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by Kim, Min-Sik and Pinto, Sneha M and Getnet, Derese and Nirujogi, Raja Sekhar and Manda, Srikanth S and Chaerkady, Raghothama and Madugundu, Anil K and Kelkar, Dhanashree S and Isserlin, Ruth and Jain, Shobhit and Thomas, Joji K and Muthusamy, Babylakshmi and Leal-Rojas, Pamela and Kumar, Praveen and Sahasrabuddhe, Nandini A and Balakrishnan, Lavanya and Advani, Jayshree and George, Bijesh and Renuse, Santosh and Selvan, Lakshmi Dhevi N and Patil, Arun H and Nanjappa, Vishalakshi and Radhakrishnan, Aneesha and Prasad, Samarjeet and Subbannayya, Tejaswini and Raju, Rajesh and Kumar, Manish and Sreenivasamurthy, Sreelakshmi K and Marimuthu, Arivusudar and Sathe, Gajanan J and Chavan, Sandip and Datta, Keshava K and Subbannayya, Yashwanth and Sahu, Apeksha and Yelamanchi, Soujanya D and Jayaram, Savita and Rajagopalan, Pavithra and Sharma, Jyoti and Murthy, Krishna R and Syed, Nazia and Goel, Renu and Khan, Aafaque A and Ahmad, Sartaj and Dey, Gourav and Mudgal, Keshav and Chatterjee, Aditi and Huang, Tai-Chung and Zhong, Jun and Wu, Xinyan and Shaw, Patrick G and Freed, Donald and Zahari, Muhammad S and Mukherjee, Kanchan K and Shankar, Subramanian and Mahadevan, Anita and Lam, Henry and Mitchell, Christopher J and Shankar, Susarla Krishna and Satishchandra, Parthasarathy and Schroeder, John T and Sirdeshmukh, Ravi and Maitra, Anirban and Leach, Steven D and Drake, Charles G and Halushka, Marc K and Prasad, T. S. Keshava and Hruban, Ralph H and Kerr, Candace L and Bader, Gary D and Iacobuzio-Donahue, Christine A and Gowda, Harsha and Pandey, Akhilesh
Nature, ISSN 0028-0836, 2014, Volume 509, Issue 7502, pp. 575 - 581
Journal Article
Molecular and Cellular Proteomics, ISSN 1535-9476, 05/2017, Volume 16, Issue 5, pp. 891 - 910
Mutations in the Epidermal growth factor receptor (EGFR) kinase domain, such as the L858R missense mutation and deletions spanning the conserved sequence... 
BREAST-CANCER | 1ST-LINE TREATMENT | GEFITINIB | MET AMPLIFICATION | BIOCHEMICAL RESEARCH METHODS | ACQUIRED-RESISTANCE | OPEN-LABEL | ERK ACTIVATION | EXPRESSION | ERLOTINIB | SIGNALING NETWORKS | Lung Neoplasms - drug therapy | Adenocarcinoma - pathology | Adenocarcinoma of Lung | Humans | Lung Neoplasms - metabolism | Lung Neoplasms - pathology | Phosphotyrosine - metabolism | Adenocarcinoma - metabolism | Mass Spectrometry | Biomarkers, Tumor - metabolism | Isotope Labeling | Phosphorylation - drug effects | Proteomics - methods | Reproducibility of Results | ErbB Receptors - antagonists & inhibitors | ErbB Receptors - metabolism | Mutation - genetics | Adenocarcinoma - drug therapy | Tyrosine - metabolism | Afatinib | Signal Transduction - drug effects | Protein Kinase Inhibitors - therapeutic use | Quinazolines - therapeutic use | Erlotinib Hydrochloride - pharmacology | Cell Line, Tumor | Erlotinib Hydrochloride - therapeutic use | Protein Kinase Inhibitors - pharmacology | Quinazolines - pharmacology | Cluster Analysis | Adenocarcinoma | Cell culture | Biotechnology | Phosphorylation | Peptides | Amino acids | Kinases | c-Met protein | Proteins | Conserved sequence | Epidermal growth factor | Missense mutation | Gefitinib | Protein-tyrosine kinase | Sensitizing | Adaptor proteins | Tyrosine | Epidermal growth factor receptors | Mass spectroscopy | Tumor cell lines | Substrates | Signaling | Sensitivity | Inhibitors | Lungs | Cell lines | Biomarkers | Mutation | Mass spectrometry | Research
Journal Article
Cancer Biology & Therapy, ISSN 1538-4047, 09/2011, Volume 12, Issue 6, pp. 510 - 522
Journal Article
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 9/2008, Volume 105, Issue 37, pp. 14112 - 14117
We have used unbiased phosphoproteomic approaches, based on quantitative mass spectrometry using stable isotope labeling with amino acids in cell culture... 
