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Nucleic acids research, ISSN 0305-1048, 09/2015, Volume 43, Issue 20, pp. 9626 - 9644
DNA G-hairpins are potential key structures participating in folding of human telomeric guanine quadruplexes (GQ). We examined their properties by standard MD... 
Life Sciences & Biomedicine | Biochemistry & Molecular Biology | Science & Technology | Telomere - chemistry | DNA - chemistry | Cations - chemistry | Humans | Oxytricha - genetics | G-Quadruplexes | Molecular Dynamics Simulation | Index Medicus | Computational Biology
Journal Article
Biochimica et biophysica acta. General subjects, ISSN 0304-4165, 05/2017, Volume 1861, Issue 5, pp. 1246 - 1263
Journal Article
The journal of physical chemistry. B, ISSN 1520-6106, 03/2015, Volume 119, Issue 11, pp. 4220 - 4229
X-ray crystallography can provide important insights into the structure of RNA enzymes (ribozymes). However, the details of a ribozyme’s active site... 
Protons | Catalytic Domain | DNA - chemistry | Quantum Theory | RNA, Catalytic - metabolism | Phosphates - chemistry | Crystallography, X-Ray | Ribose - chemistry | DNA - metabolism | RNA, Catalytic - chemistry | Molecular Dynamics Simulation | Index Medicus
Journal Article
The journal of physical chemistry letters, ISSN 1948-7185, 05/2014, Volume 5, Issue 10, pp. 1771 - 1782
We present a brief overview of explicit solvent molecular dynamics (MD) simulations of nucleic acids. We explain physical chemistry limitations of the... 
Physical Sciences | Chemistry | Materials Science | Nanoscience & Nanotechnology | Technology | Materials Science, Multidisciplinary | Science & Technology - Other Topics | Physics, Atomic, Molecular & Chemical | Chemistry, Physical | Physics | Science & Technology
Journal Article
Journal of chemical theory and computation, ISSN 1549-9618, 09/2016, Volume 12, Issue 9, pp. 4534 - 4548
Journal Article
The journal of physical chemistry. B, ISSN 1520-6106, 08/2012, Volume 116, Issue 33, pp. 9899 - 9916
We have carried out an extended reference set of explicit solvent molecular dynamics simulations (63 simulations wi