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1. Full Text An Aboriginal Australian Genome Reveals Separate Human Dispersals into Asia
by Morten Rasmussen and Xiaosen Guo and Yong Wang and Kirk E. Lohmueller and Simon Rasmussen and Anders Albrechtsen and Line Skotte and Stinus Lindgreen and Mait Metspalu and Thibaut Jombart and Toomas Kivisild and Weiwei Zhai and Anders Eriksson and Andrea Manica and Ludovic Orlando and Francisco M. De La Vega and Silvana Tridico and Ene Metspalu and Kasper Nielsen and María C. Ávila-Arcos and J. Víctor Moreno-Mayar and Craig Muller and Joe Dortch and M. Thomas P. Gilbert and Ole Lund and Agata Wesolowska and Monika Karmin and Lucy A. Weinert and Bo Wang and Jun Li and Shuaishuai Tai and Fei Xiao and Tsunehiko Hanihara and George van Driem and Aashish R. Jha and François-Xavier Ricaut and Peter de Knijff and Andrea B Migliano and Irene Gallego Romero and Karsten Kristiansen and David M. Lambert and Søren Brunak and Peter Forster and Bernd Brinkmann and Olaf Nehlich and Michael Bunce and Michael Richards and Ramneek Gupta and Carlos D. Bustamante and Anders Krogh and Robert A. Foley and Marta M. Lahr and Francois Balloux and Thomas Sicheritz-Pontén and Richard Villems and Rasmus Nielsen and Jun Wang and Eske Willerslev
Science (American Association for the Advancement of Science), ISSN 0036-8075, 10/2011, Volume 334, Issue 6052, pp. 94 - 98
Gene flow | Highlands | Aboriginal Australians | Genomics | REPORTS | Alleles | Admixtures | Genomes | Modeling | We they distinction | Asians | Science & Technology - Other Topics | Multidisciplinary Sciences | Science & Technology | Fundamental and applied biological sciences. Psychology | Classical genetics, quantitative genetics, hybrids | Human | Biological and medical sciences | Genetics of eukaryotes. Biological and molecular evolution | Haplotypes | Western Australia | Humans | Asian Continental Ancestry Group - genetics | Male | Phylogeny | Hominidae - genetics | DNA, Mitochondrial - genetics | Ethnic Groups - genetics | Computer Simulation | Far East | Oceanic Ancestry Group - genetics | European Continental Ancestry Group - genetics | Gene Flow | Gene Frequency | Sequence Analysis, DNA | Linkage Disequilibrium | Animals | Genetics, Population - methods | Asia | Polymorphism, Single Nucleotide | Genome, Mitochondrial | African Continental Ancestry Group | Genome, Human | Emigration and Immigration | Physiological aspects | Australian aborigines | Genetic aspects | Research | Nucleotide sequencing | Population genetics | Human genetics | DNA sequencing | Mobility | Native peoples | Dispersal | Contamination | Index Medicus | Populations and Evolution | DNA, Mitochondrial | Humanities and Social Sciences | Life Sciences | Ethnic Groups | Biological anthropology | Genetics | Hominidae | Oceanic Ancestry Group | Genetics, Population | European Continental Ancestry Group | Asian Continental Ancestry Group
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2. Full Text Whole-genome resequencing of experimental populations reveals polygenic basis of egg-size variation in drosophila melanogaster
by Jha, Aashish R and Miles, Cecelia M and Lippert, Nodia R and Brown, Christopher D and White, Kevin P and Kreitman, Martin
Molecular biology and evolution, ISSN 0737-4038, 10/2015, Volume 32, Issue 10, pp. 2616 - 2632
pooled sequencing | experimental evolution | polygenic adaptation | egg size | adaptation | complex traits | evolution | Biochemistry & Molecular Biology | Genetics & Heredity | Life Sciences & Biomedicine | Evolutionary Biology | Science & Technology | Multifactorial Inheritance - genetics | Gene Frequency - genetics | Genetic Association Studies | Drosophila melanogaster - cytology | Gene Expression Regulation | Cell Size | Male | Directed Molecular Evolution | Drosophila melanogaster - genetics | Genetic Variation | Ovum - cytology | Phenotype | Animals | Female | Genome, Insect | Sequence Analysis, DNA - methods | Gene Ontology | Crosses, Genetic | Genomes | Biological variation | Genomics | Genes | Generalized linear models | Polymorphism | Index Medicus | Discoveries
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3. Full Text Shared genetic signals of hypoxia adaptation in drosophila and in high-altitude human populations
by Jha, Aashish R and Zhou, Dan and Brown, Christopher D and Kreitman, Martin and Haddad, Gabriel G and White, Kevin P
Molecular biology and evolution, ISSN 0737-4038, 02/2016, Volume 33, Issue 2, pp. 501 - 517
