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1. Cancer stem cells: Lessons learned from the leukemic stem cells
by Kandilci, Ayten
Turkish Journal of Biology, ISSN 1300-0152, 2016, Volume 40, Issue 5, pp. 1012 - 1017
Cancer is the second cause of death in Turkey and the frequency of cancer deaths increased from 12% in 2002 to 21% in 2009 (Ozkan et al., 2013). To win the war... 
Cancer stem cells | Leukemia | Leukemic stem cells | leukemia | leukemic stem cells | SELF-RENEWAL | ACUTE MYELOID-LEUKEMIA | IDENTIFICATION | OVEREXPRESSION | IN-VIVO | BIOLOGY | MYELOGENOUS LEUKEMIA | RESISTANCE | DIFFERENTIATION | EXPRESSION | HIERARCHY
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2. Full Text DEK protein level is a biomarker of CD138positive normal and malignant plasma cells
by Çalışkaner, Zihni Onur and Çakar, Türkan and Özçelik, Emrah and Özdilek, Ahmet and Kim, Annette S and Doğan, Öner and Bosompem, Amma and Grosveld, Gerard and Saka, Bülent and Kandilci, Ayten
PloS one, ISSN 1932-6203, 2017, Volume 12, Issue 5, p. e0178025
Overexpression of DEK oncogene is associated with increased proliferation of carcinoma cells and it is observed in several solid tumors due to the... 
Biomarkers - metabolism | Cell Line | Oncogene Proteins - genetics | Cell Proliferation | Syndecan-1 - metabolism | Chromosomal Proteins, Non-Histone - metabolism | Humans | RNA, Messenger - genetics | Oncogene Proteins - metabolism | Multiple Myeloma - metabolism | Chromosomal Proteins, Non-Histone - genetics | Poly-ADP-Ribose Binding Proteins | Multiple Myeloma - pathology | Cell Line, Tumor | Plasma Cells - metabolism | Disease detection | Blood | Proteins | Urinary bladder | Mathematical analysis | Bone marrow | Genetics | Diagnosis | Inhibition | Probes | Deoxyribonucleic acid--DNA | Medical research | Bortezomib | Melanoma | Crosslinking | Gene expression | Patients | Burkitt's lymphoma | Amplification | Pathology | Chemotherapy | Lymphomas | Aberration | Acute myeloid leukemia | Biotechnology | Animal models | Senescence | Microbiology | Leukemia | Colorectal carcinoma | Multiple myeloma | Antibodies | Fluorescence | Malignancy | Biology | DNA repair | Immunology | Cell cycle | Bones | Mathematical models | Children | Tumor cells | Myeloid leukemia | Breast cancer | Ribonucleic acid--RNA | Lymphoma | Medicine | Lymphocytes B | Cell death | Medical prognosis | Molecular biology | Differentiation | Tumors | Cancer | Plasmas (physics) | B-cell lymphoma | RNA | Deoxyribonucleic acid | Ribonucleic acid | DNA
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3. Analysis of the effect of DEK overexpression on the survival and proliferation of bone marrow stromal cells
by Cakar, T and Kandilci, A
TURKISH JOURNAL OF BIOCHEMISTRY-TURK BIYOKIMYA DERGISI, ISSN 0250-4685, 08/2019, Volume 44, Issue 4, pp. 510 - 516
Objective: DEK is ubiquitously expressed and encodes a nuclear protein, which is also released from some cells. Overexpression of DEK suppresses proliferation... 
U266 cells | PROTEIN | CHROMATIN | BIOCHEMISTRY & MOLECULAR BIOLOGY | Multiple myeloma | DEK | IDENTIFICATION | MESENCHYMAL STEM-CELLS | RPMI-8226 cells | HS27A cells | INVASION | Stromal cells | DNA | TARGETS
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4. Full Text Mapping of MN1 Sequences Necessary for Myeloid Transformation
by Kandilci, Ayten and Surtel, Jacqueline and Janke, Laura and Neale, Geoffrey and Terranova, Sabrina and Grosveld, Gerard C
PLoS ONE, ISSN 1932-6203, 04/2013, Volume 8, Issue 4, p. e61706
The MN1 oncogene is deregulated in human acute myeloid leukemia and its overexpression induces proliferation and represses myeloid differentiation of primitive... 
