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Journal Article
Journal Article
by Thorsson, Vesteinn and Thorsson, Vésteinn and Gibbs, Richard A and Gibbs, David L and Brown, Scott D and Wolf, Gregory and Wolf, Denise and Bortone, Dante S and Ou Yang, Tai-Hsien and Porta-Pardo, Eduard and Gao, Galen F and Gao, Jianjiong and Plaisier, Christopher L and Eddy, James A and Ziv, Elad and Culhane, Aedin C and Paull, Evan O and Sivakumar, I.K. Ashok and Gentles, Andrew J and Malhotra, Raunaq and Farshidfar, Farshad and Colaprico, Antonio and Parker, Joel S and Mose, Lisle E and Vo, Nam Sy and Liu, Wenbin and Liu, Jianfang and Liu, Jia and Liu, Yuexin and Liu, Xiuping and Rader, Janet and Dhankani, Varsha and Reynolds, Sheila and Reynolds, Sheila M and Bowlby, Reanne and Califano, Andrea and Cherniack, Andrew D and Anastassiou, Dimitris and Bedognetti, Davide and Mokrab, Younes and Newman, Aaron M and Rao, Arvind and Chen, Amy and Chen, Chu and Chen, Ken and Krasnitz, Alexander and Hu, Jianhong and Hu, Hai and Malta, Tathiane M and Noushmehr, Houtan and Pedamallu, Chandra Sekhar and Bullman, Susan and Ojesina, Akinyemi I and Lamb, Andrew and Zhou, Wanding and Shen, Hui and Choueiri, Toni K and Weinstein, John N and Guinney, Justin and Saltz, Joel and Holt, Robert and Holt, Robert A and Rabkin, Charles S and Caesar-Johnson, Samantha J and Demchok, John A and Felau, Ina and Kasapi, Melpomeni and Ferguson, Martin L and Hutter, Carolyn M and Sofia, Heidi J and Tarnuzzer, Roy and Wang, Jioajiao and Wang, Min and Wang, Linghua and Wang, Zhining and Wang, Timothy and Wang, Jing and Yang, Ju Dong and Yang, Hannah and Yang, Liming and Yang, Ian and Zenklusen, Jean C and Zhang, Jiashan (Julia) and Zhang, Jiexin and Zhang, Lizhi and Zhang, Wei and Zhang, Hongzheng and Zhang, Hailei and Zhang, Hongxin and Chudamani, Sudha and Lolla, Laxmi and Naresh, Rashi and Pihl, Todd and Sun, Yichao and Sun, Qiang and Wan, Yunhu and Wu, Ye and Cho, Juok and DeFreitas, Timothy and Frazer, Scott and ... and Canc Genome Atlas Res Network and Cancer Genome Atlas Research Network
Immunity, ISSN 1074-7613, 04/2018, Volume 48, Issue 4, pp. 812 - 830.e14
We performed an extensive immunogenomic analysis of more than 10,000 tumors comprising 33 diverse cancer types by utilizing data compiled by TCGA. Across... 
tumor immunology | immunotherapy | cancer genomics | integrative network analysis | immuno-oncology | tumor microenvironment | immune subtypes | immunomodulatory | GENOMIC ANALYSES | INFORMATION | T-CELL-RECEPTOR | REGULATORY NETWORK | CLASSIFICATION | IMMUNOLOGY | SEQUENCING DATA | SOMATIC MUTATIONS | COMPREHENSIVE ANALYSIS | PREDICTION | REVEALS | Transforming Growth Factor beta - immunology | Prognosis | Humans | Middle Aged | Th1-Th2 Balance - physiology | Male | Neoplasms - classification | Wound Healing - immunology | Young Adult | Transforming Growth Factor beta - genetics | Neoplasms - genetics | Neoplasms - immunology | Interferon-gamma - immunology | Adolescent | Aged, 80 and over | Adult | Female | Aged | Interferon-gamma - genetics | Wound Healing - genetics | Genomics - methods | Child | Macrophages - immunology | Cell proliferation | Cluster analysis | Transcription | Copy number | p53 Protein | Lung cancer | Genomics | Aneuploidy | Lymphocytes T | Genomes | Cell interactions | Macrophages | Immunotherapy | DNA methylation | Deoxyribonucleic acid--DNA | Immune system | Medical research | Wound healing | Immunomodulation | MiRNA | Stockholders | Inflammation | T cell receptors | Communications networks | Gene expression | White blood cells | Inventors | Medical prognosis | γ-Interferon | Mutation | Cancer | Tumors | Immune Subtypes | Integrative Network Analysis | Cancer Genomics | Immuno-oncology | Tumor immunology
Journal Article