hypoxia | pooled sequencing | high-altitude adaptation | experimental evolution | adaptation | complex traits | evolve and resequence | evolution | polygenic traits | Biochemistry & Molecular Biology | Genetics & Heredity | Life Sciences & Biomedicine | Evolutionary Biology | Science & Technology | Genetic Association Studies | Adaptation, Biological - genetics | Drosophila | Gene Frequency | Humans | Selection, Genetic | Gene Knockdown Techniques | Biological Evolution | Hypoxia - genetics | Phenotype | Animals | Polymorphism, Single Nucleotide | Altitude | Genetics | Hypoxia | Insects | Genes | Adaptation | Polymorphism | Index Medicus | Discoveries
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4. Full Text Tim-3 marks human natural killer cell maturation and suppresses cell-mediated cytotoxicity
by Ndhlovu, Lishomwa C and Lopez-Vergès, Sandra and Barbour, Jason D and Brad Jones, R and Jha, Aashish R and Long, Brian R and Schoeffler, Eric C and Fujita, Tsuyoshi and Nixon, Douglas F and Lanier, Lewis L
Blood, ISSN 0006-4971, 04/2012, Volume 119, Issue 16, pp. 3734 - 3743
Hematologic and hematopoietic diseases | Biological and medical sciences | Medical sciences | Biomarkers - metabolism | T-Lymphocytes, Cytotoxic - immunology | CD56 Antigen - metabolism | Cell Line | GPI-Linked Proteins - immunology | Humans | Immunophenotyping | Membrane Proteins - immunology | Receptors, IgG - immunology | Hepatitis A Virus Cellular Receptor 2 | GPI-Linked Proteins - metabolism | Lymphocyte Subsets - immunology | Receptors, IgG - metabolism | Cross-Linking Reagents - metabolism | Cell Differentiation - immunology | Killer Cells, Natural - cytology | Lymphocyte Subsets - metabolism | Up-Regulation - immunology | Killer Cells, Natural - immunology | Ligands | Membrane Proteins - metabolism | CD56 Antigen - immunology | T-Lymphocytes, Cytotoxic - cytology | Index Medicus | Abridged Index Medicus | Immunobiology
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5. Full Text miR-9a Minimizes the Phenotypic Impact of Genomic Diversity by Buffering a Transcription Factor
by Cassidy, Justin J and Jha, Aashish R and Posadas, Diana M and Giri, Ritika and Venken, Koen J.T and Ji, Jingran and Jiang, Hongmei and Bellen, Hugo J and White, Kevin P and Carthew, Richard W
Cell (Cambridge), ISSN 0092-8674, 12/2013, Volume 155, Issue 7, pp. 1556 - 1567
Biochemistry & Molecular Biology | Life Sciences & Biomedicine | Science & Technology | Cell Biology | Drosophila melanogaster - metabolism | Genetic Variation | Transcription Factors - metabolism | Animals | Female | Male | MicroRNAs - metabolism | Nuclear Proteins - metabolism | Genome, Insect | Drosophila Proteins - metabolism | Gene Regulatory Networks | Drosophila melanogaster - genetics | MicroRNA | Gene expression | Developmental biology | Analysis | Genes | Genomics | Index Medicus
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6. Full Text Pilferage from opaque food subsidy programs: Theory and evidence
by Mehta, Aashish and Jha, Shikha
Food policy, ISSN 0306-9192, 04/2014, Volume 45, pp. 69 - 79
Transparency | Corruption | Transfer program | Targeting | Philippines | Opacity | Food subsidy | Pilferage | Economics | Social Sciences | Life Sciences & Biomedicine | Nutrition & Dietetics | Food Science & Technology | Business & Economics | Agriculture | Agricultural Economics & Policy | Science & Technology | Subsidies | Recall | Sampling | Quotas | Food | Rice | Allocations | Policies | Communities | Recall errors | Mathematical models | Foods | Subsidies (financial)
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7. Full Text Tim-3 expression defines a novel population of dysfunctional T cells with highly elevated frequencies in progressive HIV-1 infection
by Jones, R. Brad and Ndhlovu, Lishomwa C and Barbour, Jason D and Sheth, Prameet M and Jha, Aashish R and Long, Brian R and Wong, Jessica C and Satkunarajah, Malathy and Schweneker, Marc and Chapman, Joan M and Gyenes, Gabor and Vali, Bahareh and Hyrcza, Martin D and Yue, Feng Yun and Kovacs, Colin and Sassi, Aref and Loutfy, Mona and Halpenny, Roberta and Persad, Desmond and Spotts, Gerald and Hecht, Frederick M and Chun, Tae-Wook and McCune, Joseph M and Kaul, Rupert and Rini, James M and Nixon, Douglas F and Ostrowski, Mario A
The Journal of experimental medicine, ISSN 0022-1007, 11/2008, Volume 205, Issue 12, pp. 2763 - 2779