OVEREXPRESSION | ONCOGENE | DEFECTS | PROTEIN | FUSION | GENE | MULTIDISCIPLINARY SCIENCES | LEUKEMIA | MN1-TEL | TRANSCRIPTION FACTOR | EXPRESSION | Oncogene Proteins - genetics | Sequence Deletion | Cell Proliferation | Cell Count | Humans | Leukemia, Myeloid, Acute - metabolism | Gene Expression Regulation, Neoplastic | Molecular Sequence Data | Gene Expression Profiling | Neoplasm Proteins - metabolism | Neoplastic Stem Cells - metabolism | Retroviridae - genetics | Cell Transformation, Neoplastic - genetics | Neoplastic Stem Cells - pathology | Cell Differentiation | Neoplasm Proteins - genetics | Amino Acid Sequence | Transduction, Genetic | Leukemia, Myeloid, Acute - pathology | Bone Marrow Cells - pathology | Oncogene Proteins - metabolism | Cell Transformation, Neoplastic - metabolism | Leukemia, Myeloid, Acute - mortality | Animals | Survival Analysis | Myeloid Cells - metabolism | Mice | Myeloid Cells - pathology | Cell Transformation, Neoplastic - pathology | Genetic Vectors | Bone Marrow Cells - metabolism | Leukemia, Myeloid, Acute - genetics | Cell proliferation | Transformation | Animal models | Deregulation | Transcription factors | Leukemia | Genes | Amino acids | Lymphocytes T | Gene deletion | Proteins | Clonal deletion | Bone marrow | Deletion | Genetics | Bioinformatics | Cbfa-1 protein | Enzymes | Myeloid leukemia | Gene expression | Mutants | Hemopoiesis | Medical prognosis | Molecular biology | Laboratory animals | Differentiation | Acute myeloid leukemia | Hemorrhagic thrombocythemia
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5. Full Text DEK protein level is a biomarker of CD138.sup.positive normal and malignant plasma cells
by Caliskaner, Zihni Onur and Cakar, Turkan and Ozcelik, Emrah and Ozdilek, Ahmet and Kim, Annette S and Dogan, Oner and Bosompem, Amma and Grosveld, Gerard and Saka, Bulent and Kandilci, Ayten
PLoS ONE, ISSN 1932-6203, 05/2017, Volume 12, Issue 5, p. e0178025
Carcinoma | Physiological aspects | Development and progression | Genetic aspects | Research | Oncogenes | Cancer
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6. Full Text Reintroduction of CEBPA in MN1-overexpressing hematopoietic cells prevents their hyperproliferation and restores myeloid differentiation
by Kandilci, Ayten and Grosveld, Gerard C
Blood, ISSN 0006-4971, 2009, Volume 114, Issue 8, pp. 1596 - 1606
Forced expression of MN1 in primitive mouse hematopoietic cells causes acute myeloid leukemia and impairs all-trans retinoic acid-induced granulocytic... 