Adenocarcinoma | Phosphorylation | Receptors | Lungs | Epithelial cells | Cell lines | Antibodies | Mass spectroscopy | Genetic mutation | Lung neoplasms | Tyrosine phosphorylation | Proteomics | RECEPTOR GENE-MUTATIONS | GEFITINIB | proteomics | BRONCHIAL EPITHELIAL-CELLS | QUANTITATIVE PROTEOMICS | MULTIDISCIPLINARY SCIENCES | BETA-CATENIN | TRANSCRIPT RELEASE FACTOR | TARGETED THERAPIES | EPIDERMAL-GROWTH-FACTOR | tyrosine phosphorylation | POLYMERASE-I | SIGNALING NETWORKS | Lung Neoplasms - genetics | Proto-Oncogene Proteins - metabolism | Amino Acid Sequence | Receptor, Epidermal Growth Factor - genetics | ras Proteins - genetics | Proto-Oncogene Proteins p21(ras) | Signal Transduction | Endothelial Cells - metabolism | Humans | Lung Neoplasms - metabolism | Cells, Cultured | Gene Expression Regulation, Neoplastic | ras Proteins - metabolism | Proto-Oncogene Proteins - genetics | Mutation - genetics | Receptor, Epidermal Growth Factor - chemistry | Phosphotyrosine - metabolism | Receptor, Epidermal Growth Factor - metabolism | Mass Spectrometry | Alleles | Bronchi - metabolism | Protein Binding | Tyrosine | Lung cancer | Genetic aspects | Research | Properties | Methods | Cell culture | Epidermal growth factor receptors | Transcription | ErbB protein | catenin | Lung | Cell junctions | Amino acids | Tumor cell lines | ErbB-2 protein | Deletion mutant | K-Ras protein | c-Met protein | Signal transduction | E-Cadherin | Protein-tyrosine kinase receptors | Bayesian analysis | Isotopes | Protein-tyrosine kinase | Biological Sciences
Journal Article
Journal Article
Cancer Biology & Therapy, ISSN 1538-4047, 10/2010, Volume 10, Issue 8, pp. 796 - 810
Journal Article
Cancer Biology & Therapy, ISSN 1538-4047, 11/2010, Volume 10, Issue 10, pp. 1009 - 1018
Esophageal adenocarcinoma (EAC) arises in the backdrop of reflux-induced metaplastic phenomenon known as Barrett esophagus. The prognosis of advanced EAC is... 
Binding | Proteins | Landes | Calcium | Bioscience | Biology | Cell | Cycle | Cancer | Organogenesis | Barrett esophagus | SAGE | Axl | Ral GTP | PROLONGS SURVIVAL | ACTIVATION | barrett esophagus | GENE-EXPRESSION PROFILES | CELL-GROWTH | BREAST-CANCER | EFFECTOR | ONCOLOGY | RAL GTPASES | BARRETT-ESOPHAGUS | RESISTANCE | MYELOID-LEUKEMIA | RNA, Small Interfering - genetics | Adenocarcinoma - pathology | Humans | Middle Aged | Male | Immunoenzyme Techniques | Esophageal Neoplasms - pathology | Intercellular Signaling Peptides and Proteins - metabolism | Barrett Esophagus - pathology | ral GTP-Binding Proteins - metabolism | Receptor Protein-Tyrosine Kinases - antagonists & inhibitors | Barrett Esophagus - enzymology | Female | Phosphorylation - drug effects | Proto-Oncogene Proteins - metabolism | Proto-Oncogene Proteins - antagonists & inhibitors | Benzocycloheptenes - pharmacology | Adenocarcinoma - enzymology | Intercellular Signaling Peptides and Proteins - genetics | Proto-Oncogene Proteins - genetics | Survival Rate | Lymphatic Metastasis | Mice, SCID | Receptor Protein-Tyrosine Kinases - metabolism | Adenocarcinoma - drug therapy | ral GTP-Binding Proteins - antagonists & inhibitors | Triazoles - pharmacology | Cell Movement - drug effects | Esophageal Neoplasms - enzymology | Animals | Receptor Protein-Tyrosine Kinases - genetics | Signal Transduction - drug effects | Barrett Esophagus - drug therapy | Mice, Inbred NOD | Aged | Mice | Protein Kinase Inhibitors - pharmacology | ral GTP-Binding Proteins - genetics | Quinazolines - pharmacology | Esophageal Neoplasms - drug therapy | Research Paper
Journal Article
BMC Systems Biology, ISSN 1752-0509, 11/2015, Volume 9, Issue 1, pp. 75 - 75
Journal Article