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science & technology (22) 22
life sciences & biomedicine (20) 20
genetics & heredity (14) 14
genomes (13) 13
deoxyribonucleic acid--dna (8) 8
genomics (8) 8
transposons (7) 7
biotechnology (6) 6
genetics (6) 6
helianthus - genetics (6) 6
chromosomes (5) 5
epigenetics (5) 5
food and beverages (5) 5
gene expression (5) 5
gene sequencing (5) 5
long terminal repeat (5) 5
ltr-retrotransposons (5) 5
repetitive dna (5) 5
agriculture (4) 4
biochemistry & molecular biology (4) 4
biology (4) 4
biotechnology & applied microbiology (4) 4
dna, plant - genetics (4) 4
evolution (4) 4
forestry (4) 4
gene expression regulation, plant (4) 4
genes (4) 4
life sciences (4) 4
nucleotide sequence (4) 4
phylogeny (4) 4
plant sciences (4) 4
plants (4) 4
research article (4) 4
retroelements - genetics (4) 4
species (4) 4
sunflower (4) 4
sunflowers (4) 4
abundance (3) 3
analysis (3) 3
bioinformatics (3) 3
clustering (3) 3
dna sequencing (3) 3
enzymes (3) 3
fungi (3) 3
genes, plant (3) 3
genome structure (3) 3
genome, plant - genetics (3) 3
horticulture (3) 3
multidisciplinary sciences (3) 3
organisms (3) 3
plant breeding/biotechnology (3) 3
plant genetics & genomics (3) 3
poplar (3) 3
retroelements (3) 3
science (3) 3
science & technology - other topics (3) 3
terminal repeat sequences - genetics (3) 3
transcription (3) 3
tree biology (3) 3
coevolution (2) 2
comparative analysis (2) 2
computational biology (2) 2
computer applications (2) 2
copia (2) 2
dna methylation (2) 2
domestication (2) 2
evolution, molecular (2) 2
ficus carica l (2) 2
flowers & plants (2) 2
flowers - genetics (2) 2
genetic transcription (2) 2
genetic variation (2) 2
genome, plant (2) 2
genotypes (2) 2
gypsy (2) 2
haplotypes (2) 2
helianthus (2) 2
helianthus annuus (2) 2
hormones (2) 2
illumina sequencing (2) 2
interspecific (2) 2
life sciences & biomedicine - other topics (2) 2
long terminal repeat retrotransposons (2) 2
medicine (2) 2
nucleotide sequencing (2) 2
organic chemistry (2) 2
phenotype (2) 2
plant domestication (2) 2
plant genetics (2) 2
populus trichocarpa (2) 2
posidonia oceanica (2) 2
research (2) 2
retrotransposon abundance (2) 2
retrotransposon expression (2) 2
retrotransposon transcription (2) 2
ribonucleic acid--rna (2) 2
rna (2) 2
rna sequencing (2) 2
roots (2) 2
seagrasses (2) 2
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1. Full Text Genome-wide analysis of LTR-retrotransposon diversity and its impact on the evolution of the genus Helianthus (L.)