Immunology | Life Sciences & Biomedicine | Medicine, Research & Experimental | Science & Technology | Research & Experimental Medicine | GATA3 Transcription Factor - genetics | T-Lymphocyte Subsets - immunology | Antigens, CD - immunology | HIV-1 - pathogenicity | T-Lymphocyte Subsets - cytology | GATA3 Transcription Factor - immunology | Humans | STAT5 Transcription Factor - immunology | T-Box Domain Proteins - immunology | Antigens, CD - genetics | Extracellular Signal-Regulated MAP Kinases - genetics | Extracellular Signal-Regulated MAP Kinases - immunology | HIV Infections - immunology | STAT5 Transcription Factor - genetics | Signal Transduction - immunology | HIV Infections - pathology | Apoptosis Regulatory Proteins - genetics | Apoptosis Regulatory Proteins - immunology | Membrane Proteins - genetics | p38 Mitogen-Activated Protein Kinases - genetics | Membrane Proteins - immunology | p38 Mitogen-Activated Protein Kinases - immunology | Hepatitis A Virus Cellular Receptor 2 | T-Box Domain Proteins - genetics | Disease Progression | Antiretroviral Therapy, Highly Active | HIV-1 - immunology | Phenotype | Animals | T-Lymphocytes - cytology | HIV Infections - drug therapy | Programmed Cell Death 1 Receptor | T-Lymphocytes - immunology | HIV Infections - physiopathology | HLA Antigens | Index Medicus
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8. Full Text Global diversity, population stratification, and selection of human copy-number variation
by Sudmant, Peter H and Mallick, Swapan and Nelson, Bradley J and Hormozdiari, Fereydoun and Krumm, Niklas and Huddleston, John and Coe, Bradley P and Baker, Carl and Nordenfelt, Susanne and Bamshad, Michael and Jorde, Lynn B and Posukh, Olga L and Sahakyan, Hovhannes and Watkins, W. Scott and Yepiskoposyan, Levon and Abdullah, M. Syafiq and Bravi, Claudio M and Capelli, Cristian and Hervig, Tor and Wee, Joseph T. S and Tyler-Smith, Chris and Van Driem, George and Romero, Irene Gallego and Jha, Aashish R and Karachanak-Yankova, Sena and Toncheva, Draga and Comas, David and Henn, Brenna and Kivisild, Toomas and Ruiz-Linares, Andres and Sajantila, Antti and Metspalu, Ene and Parik, Jüri and Villems, Richard and Starikovskaya, Elena B and Ayodo, George and Beall, Cynthia M and Di Rienzo, Anna and Hammer, Michael F and Khusainova, Rita and Khusnutdinova, Elza and Klitz, William and Winkler, Cheryl and Labuda, Damian and Metspalu, Mait and Tishkoff, Sarah A and Dryomov, Stanislav and Sukernik, Rem and Patterson, Nick and Reich, David and Eichler, Evan E
Science (American Association for the Advancement of Science), ISSN 0036-8075, 09/2015, Volume 349, Issue 6253, pp. aab3761 - aab3761
Science & Technology - Other Topics | Multidisciplinary Sciences | Science & Technology | Gene Duplication | African Continental Ancestry Group - classification | Sequence Deletion | Humans | Selection, Genetic | Oceanic Ancestry Group - classification | Phylogeny | Hominidae - genetics | Genome, Human - genetics | DNA Copy Number Variations | Animals | Polymorphism, Single Nucleotide | African Continental Ancestry Group - genetics | Oceanic Ancestry Group - genetics | Population - genetics | Evolution, Molecular | Population genetics | Genomics | Genetic diversity | Index Medicus | Reproduction | Genes | Deletion | Genetics | Genomes | High frequencies | Signatures | Loci | Polimorfisme genètic | Duplicació cromosòmica | Evolució molecular | Genoma humà
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9. Full Text Gut microbiome transition across a lifestyle gradient in Himalaya
by Jha, Aashish R and Jha, Aashish R and Davenport, Emily R and Gautam, Yoshina and Bhandari, Dinesh and Bhandari, Dinesh and Tandukar, Sarmila and Tandukar, Sarmila and Ng, Katharine M and Ng, Katharine M and Fragiadakis, Gabriela K and Holmes, Susan and Gautam, Guru Prasad and Leach, Jeff and Leach, Jeff and Sherchand, Jeevan Bahadur and Sherchand, Jeevan Bahadur and Bustamante, Carlos D and Bustamante, Carlos D and Sonnenburg, Justin L and Sonnenburg, Justin L
PLoS biology, ISSN 1544-9173, 11/2018, Volume 16, Issue 11, pp. e2005396 - e2005396
Biochemistry & Molecular Biology | Biology | Life Sciences & Biomedicine - Other Topics | Life Sciences & Biomedicine | Science & Technology | Environmental aspects | Physiological aspects | Microbiota (Symbiotic organisms) | Indigenous peoples | Geography | Drinking water | Divergence | Cooking | Populations | Arsenic | Laboratories | Funding | Communities | Microbiomes | Population genetics | Microorganisms | Immunology | Dependence | Genetics | Bacteria | Intestinal microflora | Bioinformatics | Public health | Supervision | Medical research | Composition | Hunting | Environmental factors | Diet | Software | Lifestyles | Harbors | Farming | Reconfiguration | Index Medicus
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