Oocytes
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4. Full Text Structure, function and diversity of the healthy human microbiome
by Huttenhower, Curtis and Gevers, Dirk and Knight, Rob and Abubucker, Sahar and Badger, Jonathan H and Chinwalla, Asif T and Creasy, Heather H and Earl, Ashlee M and Fitzgerald, Michael G and Fulton, Robert S and Giglio, Michelle G and Hallsworth-Pepin, Kymberlie and Lobos, Elizabeth A and Madupu, Ramana and Magrini, Vincent and Martin, John C and Mitreva, Makedonka and Muzny, Donna M and Sodergren, Erica J and Versalovic, James and Wollam, Aye M and Worley, Kim C and Wortman, Jennifer R and Young, Sarah K and Zeng, Qiandong and Aagaard, Kjersti M and Abolude, Olukemi O and Allen-Vercoe, Emma and Alm, Eric J and Alvarado, Lucia and Andersen, Gary L and Anderson, Scott and Appelbaum, Elizabeth and Arachchi, Harindra M and Armitage, Gary and Arze, Cesar A and Ayvaz, Tulin and Baker, Carl C and Begg, Lisa and Belachew, Tsegahiwot and Bhonagiri, Veena and Bihan, Monika and Blaser, Martin J and Bloom, Toby and Bonazzi, Vivien and Paul Brooks, J and Buck, Gregory A and Buhay, Christian J and Busam, Dana A and Campbell, Joseph L and Canon, Shane R and Cantarel, Brandi L and Chain, Patrick S. G and Chen, I-Min A and Chen, Lei and Chhibba, Shaila and Chu, Ken and Ciulla, Dawn M and Clemente, Jose C and Clifton, Sandra W and Conlan, Sean and Crabtree, Jonathan and Cutting, Mary A and Davidovics, Noam J and Davis, Catherine C and Desantis, Todd Z and Deal, Carolyn and Delehaunty, Kimberley D and Dewhirst, Floyd E and Deych, Elena and Ding, Yan and Dooling, David J and Dugan, Shannon P and Michael Dunne, Wm and Scott Durkin, A and Edgar, Robert C and Erlich, Rachel L and Farmer, Candace N and Farrell, Ruth M and Faust, Karoline and Feldgarden, Michael and Felix, Victor M and Fisher, Sheila and Fodor, Anthony A and Forney, Larry J and Foster, Leslie and Di Francesco, Valentina and Friedman, Jonathan and Friedrich, Dennis C and Fronick, Catrina C and Fulton, Lucinda L and Gao, Hongyu and Garcia, Nathalia and Giannoukos, Georgia and Giblin, Christina and Giovanni, Maria Y and Goldberg, Jonathan M and Goll, Johannes and Gonzalez, Antonio and Griggs, Allison and ... and Human Microbiome Project Consortiu and Human Microbiome Project Consortium and The Human Microbiome Project Consortium and Joint Genome Institute (JGI)
Nature, ISSN 0028-0836, 06/2012, Volume 486, Issue 7402, pp. 207 - 214
Studies of the human microbiome have revealed that even healthy individuals differ remarkably in the microbes that occupy habitats such as the gut, skin and... 