by Mascagni, Flavia and Giordani, Tommaso and Ceccarelli, Marilena and Cavallini, Andrea and Natali, Lucia
BMC genomics, ISSN 1471-2164, 08/2017, Volume 18, Issue 1, pp. 634 - 634
Comparative genomics | Repetitive DNA | LTR-retrotransposons | Plant genome evolution | Annual and perennial habit | Helianthus | Genetics & Heredity | Life Sciences & Biomedicine | Biotechnology & Applied Microbiology | Science & Technology | Genetic Variation | Species Specificity | Genomics | Terminal Repeat Sequences - genetics | Evolution, Molecular | Helianthus - genetics | Retroelements - genetics | Evolution | Genome-wide association studies | Plants | Research | Analysis | Recombination | Divergence | Variability | Biological evolution | Abundance | Interspecific | Genomes | Coevolution | Clustering | Long terminal repeat | Gene sequencing | Ecological genetics | Ecological monitoring | Genetics | Comparative analysis | Species | Chromosomes | Deoxyribonucleic acid--DNA | Speciation | Sunflowers | DNA sequencing | Index Medicus
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2. Full Text Less Is More: Genome Reduction and the Emergence of CooperationImplications into the Coevolution of Microbial Communities
by Bosi, Emanuele and Mascagni, Flavia
International journal of genomics, ISSN 2314-436X, 01/2019, Volume 2019
Biochemistry & Molecular Biology | Life Sciences & Biomedicine | Genetics & Heredity | Biotechnology & Applied Microbiology | Science & Technology
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3. Full Text Different histories of two highly variable LTR retrotransposons in sunflower species
by Mascagni, Flavia and Cavallini, Andrea and Giordani, Tommaso and Natali, Lucia
Gene, ISSN 0378-1119, 11/2017, Volume 634, pp. 5 - 14
Genome variation | Long-terminal-repeat retrotransposon families | Genome evolution | Sunflower | Helianthus | Life Sciences & Biomedicine | Genetics & Heredity | Science & Technology | Genetic Variation | Hybridization, Genetic | Retroelements | Helianthus - classification | Terminal Repeat Sequences | Sequence Analysis, DNA - methods | DNA, Plant - genetics | Evolution, Molecular | Helianthus - genetics | Family | Transposons | Analysis | Genomics | Index Medicus
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4. Full Text Less Is More: Genome Reduction and the Emergence of Cooperation—Implications into the Coevolution of Microbial Communities
by Bosi, Emanuele and Mascagni, Flavia
International journal of genomics, ISSN 2314-436X, 2/2019, Volume 2019, pp. 1 - 5
Genes | Infections | Ecology | Genomes | Organisms | Parasites | Coevolution | Endangered & extinct species | Hypotheses | Microbiota | Plant nectar | Cooperation | Evolution | Genetics | Diabetes | Beneficiaries
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5. Full Text A computational genome-wide analysis of long terminal repeats retrotransposon expression in sunflower roots (Helianthus annuus L.)
by Mascagni, Flavia and Vangelisti, Alberto and Usai, Gabriele and Giordani, Tommaso and Cavallini, Andrea and Natali, Lucia
Genetica, ISSN 0016-6707, 02/2020, Volume 148, Issue 1, pp. 13 - 23
Organic chemistry | Transcription | Roots | Computer applications | Genomes | Hormones | Plantlets | Sodium chloride | Gene expression | Chromosomes | Sunflowers | Structure-function relationships | Index Medicus
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6. Full Text A computational comparative study of the repetitive DNA in the genus Quercus L
by Mascagni, Flavia and Vangelisti, Alberto and Giordani, Tommaso and Cavallini, Andrea and Natali, Lucia
Tree genetics & genomes, ISSN 1614-2942, 02/2020, Volume 16, Issue 1
Geographical distribution | Nucleotide sequence | Abundance | Mapping | Genomes | Clustering | Gene sequencing | Long terminal repeat | Computer applications | Comparative studies | Gene mapping | Species | Deoxyribonucleic acid--DNA
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7. Full Text Specific LTR-retrotransposons show copy number variations between wild and cultivated sunflowers
by Mascagni, Flavia and Vangelisti, Alberto and Giordani, Tommaso and Cavallini, Andrea and Natali, Lucia
Genes, ISSN 2073-4425, 09/2018, Volume 9, Issue 9, p. 433