TRANSCRIPTION FACTORS | LINEAGE COMMITMENT | PROGENITOR CELLS | MN1 | FACTOR-C/EBP-ALPHA | MEDIATED TRANSCRIPTION | ACUTE MYELOGENOUS LEUKEMIA | GENE-EXPRESSION | SELF-RENEWAL | ETS FACTOR TEL2 | HEMATOLOGY | Hematopoietic Stem Cells - drug effects | Tumor Suppressor Proteins - metabolism | Cell Proliferation | Humans | Myeloid Cells - physiology | Cells, Cultured | Hematopoietic Stem Cells - metabolism | Cell Differentiation - genetics | Animals | Transfection | Cell Differentiation - drug effects | U937 Cells | CCAAT-Enhancer-Binding Proteins - physiology | Tumor Suppressor Proteins - genetics | HL-60 Cells | Hematopoietic Stem Cells - physiology | Myeloid Cells - metabolism | Myeloid Cells - drug effects | Mice | CCAAT-Enhancer-Binding Proteins - genetics | Cholecalciferol - pharmacology | Tretinoin - pharmacology | Myeloid Neoplasia
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7. Full Text The heme biosynthetic pathway plays a crucial role in N-MYC myeloid leukemias
by Fukuda, Yu and Wang, Yao and Nagai, Shinjiro and Fanshawe, Bruce and Kandilci, Ayten and Zindy, Frederique and Janke, Laura and Neale, Geoff and Fan, Yiping and Sorrentino, Brian and Roussel, Martine and Grosveld, Gerard and Schuetz, John
Experimental Hematology, ISSN 0301-472X, 2015, Volume 43, Issue 9, pp. S63 - S63
Hematology, Oncology and Palliative Medicine | Advanced Basic Science | Heme
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8. Full Text Overexpression of N-Myc rapidly causes acute myeloid leukemia in mice
by Kawagoe, Hiroyuki and Kandilci, Ayten and Kranenburg, Tanya A and Grosveld, Gerard C
Cancer Research, ISSN 0008-5472, 11/2007, Volume 67, Issue 22, pp. 10677 - 10685
N-MYC encodes a basic helix-loop-helix/leucine zipper (bHLH/ LZ) transcription factor that is frequently overexpressed in human neuroblastoma. N-MYC... 
TRANSFORMATION | B-CELL LYMPHOMA | DNA-BINDING | JUN | ONCOGENE | AMPLIFICATION | ONCOLOGY | MOUSE MODEL | C-MYC | TUMOR | EXPRESSION | Protein Structure, Tertiary | Cell Proliferation | Oligonucleotide Array Sequence Analysis | Signal Transduction | Cell Separation | Leukemia, Myeloid, Acute - pathology | Leukemia, Myeloid, Acute - metabolism | JNK Mitogen-Activated Protein Kinases - metabolism | Gene Expression Regulation, Leukemic | Proto-Oncogene Proteins c-myc - biosynthesis | Animals | Cell Transformation, Neoplastic | Myeloid Cells - metabolism | Mice | Transforming Growth Factor beta - metabolism | Bone Marrow Cells - metabolism
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9. Full Text Abstract 4301: Deletion-mapping identifies the regions within MN1 that regulates its transforming activity in hematopoietic cells
by Kandilci, Ayten and Bonten, Jacqueline and Janke, Laura and Neal, Geoffrey and Terranova, Sabrina and Grosveld, Gerard
Cancer Research, ISSN 0008-5472, 04/2011, Volume 71, Issue 8 Supplement, pp. 4301 - 4301
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10. Full Text Differing DNA Methylation Patterns and Gene Mutation Frequencies in Colorectal Carcinomas from Middle Eastern Countries
by Annie O. Chan and Amr S. Soliman and Qing Zhang and Asif Rashid and Ahmed Bedeir and P. Scott Houlihan and Nadia Mokhtar and Nidal Al-Masri and Ugur Ozbek and Rami Yaghan and Ayten Kandilci and Sherif Omar and Yersu Kapran and Ferhunde Dizdaroglu and Melissa L. Bondy and Christopher I. Amos and Jean-Pierre Issa and Bernard Levin and Stanley R. Hamilton
Clinical Cancer Research, ISSN 1078-0432, 12/2005, Volume 11, Issue 23, pp. 8281 - 8287
Purpose: The epidemiology of colorectal carcinoma is well known to differ among countries but the molecular characteristics are usually assumed to be similar.... 