IDENTIFICATION | BACTERIA | MULTIDISCIPLINARY SCIENCES | Metagenomics | Health | Humans | Male | Biodiversity | Bacteria - genetics | Young Adult | Phenotype | Ecosystem | Adolescent | Bacteria - classification | RNA, Ribosomal, 16S - genetics | Adult | Female | Metabolic Networks and Pathways - physiology | Metagenome | Microbiota (Symbiotic organisms) | Research | Biological diversity | Microbiology | Disease | Habitats | Taxonomy | Data processing | Skin | Life sciences | Genomes
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5. Full Text Genome Sequence of Aedes aegypti, a Major Arbovirus Vector
by Vishvanath Nene and Jennifer R. Wortman and Daniel Lawson and Brian Haas and Chinnappa Kodira and Zhijian (Jake) Tu and Brendan Loftus and Zhiyong Xi and Karyn Megy and Manfred Grabherr and Quinghu Ren and Evgeny M. Zdobnov and Neil F. Lobo and Kathryn S. Campbell and Susan E. Brown and Maria F. Bonaldo and Jingsong Zhu and Steven P. Sinkins and David G. Hogenkamp and Paolo Amedeo and Peter Arensburger and Peter W. Atkinson and Shelby Bidwell and Jim Biedler and Ewan Birney and Robert V. Bruggner and Javier Costas and Monique R. Coy and Jonathan Crabtree and Matt Crawford and Becky deBruyn and David DeCaprio and Karin Eiglmeier and Eric Eisenstadt and Hamza El-Dorry and William M. Gelbart and Suely L. Gomes and Martin Hammond and Linda I. Hannick and James R. Hogan and Michael H. Holmes and David Jaffe and J. Spencer Johnston and Ryan C. Kennedy and Hean Koo and Saul Kravitz and Evgenia V. Kriventseva and David Kulp and Kurt LaButti and Eduardo Lee and Song Li and Diane D. Lovin and Chunhong Mao and Evan Mauceli and Carlos F. M. Menck and Jason R. Miller and Philip Montgomery and Akio Mori and Ana L. Nascimento and Horacio F. Naveira and Chad Nusbaum and Sinéad O'Leary and Joshua Orvis and Mihaela Pertea and Hadi Quesneville and Kyanne R. Reidenbach and Yu-Hui Rogers and Charles W. Roth and Jennifer R. Schneider and Michael Schatz and Martin Shumway and Mario Stanke and Eric O. Stinson and Jose M. C. Tubio and Janice P. VanZee and Sergio Verjovski-Almeida and Doreen Werner and Owen White and Stefan Wyder and Qiandong Zeng and Qi Zhao and Yongmei Zhao and Catherine A. Hill and Alexander S. Raikhel and Marcelo B. Soares and Dennis L. Knudson and Norman H. Lee and James Galagan and Steven L. Salzberg and Ian T. Paulsen and George Dimopoulos and Frank H. Collins and Bruce Birren and Claire M. Fraser-Liggett and David W. Severson
Science, ISSN 0036-8075, 6/2007, Volume 316, Issue 5832, pp. 1718 - 1723
We present a draft sequence of the genome of Aedes aegypti, the primary vector for yellow fever and dengue fever, which at ∼1376 million base pairs is about 5... 
Transposons | Genetic vectors | Introns | Genes | DNA | Genomes | Insect vectors | Chromosomes | Insect genetics | Mosquitos | Research Article | ORGANIZATION | EVOLUTION | YELLOW-FEVER MOSQUITO | DROSOPHILA-MELANOGASTER | MULTIDISCIPLINARY SCIENCES | SUPERFAMILY | INSECTS | ANOPHELES-GAMBIAE | RECEPTORS | EXPRESSION | TRANSPOSONS | Anopheles - metabolism | Multigene Family | Species Specificity | Anopheles - genetics | Humans | Synteny | Molecular Sequence Data | Male | Drosophila melanogaster - genetics | Insect Vectors - metabolism | Yellow Fever - transmission | Aedes - metabolism | Sex Determination Processes | Membrane Transport Proteins - genetics | Base Sequence | Female | Transcription, Genetic | Genome, Insect | Genes, Insect | Yellow Fever - prevention & control | Insect Proteins - genetics | Arboviruses | Protein Structure, Tertiary - genetics | Sex Characteristics | Aedes - genetics | Sequence