Plant domestication | Retrotransposon abundance | Helianthus annuus | Retrotransposon proximity to genes | Long terminal repeat retrotransposons | Life Sciences & Biomedicine | Genetics & Heredity | Science & Technology | Haplotypes | Enzymes | Seeds | Copy number | Genes | Phenotypic variations | Domestication | Abundance | Genomes | Biosynthesis | Fatty acids | Epigenetics | Evolution | Trends | Sulfur | Chromosomes | Genotypes | Deoxyribonucleic acid--DNA | Cultivars | Polymorphism | long terminal repeat retrotransposons | plant domestication | retrotransposon proximity to genes | retrotransposon abundance
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8. Full Text Identification and characterisation of Short Interspersed Nuclear Elements in the olive tree (Olea europaea L.) genome
by Barghini, Elena and Barghini, Elena and Mascagni, Flavia and Mascagni, Flavia and Natali, Lucia and Natali, Lucia and Giordani, Tommaso and Giordani, Tommaso and Cavallini, Andrea and Cavallini, Andrea
Molecular genetics and genomics : MGG, ISSN 1617-4615, 2/2017, Volume 292, Issue 1, pp. 53 - 61
Life Sciences | Biochemistry, general | Olive | Non-LTR retroelements | SINEs | Microbial Genetics and Genomics | Illumina sequencing | SINE Finder | Cell Biology | Plant Genetics & Genomics | Animal Genetics and Genomics | Biochemistry & Molecular Biology | Genetics & Heredity | Life Sciences & Biomedicine | Science & Technology | Short Interspersed Nucleotide Elements | Olea - genetics | Phylogeny | Sequence Analysis, DNA | DNA, Plant - genetics | Computational Biology | Index Medicus
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9. Full Text On the Trail of Tetu1: Genome-Wide Discovery of CACTA Transposable Elements in Sunflower Genome
by Ventimiglia, Maria and Pugliesi, Claudio and Vangelisti, Alberto and Usai, Gabriele and Giordani, Tommaso and Natali, Lucia and Cavallini, Andrea and Mascagni, Flavia
International journal of molecular sciences, ISSN 1422-0067, 03/2020, Volume 21, Issue 6, p. 2021
Biochemistry & Molecular Biology | Physical Sciences | Chemistry | Life Sciences & Biomedicine | Chemistry, Multidisciplinary | Science & Technology | Plant Proteins - genetics | Phenotype | Genes, Plant - genetics | Retroelements | Transposases - genetics | DNA Transposable Elements - genetics | Conserved Sequence | Repetitive Sequences, Nucleic Acid | Genome, Plant | Flowers - genetics | DNA, Plant - genetics | Helianthus - genetics | Transposons | Wildlife conservation | Genomes | Gene expression | Subgroups | Gene sequencing | Mutants | Conserved sequence | Turf | Classification | Phylogenetics | Flowers & plants | Bioinformatics | Sunflowers | Deoxyribonucleic acid--DNA | Index Medicus | cacta classification | cacta | class ii transposons | sunflower
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10. Full Text How an ancient, salt-tolerant fruit crop, Ficus carica L., copes with salinity: a transcriptome analysis
by Vangelisti, Alberto and Zambrano, Liceth Solorzano and Caruso, Giovanni and Macheda, Desiré and Bernardi, Rodolfo and Usai, Gabriele and Mascagni, Flavia and Giordani, Tommaso and Gucci, Riccardo and Cavallini, Andrea and Natali, Lucia
Scientific reports, ISSN 2045-2322, 12/2019, Volume 9, Issue 1, pp. 2561 - 2561
Science & Technology - Other Topics | Multidisciplinary Sciences | Science & Technology | Salt | Biotechnology | Transcription activation | Salinity effects | Genomes | Ribonucleic acid--RNA | Gene expression | Sodium chloride | Salinity tolerance | Genotypes | Fruits | Salinity | Index Medicus
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11. Full Text Interspecific hybridisation and LTR-retrotransposon mobilisation-related structural variation in plants: A case study
by Usai, Gabriele and Mascagni, Flavia and Vangelisti, Alberto and Giordani, Tommaso and Ceccarelli, Marilena and Cavallini, Andrea and Natali, Lucia
Genomics (San Diego, Calif.), ISSN 0888-7543, 03/2020, Volume 112, Issue 2, pp. 1611 - 1621
Poplar | Retrotransposon-related structural variation | Long-terminal-repeats retrotransposons | Retrotransposon transcription | Retrotransposon insertions | Interspecific hybrid | Genetics & Heredity | Life Sciences & Biomedicine | Biotechnology & Applied Microbiology | Science & Technology | Index Medicus
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