microsatellite instability | ras | methylation | Colorectal cancer | p53 | CELL LUNG-CANCER | P53 MUTATIONS | RISK-FACTORS | CPG ISLAND METHYLATION | ONCOLOGY | MICROSATELLITE INSTABILITY | PHENOTYPE | COLON TUMORS | ENVIRONMENTAL EXPOSURES | DIETARY-INTAKE | AGE | Carcinoma, Medullary - epidemiology | MutL Protein Homolog 1 | Genes, p16 - physiology | Colorectal Neoplasms - genetics | Humans | Middle Aged | Male | Egypt - epidemiology | Adenocarcinoma, Mucinous - epidemiology | Carcinoma, Signet Ring Cell - genetics | DNA Methylation | Jordan - epidemiology | Aged, 80 and over | Adult | Female | Nuclear Proteins - genetics | Child | Chromosomal Instability | Microsatellite Repeats | Genes, ras - genetics | Colorectal Neoplasms - epidemiology | Signal Transduction | Carcinoma, Medullary - genetics | Gene Frequency | Genes, p53 - genetics | Mutation - genetics | Carcinoma, Signet Ring Cell - epidemiology | Carrier Proteins - genetics | Adaptor Proteins, Signal Transducing | Phenotype | Turkey - epidemiology | Adolescent | CpG Islands - genetics | Aged | Adenocarcinoma, Mucinous - genetics | DNA, Neoplasm - genetics
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11. Overexpression of N-Myc Rapidly Causes Acute Myeloid Leukemia in Mice
by Kawagoe, Hiroyuki and Kandilci, Ayten and Kranenburg, Tanya A and Grosveld, Gerard C
Cancer Research, ISSN 0008-5472, 11/2007, Volume 67, Issue 22, pp. 10677 - 10685
N-MYC encodes a basic helix-loop-helix/leucine zipper (bHLH/LZ) transcription factor that is frequently overexpressed in human neuroblastoma. N-MYC... 
Journal Article
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12. Full Text Positive Normal and malignant plasma cells
by Caliskaner, Zihni Onur and Cakar, Türkan and Özçelik, Emrah and Özdilek, Ahmet and Kim, Annette S and Dogan, Öner and Bosompem, Amma and Grosveld, Gerard and Saka, Bülent and Kandilci, Ayten
PLoS ONE, 05/2017, Volume 12, Issue 5
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13. Full Text The Novel ETS Factor TEL2 Cooperates with Myc in B Lymphomagenesis
by Monica Cardone and Ayten Kandilci and Cintia Carella and Jonas A. Nilsson and Jennifer A. Brennan and Sema Sirma and Ugur Ozbek and Kelli Boyd and John L. Cleveland and Gerard C. Grosveld and Umeå universitet and Teknisk-naturvetenskapliga fakulteten and Institutionen för molekylärbiologi (Teknisk-naturvetenskaplig fakultet)
Molecular and Cellular Biology, ISSN 0270-7306, 03/2005, Volume 25, Issue 6, pp. 2395 - 2405
Article Usage Stats Services MCB Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley... 
BCL-X-L | APOPTOSIS | GENE | BIOCHEMISTRY & MOLECULAR BIOLOGY | ACUTE LYMPHOBLASTIC-LEUKEMIA | BONE-MARROW | TUMOR-SUPPRESSOR | COMPARATIVE GENOMIC HYBRIDIZATION | EXPRESSION | TRANSCRIPTIONAL REPRESSOR | TRANSGENIC MICE | CELL BIOLOGY | Cell Proliferation | Humans | Burkitt Lymphoma - metabolism | Male | Mice, Transgenic | Up-Regulation - genetics | Transcription Factors - genetics | DNA-Binding Proteins - genetics | Mutation - genetics | Proto-Oncogene Proteins c-myc - metabolism | Tumor Suppressor Protein p53 - genetics | DNA-Binding Proteins - metabolism | Transcription Factors - metabolism | Animals | Burkitt Lymphoma - genetics | Female | Mice | Child | B-Lymphocytes - metabolism | Proto-Oncogene Proteins c-ets | Apoptosis | Suppression, Genetic | Mammalian Genetic Models with Minimal or Complex Phenotypes | Transcription Factors/genetics/metabolism | DNA-Binding Proteins/genetics/metabolism | Mice; Transgenic | Mutation/genetics | B-Lymphocytes/metabolism | Proto-Oncogene Proteins c-myc/metabolism | Tumor Suppressor Protein p53/genetics | Leukemia; B-Cell; Acute/genetics/metabolism | Suppression; Genetic | Burkitt Lymphoma/genetics/metabolism | Up-Regulation/genetics
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14. Full Text High MN1 expression increases the in vitro clonogenic activity of primary mouse B-cells
by Numata, Masashi and Yener, Mehmet Deniz and Ekmekçi, Sema Sırma and Aydın, Müge and Grosveld, Gerard and Cardone, Monica and Terranova, Sabrina and Geltink, Ramon Klein and Özbek, Uğur and Özçelik, Emrah and Güleç, Çağrı and Anak, Sema and Karaman, Serap and Öztürk, Gülyüz and Akbıyık, Meral and Kandilci, Ayten
Leukemia Research, ISSN 0145-2126, 2015, Volume 39, Issue 8, pp. 906 - 912
Highlights • MN1 expression is significantly increased in TEL–AML1+ B-ALL patients bone marrow. • MN1 and AML1 expression show significant correlation in B-ALL... 
