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by Thorsson, Vesteinn and Thorsson, Vésteinn and Gibbs, Richard A and Gibbs, David L and Brown, Scott D and Wolf, Gregory and Wolf, Denise and Bortone, Dante S and Ou Yang, Tai-Hsien and Porta-Pardo, Eduard and Gao, Galen F and Gao, Jianjiong and Plaisier, Christopher L and Eddy, James A and Ziv, Elad and Culhane, Aedin C and Paull, Evan O and Sivakumar, I.K. Ashok and Gentles, Andrew J and Malhotra, Raunaq and Farshidfar, Farshad and Colaprico, Antonio and Parker, Joel S and Mose, Lisle E and Vo, Nam Sy and Liu, Wenbin and Liu, Jianfang and Liu, Jia and Liu, Yuexin and Liu, Xiuping and Rader, Janet and Dhankani, Varsha and Reynolds, Sheila and Reynolds, Sheila M and Bowlby, Reanne and Califano, Andrea and Cherniack, Andrew D and Anastassiou, Dimitris and Bedognetti, Davide and Mokrab, Younes and Newman, Aaron M and Rao, Arvind and Chen, Amy and Chen, Chu and Chen, Ken and Krasnitz, Alexander and Hu, Jianhong and Hu, Hai and Malta, Tathiane M and Noushmehr, Houtan and Pedamallu, Chandra Sekhar and Bullman, Susan and Ojesina, Akinyemi I and Lamb, Andrew and Zhou, Wanding and Shen, Hui and Choueiri, Toni K and Weinstein, John N and Guinney, Justin and Saltz, Joel and Holt, Robert and Holt, Robert A and Rabkin, Charles S and Caesar-Johnson, Samantha J and Demchok, John A and Felau, Ina and Kasapi, Melpomeni and Ferguson, Martin L and Hutter, Carolyn M and Sofia, Heidi J and Tarnuzzer, Roy and Wang, Jioajiao and Wang, Min and Wang, Linghua and Wang, Zhining and Wang, Timothy and Wang, Jing and Yang, Ju Dong and Yang, Hannah and Yang, Liming and Yang, Ian and Zenklusen, Jean C and Zhang, Jiashan (Julia) and Zhang, Jiexin and Zhang, Lizhi and Zhang, Wei and Zhang, Hongzheng and Zhang, Hailei and Zhang, Hongxin and Chudamani, Sudha and Lolla, Laxmi and Naresh, Rashi and Pihl, Todd and Sun, Yichao and Sun, Qiang and Wan, Yunhu and Wu, Ye and Cho, Juok and DeFreitas, Timothy and Frazer, Scott and ... and Canc Genome Atlas Res Network and Cancer Genome Atlas Research Network
Immunity, ISSN 1074-7613, 04/2018, Volume 48, Issue 4, pp. 812 - 830.e14
We performed an extensive immunogenomic analysis of more than 10,000 tumors comprising 33 diverse cancer types by utilizing data compiled by TCGA. Across... 
tumor immunology | immunotherapy | cancer genomics | integrative network analysis | immuno-oncology | tumor microenvironment | immune subtypes | immunomodulatory | Immunology | Infectious Diseases | Immunology and Allergy | GENOMIC ANALYSES | INFORMATION | T-CELL-RECEPTOR | REGULATORY NETWORK | CLASSIFICATION | IMMUNOLOGY | SEQUENCING DATA | SOMATIC MUTATIONS | COMPREHENSIVE ANALYSIS | PREDICTION | REVEALS | Transforming Growth Factor beta - immunology | Prognosis | Humans | Middle Aged | Th1-Th2 Balance - physiology | Male | Neoplasms - classification | Wound Healing - immunology | Young Adult | Transforming Growth Factor beta - genetics | Neoplasms - genetics | Neoplasms - immunology | Interferon-gamma - immunology | Adolescent | Aged, 80 and over | Adult | Female | Aged | Interferon-gamma - genetics | Wound Healing - genetics | Genomics - methods | Child | Macrophages - immunology | Cell proliferation | Cluster analysis | Transcription | Copy number | p53 Protein | Lung cancer | Genomics | Aneuploidy | Lymphocytes T | Genomes | Cell interactions | Macrophages | Immunotherapy | DNA methylation | Deoxyribonucleic acid--DNA | Immune system | Medical research | Wound healing | Immunomodulation | MiRNA | Stockholders | Inflammation | T cell receptors | Communications networks | Gene expression | White blood cells | Inventors | Medical prognosis | γ-Interferon | Mutation | Cancer | Tumors | Immune Subtypes | Integrative Network Analysis | Cancer Genomics | Immuno-oncology | Tumor immunology
Journal Article