by Richards, Stephen and Gibbs, Richard A and Weinstock, George M and Brown, Susan J and Denell, Robin and Beeman, Richard W and Gibbs, Richard and Bucher, Gregor and Friedrich, Markus and Grimmelikhuijzen, Cornelis J. P and Klingler, Martin and Lorenzen, Marce and Roth, Siegfried and Schröder, Reinhard and Tautz, Diethard and Zdobnov, Evgeny M and Muzny, Donna and Attaway, Tony and Bell, Stephanie and Buhay, Christian J and Chandrabose, Mimi N and Chavez, Dean and Clerk-Blankenburg, Kerstin P and Cree, Andrew and Dao, Marvin and Davis, Clay and Chacko, Joseph and Dinh, Huyen and Dugan-Rocha, Shannon and Fowler, Gerald and Garner, Toni T and Garnes, Jeffrey and Gnirke, Andreas and Hawes, Alica and Hernandez, Judith and Hines, Sandra and Holder, Michael and Hume, Jennifer and Jhangiani, Shalini N and Joshi, Vandita and Khan, Ziad Mohid and Jackson, Laronda and Kovar, Christie and Kowis, Andrea and Lee, Sandra and Lewis, Lora R and Margolis, Jon and Morgan, Margaret and Nazareth, Lynne V and Nguyen, Ngoc and Okwuonu, Geoffrey and Parker, David and Ruiz, San-Juana and Santibanez, Jireh and Savard, Joël and Scherer, Steven E and Schneider, Brian and Sodergren, Erica and Vattahil, Selina and Villasana, Donna and White, Courtney S and Wright, Rita and Park, Yoonseong and Lord, Jeff and Oppert, Brenda and Wang, Liangjiang and Weinstock, George and Liu, Yue and Worley, Kim and Elsik, Christine G and Reese, Justin T and Elhaik, Eran and Landan, Giddy and Graur, Dan and Arensburger, Peter and Atkinson, Peter and Beidler, Jim and Demuth, Jeffery P and Drury, Douglas W and Du, Yu-Zhou and Fujiwara, Haruhiko and Maselli, Vincenza and Osanai, Mizuko and Robertson, Hugh M and Tu, Zhijian and Wang, Jian-Jun and Wang, Suzhi and Song, Henry and Zhang, Lan and Werner, Doreen and Stanke, Mario and Morgenstern, Burkhard and Solovyev, Victor and Kosarev, Peter and Brown, Garth and Chen, Hsiu-Chuan and Ermolaeva, Olga and Hlavina, Wratko and Kapustin, Yuri and Kiryutin, Boris and ... and Tribolium Genome Sequencing Consortium and Medicinska fakulteten and Umeå centrum för molekylär patogenes (UCMP) (Medicinska fakulteten) and Umeå universitet
Nature, ISSN 0028-0836, 04/2008, Volume 452, Issue 7190, pp. 949 - 955
Tribolium castaneum is a member of the most species-rich eukaryotic order, a powerful model organism for the study of generalized insect development, and an... 
SHORT-GERM INSECT | RED FLOUR BEETLE | GENE SUPERFAMILY | BOMBYX-MORI | PROTEIN | APIS-MELLIFERA | MESSENGER-RNA | DROSOPHILA-MELANOGASTER | MULTIDISCIPLINARY SCIENCES | SEGMENTATION | HONEY-BEE | Proteome - genetics | Genes, Insect - genetics | Humans | Phylogeny | Neurotransmitter Agents - genetics | RNA Interference | DNA Transposable Elements - genetics | Tribolium - physiology | Taste - genetics | Telomere - genetics | Insecticides - pharmacology | Repetitive Sequences, Nucleic Acid - genetics | Tribolium - classification | Genome, Insect - genetics | Oogenesis - genetics | Vision, Ocular - genetics | Animals | Base Composition | Tribolium - embryology | Receptors, Odorant - genetics | Cytochrome P-450 Enzyme System - genetics | Tribolium - genetics | Receptors, G-Protein-Coupled - genetics | Growth and Development - genetics | Body Patterning - genetics | Physiological aspects | Genetic aspects | Research | Nucleotide sequencing | Gene expression | Methods | Flour beetles | Evolutionary biology | Insects | Genes | Genomics | Genetics | RNA polymerase | Chemicals | Index Medicus | Genes; Insect/genetics | Tribolium/classification/embryology/genetics/physiology | Receptors; G-Protein-Coupled/genetics | Genome; Insect/genetics | Cytochrome P-450 Enzyme System/genetics | Telomere/genetics | DNA Transposable Elements/genetics | Repetitive Sequences; Nucleic Acid/genetics | Receptors; Odorant/genetics | Body Patterning/genetics | Neurotransmitter Agents/genetics | Growth and Development/genetics | Vision/genetics | Insecticides/pharmacology | Proteome/genetics | Oogenesis/genetics | Taste/genetics
Journal Article