Hematology, Oncology and Palliative Medicine | MN1 | ALL | TEL–AML1 | AML1 | TEL-AML1 | AML | FUSION | ACUTE MYELOID-LEUKEMIA | CANCER | OVEREXPRESSION | ONCOGENE | GENE | ONCOLOGY | ACUTE LYMPHOBLASTIC-LEUKEMIA | HEMATOLOGY | Precursor B-Cell Lymphoblastic Leukemia-Lymphoma - pathology | Humans | Mice, Inbred C57BL | Cells, Cultured | B-Lymphocytes - physiology | Bone Marrow Cells - physiology | Child, Preschool | Infant | Male | Hematopoietic Stem Cells - metabolism | Gene Expression Regulation, Leukemic | Case-Control Studies | Precursor B-Cell Lymphoblastic Leukemia-Lymphoma - genetics | Young Adult | Animals | Tumor Suppressor Proteins - genetics | Adolescent | Hematopoietic Stem Cells - physiology | Female | Colony-Forming Units Assay | Mice | Primary Cell Culture | Child | Bone Marrow Cells - metabolism | B cells
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15. Full Text SET-CAN, the Product of the t(9;9) in Acute Undifferentiated Leukemia, Causes Expansion of Early Hematopoietic Progenitors and Hyperproliferation of Stomach Mucosa in Transgenic Mice
by Özbek, Ugur and Kandilci, Ayten and van Baal, Sjozef and Bonten, Jacqueline and Boyd, Kelli and Franken, Patrick and Fodde, Riccardo and Grosveld, Gerard C
American Journal of Pathology, The, ISSN 0002-9440, 2007, Volume 171, Issue 2, pp. 654 - 666
Leukemia-specific chromosome translocations involving the nucleoporin CAN/NUP214 lead to expression of different fusion genes including DEK-CAN , CAN-ABL , and... 
Pathology | STEM-CELLS | ACUTE NONLYMPHOCYTIC LEUKEMIA | MOUSE STOMACH | IN-VIVO | ACUTE MYELOID-LEUKEMIA | PATHOLOGY | BETA-CATENIN | PROTEIN SET | IDENTIFICATION | EXPRESSION | NUCLEOCYTOPLASMIC TRANSPORT | Immunohistochemistry | Translocation, Genetic | Leukemia - blood | Cell Proliferation | Leukemia - pathology | Chromosomes, Mammalian - genetics | Humans | Hyperplasia | Hematopoietic Stem Cells - pathology | Gastric Mucosa - pathology | Male | Gastric Mucosa - metabolism | Nuclear Pore Complex Proteins - genetics | Flow Cytometry | Female | Colony-Forming Units Assay | Gastric Mucosa - chemistry | Leukemia - genetics | Lymphocytes - metabolism | Cell Line | Acute Disease | Mice, Transgenic | Hematopoietic Stem Cells - metabolism | Reverse Transcriptase Polymerase Chain Reaction | Chromosomal Proteins, Non-Histone - genetics | Lymphocytes - pathology | Animals | Ki-67 Antigen - analysis | Oncogene Proteins, Fusion - genetics | Survival Analysis | Mice | Regular
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16. Mapping of MN1 Sequences Necessary for Myeloid Transformation. e61706
by Kandilci, Ayten and Surtel, Jacqueline and Janke, Laura and Neale, Geoffrey and Terranova, Sabrina and Grosveld, Gerard C
PLoS ONE, 04/2013, Volume 8, Issue 4
The MN1 oncogene is deregulated in human acute myeloid leukemia and its overexpression induces proliferation and represses myeloid differentiation of primitive... 