by Campbell, Joshua D and Yau, Christina and Bowlby, Reanne and Liu, Jia and Liu, Yuexin and Liu, Wenbin and Liu, Xiuping and Brennan, Kevin and Fan, Huihui and Fan, Cheng and Taylor, Alison M and Taylor, Barry S and Wang, Jioajiao and Wang, Min and Wang, Jing and Wang, Timothy and Wang, Zhining and Wang, Chen and Wang, Linghua and Walter, Vonn and Akbani, Rehan and Byers, Lauren Averett and Creighton, Chad J and Coarfa, Cristian and Shih, Juliann and Cherniack, Andrew D and Gevaert, Olivier and Prunello, Marcos and Shen, Ronglei and Shen, Hui and Anur, Pavana and Chen, Jianhong and Chen, Zhong and Chen, Ting-Wen and Chen, Amy and Chen, Chu and Cheng, Feixiong and Cheng, Hui and Hayes, D. Neil and Bullman, Susan and Pedamallu, Chandra Sekhar and Ojesina, Akinyemi I and Sadeghi, Sara and Mungall, Karen L and Mungall, Andrew J and Mungall, Karen and Robertson, A. Gordon and Benz, Christopher and Schultz, Andre and Schultz, Nikolaus and Kanchi, Rupa S and Gay, Carl M and Hegde, Apurva M and Hegde, Apurva and Diao, Lixia and Ma, Deqin and Ma, Wencai and Ma, Yussanne and Sumazin, Pavel and Chiu, Hua-Sheng and Gunaratne, Preethi and Donehower, Larry and Donehower, Lawrence A and Rader, Janet S and Zuna, Rosemary and Al-Ahmadie, Hikmat and Lazar, Alexander J and Flores, Elsa R and Tsai, Kenneth Y and Zhou, Jane H and Zhou, Wanding and Rustgi, Anil K and Drill, Esther and Wong, Tina and Wong, Christopher K and Caesar-Johnson, Samantha J and Demchok, John A and Felau, Ina and Kasapi, Melpomeni and Ferguson, Martin L and Hutter, Carolyn M and Sofia, Heidi J and Tarnuzzer, Roy and Yang, Ian and Yang, Liming and Yang, Ju Dong and Yang, Hannah and Zenklusen, Jean C and Zhang, Jiashan (Julia) and Zhang, Hailei and Zhang, Lizhi and Zhang, Hongzheng and Zhang, Wei and Zhang, Hongxin and Zhang, Jiexin and Chudamani, Sudha and Lolla, Laxmi and Naresh, Rashi and Pihl, Todd and Sun, Yichao and ... and Canc Genome Atlas Res Network and Cancer Genome Atlas Research Network and Argonne National Lab. (ANL), Argonne, IL (United States). Advanced Photon Source (APS)
Cell Reports, ISSN 2211-1247, 04/2018, Volume 23, Issue 1, pp. 194 - 212.e6
Journal Article
by Dennis, Martin and Mead, Gillian and Mead, Denise and Forbes, John and Graham, Julie and Graham, Susan and Graham, Libby and Graham, Catriona and Hackett, Maree and Hankey, Graeme J and House, Allan and Lewis, Stephanie and Lundström, Erik and Sandercock, Peter and Innes, Karen and Williams, Carol and Williams, Sandra and Williams, Rhys and Williams, Richard and Williams, Rebecca and Williams, Max and Williams, Sarah and Drever, Jonathan and Mcgrath, Aileen and Deary, Ann and Fraser, Greig and Fraser, Ruth and Anderson, Rosemary and Walker, Rachel and Walker, Elaine and Walker, Pauli and Walker, Susannah and Perry, David and Perry, Jack and Mcgill, Connor and Buchanan, David and Chun, Yvonne and Dinsmore, Lynn and Maschauer, Emma and Barugh, Amanda and Mikhail, Shadia and Blair, Gordon and Hoeritzauer, Ingrid and Scott, Jon and Scott, Rhona and Scott, Maggie and Lawrence, Tara and Lawrence, Katherine and Shaw, Alison and Williamson, Sue and Williamson, Judith and Burgess, David and Burgess, Seona and Burgess, Laura and Macleod, Fiona and Macleod, Malcolm and Macleod, Mary Joan and Morales, Dan and Sullivan, Frank and Brady, Marian and French, Ray and Van Wijck, Frederike and Watkins, Caroline and Proudfoot, Fiona and Skwarski, Joanna and Mcgowan, Diane and Murphy, Peter and Murphy, Rachael and Rutherford, William and Mccormick, Katrina and Buchan, Ruaridh and Macraild, Allan and Paulton, Ruth and Fazal, Adnan and Taylor, Vicky and Taylor, Caroline and Taylor, Pat and Parakramawansha, Ruwan and Hunter, Neil and Hunter, Nadia and Bamford, Elizabeth and Bamford, John and Waugh, Darren and Waugh, Dean and Veraque, Emelda and Bedford, Caroline and Bedford, Elizabeth and Kambafwile, Mary and Idrovo, Luis and Makawa, Linetty and Smalley, Paula and Randall, Marc and Thirugnana-Chandran, Tharani and Hassan, Hanna and Hassan, Muhammad and Hassan, Ahamad and Vowden, Richard and Jackson, Samantha and Jackson, Tracy and Jackson, Linda and ... and FOCUS Trial Collaboration and Medicinska fakulteten and Medicinska och farmaceutiska vetenskapsområdet and Neurologi and Uppsala universitet and Institutionen för neurovetenskap
The Lancet, ISSN 0140-6736, 01/2019, Volume 393, Issue 10168, pp. 265 - 274
Journal Article