Analysis, DNA | DNA Transposable Elements | Dengue - prevention & control | Animals | Insect Vectors - genetics | Dengue - transmission | Physiological aspects | Aedes albopictus | Genetic aspects | Health aspects | Aedes | Comparative studies | Viruses | Disease transmission | Insects | Epidemiology | Genomics | Life Sciences | Anopheles gambiae | Protein Structure, Tertiary | Insect Vectors | Dengue | Biochemistry, Molecular Biology | Sex Determination (Genetics) | Membrane Transport Proteins | Yellow Fever | Drosophila melanogaster | Insect Proteins
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6. Full Text A framework for human microbiome research
by Methé, Barbara A and Nelson, Karen E and Pop, Mihai and Creasy, Heather H and Giglio, Michelle G and Huttenhower, Curtis and Gevers, Dirk and Petrosino, Joseph F and Abubucker, Sahar and Badger, Jonathan H and Chinwalla, Asif T and Earl, Ashlee M and Fitzgerald, Michael G and Fulton, Robert S and Hallsworth-Pepin, Kymberlie and Lobos, Elizabeth A and Madupu, Ramana and Magrini, Vincent and Martin, John C and Mitreva, Makedonka and Muzny, Donna M and Sodergren, Erica J and Versalovic, James and Wollam, Aye M and Worley, Kim C and Wortman, Jennifer R and Young, Sarah K and Zeng, Qiandong and Aagaard, Kjersti M and Abolude, Olukemi O and Allen-Vercoe, Emma and Alm, Eric J and Alvarado, Lucia and Andersen, Gary L and Anderson, Scott and Appelbaum, Elizabeth and Arachchi, Harindra M and Armitage, Gary and Arze, Cesar A and Ayvaz, Tulin and Baker, Carl C and Begg, Lisa and Belachew, Tsegahiwot and Bhonagiri, Veena and Bihan, Monika and Blaser, Martin J and Bloom, Toby and Bonazzi, Vivien R and Brooks, Paul and Buck, Gregory A and Buhay, Christian J and Busam, Dana A and Campbell, Joseph L and Canon, Shane R and Cantarel, Brandi L and Chain, Patrick S and Chen, I-Min A and Chen, Lei and Chhibba, Shaila and Chu, Ken and Ciulla, Dawn M and Clemente, Jose C and Clifton, Sandra W and Conlan, Sean and Crabtree, Jonathan and Cutting, Mary A and Davidovics, Noam J and Davis, Catherine C and Desantis, Todd Z and Deal, Carolyn and Delehaunty, Kimberley D and Dewhirst, Floyd E and Deych, Elena and Ding, Yan and Dooling, David J and Dugan, Shannon P and Michael Dunne, W and Scott Durkin, A and Edgar, Robert C and Erlich, Rachel L and Farmer, Candace N and Farrell, Ruth M and Faust, Karoline and Feldgarden, Michael and Felix, Victor M and Fisher, Sheila and Fodor, Anthony A and Forney, Larry and Foster, Leslie and Di Francesco, Valentina and Friedman, Jonathan and Friedrich, Dennis C and Fronick, Catrina C and Fulton, Lucinda L and Gao, Hongyu and Garcia, Nathalia and Giannoukos, Georgia and Giblin, Christina and Giovanni, Maria Y and Goldberg, Jonathan M and ... and Human Microbiome Project Consortiu and Human Microbiome Project Consortium and The Human Microbiome Project Consortium and Joint Genome Institute (JGI)
Nature, ISSN 0028-0836, 06/2012, Volume 486, Issue 7402, pp. 215 - 221
A variety of microbial communities and their genes (the microbiome) exist throughout the human body, with fundamental roles in human health and disease. The... 
MULTIDISCIPLINARY SCIENCES | CATALOG | Young Adult | Reference Standards | Humans | Adolescent | Metagenomics - methods | RNA, Ribosomal, 16S - genetics | Adult | Female | Male | Statistics as Topic | Bacteria - genetics | Metagenome | Genetic research | Microbiological research | Genomes | Research | Microbiota (Symbiotic organisms) | Studies | Medicine | Microbiology | Publications | Taxonomy | Genomics | Data processing | Manuscripts
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