Acute myeloid leukemia
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17. SET oncogene is upregulated in pediatric acute lymphoblastic leukemia
by Ekmekci, Sema Sirma and Ekmekci, Cumhur G and Kandilci, Ayten and Gulec, Cagri and Akbiyik, Meral and Emrence, Zeliha and Abaci, Neslihan and Karakas, Zeynep and Agaoglu, Leyla and Unuvar, Aysegul and Anak, Sema and Devecioglu, Omer and Ustek, Duran and Grosveld, Gerard and Ozbek, Ugur
Tumori, ISSN 0300-8916, 03/2012, Volume 98, Issue 2, pp. 252 - 256
SET over-expression | Pediatric ALL | SET | Acute lymphoblastic leukemia
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18. SET oncogene is upregulated in pediatric acute lymphoblastic leukemia
by Ekmekci, SS and Ekmekci, CG and Kandilci, A and Gulec, C and Akbiyik, M and Emrence, Z and Abaci, N and Karakas, Z and Agaoglu, L and Unuvar, A and Anak, S and Devecioglu, O and Ustek, D and Grosveld, G and Ozbek, U
TUMORI J, ISSN 0300-8916, 03/2012, Volume 98, Issue 2, pp. 252 - 256
Aims and background. The SET gene is a target of chromosomal translocations in acute leukemia and encodes a widely expressed multifunctional phosphoprotein. It... 
SET-NUP214 FUSION | SET overexpression | SET | ONCOLOGY | acute lymphoblastic leukemia | TRANSLOCATION BREAKPOINT | pediatric ALL | ACUTE MYELOID-LEUKEMIA | PROTEIN SET | INHIBITOR | EXPRESSION | Up-Regulation | Histone Chaperones - genetics | Humans | Gene Expression Regulation, Neoplastic | Kaplan-Meier Estimate | Child, Preschool | Histone Chaperones - metabolism | Male | Transcription Factors - genetics | Neoplasm Proteins - metabolism | Reverse Transcriptase Polymerase Chain Reaction | Transcription Factors - metabolism | Disease-Free Survival | Precursor Cell Lymphoblastic Leukemia-Lymphoma - metabolism | Adolescent | Biomarkers, Tumor - metabolism | Female | Biomarkers, Tumor - genetics | Child | Real-Time Polymerase Chain Reaction
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19. The Novel ETS Factor TEL2 Cooperates with Myc in B Lymphomagenesis
by Cardone, Monica and Kandilci, Ayten and Carella, Cintia and Nilsson, Jonas A and Brennan, Jennifer A and Sirma, Sema and Ozbek, Ugur and Boyd, Kelli and Cleveland, John L and Grosveld, Gerard C
Molecular and Cellular Biology, ISSN 0270-7306, 03/2005, Volume 25, Issue 6, pp. 2395 - 2405
The human ETS family gene TEL2/ETV7 is highly homologous to TEL1/ETV6, a frequent target of chromosome translocations in human leukemia and specific solid... 
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20. Full Text Tel2 Cooperates with Myc in B-Cell Lymphomagenesis by Inactivating p53
by Kandilci, Ayten and Carella, Cintia and Nilsson, Jonas A and Brennan, Jennifer A and Boyd, Kelli and Cleveland, John and Sirma, Sema and Ozbek, Ugur
Cancer Biology & Therapy, ISSN 1538-4047, 04/2005, Volume 4, Issue 4, pp. 359 - 364
The genes TEL2 and MYC cooperate with each other to promote pediatric cases of the immune system cancer B-cell lymphoma. This finding, from investigators at... 
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