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1. Full Text Proteogenomics connects somatic mutations to signalling in breast cancer
by Mertins, Philipp and Mani, D.R and Ruggles, Kelly V and Gillette, Michael A and Clauser, Karl R and Wang, Pei and Wang, Xianlong and Qiao, Jana W and Cao, Song and Petralia, Francesca and Kawaler, Emily and Mundt, Filip and Krug, Karsten and Tu, Zhidong and Lei, Jonathan T and Gatza, Michael L and Wilkerson, Matthew and Perou, Charles M and Yellapantula, Venkata and Huang, Kuan-Lin and Lin, Chenwei and McLellan, Michael D and Yan, Ping and Davies, Sherri R and Townsend, R. Reid and Skates, Steven J and Wang, Jing and Zhang, Bing and Kinsinger, Christopher R and Mesri, Mehdi and Rodriguez, Henry and Ding, Li and Paulovich, Amanda G and Fenyö, David and Ellis, Matthew J and Carr, Steven A and NCI CPTAC
Nature (London), ISSN 0028-0836, 05/2016, Volume 534, Issue 7605, pp. 55 - 62
Science & Technology - Other Topics | Multidisciplinary Sciences | Science & Technology | Protein Kinases - metabolism | Focal Adhesion Kinase 1 - genetics | Receptor, Epidermal Growth Factor - genetics | Protein Kinases - genetics | Cyclin-Dependent Kinases - metabolism | Receptor, ErbB-2 - genetics | Receptors, G-Protein-Coupled - metabolism | Genomics | Humans | Gene Expression Regulation, Neoplastic | Receptor, ErbB-2 - metabolism | Phosphoproteins - metabolism | Receptor-Interacting Protein Serine-Threonine Kinase 2 - genetics | Tumor Suppressor Protein p53 - genetics | Breast Neoplasms - metabolism | Receptor-Interacting Protein Serine-Threonine Kinase 2 - metabolism | Breast Neoplasms - enzymology | Receptor, Epidermal Growth Factor - metabolism | Phosphoproteins - analysis | Mass Spectrometry | src-Family Kinases - metabolism | Female | Cyclin-Dependent Kinases - genetics | Focal Adhesion Kinase 1 - metabolism | Chromosomes, Human, Pair 5 - genetics | Breast Neoplasms - classification | Chromosome Deletion | p21-Activated Kinases - genetics | Signal Transduction | Molecular Sequence Annotation | Calcium-Binding Proteins - deficiency | Phosphoproteins - genetics | Mutation - genetics | S-Phase Kinase-Associated Proteins - metabolism | p21-Activated Kinases - metabolism | Phosphatidylinositol 3-Kinases - genetics | Breast Neoplasms - genetics | Class I Phosphatidylinositol 3-Kinases | Proteomics | S-Phase Kinase-Associated Proteins - genetics | Receptors, G-Protein-Coupled - genetics | src-Family Kinases - genetics | Calcium-Binding Proteins - genetics | Breast cancer | Genetic aspects | Research | Oncology, Experimental | Cancer | Physiological aspects | Methods | Mutation (Biology) | Proteins | Gene amplification | Peptides | Protein expression | Genomes | Mutation | Kinases | Deoxyribonucleic acid--DNA | Tumors | Index Medicus | Medicin och hälsovetenskap
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2. Full Text Advances in Proteomic Technologies and Its Contribution to the Field of Cancer
by Mesri, Mehdi
Advances in medicine, ISSN 2356-6752, 9/2014, Volume 2014, pp. 238045 - 25
Review
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3. Full Text Causes and Rates of Natural Sudden Unexpected Deaths in Tehran: A Five-Year Study
by Mehdi FOROUZESH and Mehdi MESRI and Masoud GHADIPASHA and Alimohammad ALIMOHAMMADI and Samira ARAM and Seyed Hassan SAADAT and Seyed Morteza HOSSEINI
Journal of international translational medicine, ISSN 2227-6394, 09/2019, Volume 7, Issue 3, pp. 99 - 102
Unexpected | Sudden death | Rate | Cause | Tehran
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4. Full Text Multi-site assessment of the precision and reproducibility of multiple reaction monitoring-based measurements of proteins in plasma
by Rudnick, Paul A and Niles, Richard K and Vega-Montoto, Lorenzo J and Mani, D R and Abbatiello, Susan E and Tegeler, Tony J and Tempst, Paul and Gibson, Bradford W and Cusack, Michael P and Buck, Charles and Hall, Steven C and Neubert, Thomas A and Mesri, Mehdi and Tabb, David L and Johansen, Eric B and Ransohoff, David and Addona, Terri A and Bunk, David M and Hiltke, Tara and Zhao, Lei and Schilling, Birgit and Regnier, Fred E and Rodriguez, Henry and Liebler, Daniel C and Wahlander, Åsa and Ham, Amy-Joan L and Dodder, Nathan G and Spiegelman, Clifford H and Carr, Steven A and Li, Jing and Allen, Simon and Variyath, Asokan M and Waldemarson, Sofia and Smith, Derek and Jackson, Angela and Borchers, Christoph H and Anderson, N Leigh and Wang, Mu and Keshishian, Hasmik and Fisher, Susan J and Held, Jason M and Pulsipher, Trenton C and Blackman, Ronald K and Skates, Steven J and Whiteaker, Jeffrey R and Zimmerman, Lisa J and Cardasis, Helene L and Kinsinger, Christopher R and Paulovich, Amanda G
Nature biotechnology, ISSN 1087-0156, 07/2009, Volume 27, Issue 7, pp. 633 - 641
Life Sciences & Biomedicine | Biotechnology & Applied Microbiology | Science & Technology | Fundamental and applied biological sciences. Psychology | Biotechnology | Biological and medical sciences | Blood Chemical Analysis - methods | Blood Proteins - analysis | Mass Spectrometry - standards | Reproducibility of Results | Humans | Sensitivity and Specificity | Linear Models | Biomarkers - blood | Proteome - analysis | Mass Spectrometry - methods | Technology Assessment, Biomedical | Infants (Newborn) | Usage | Research | Diagnosis | Biological markers | Health aspects | Mass spectrometry | Blood proteins | Diseases | Proteins | Biomarkers | Plasma | Innovations | Index Medicus
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5. Full Text Update on New Therapies of Diabetic Foot Ulcers: A Systematic Review
by Vahid ABOLGHASEMI and Mehdi MESRI
Journal of international translational medicine, ISSN 2227-6394, 04/2019, Volume 7, Issue 1, pp. 61 - 64
Treatment | Clinicians | Diabetic foot ulcers | Diabetes mellitus
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6. Full Text Proteome profiling outperforms transcriptome profiling for coexpression based gene function prediction
by Wang, Jing and Ma, Zihao and Carr, Steven A and Mertins, Philipp and Zhang, Hui and Zhang, Zhen and Chan, Daniel W and Ellis, Matthew J. C and Townsend, R. Reid and Smith, Richard D and McDermott, Jason E and Chen, Xian and Paulovich, Amanda G and Boja, Emily S and Mesri, Mehdi and Kinsinger, Christopher R and Rodriguez, Henry and Rodland, Karin D and Lieblerc, Daniel C and Zhang, Bing and Pacific Northwest National Laboratory (PNNL), Richland, WA (US), Environmental Molecular Sciences Laboratory (EMSL)
Molecular & cellular proteomics, ISSN 1535-9476, 01/2017, Volume 16, Issue 1, pp. 121 - 134
Biochemistry & Molecular Biology | Life Sciences & Biomedicine | Biochemical Research Methods | Science & Technology | Neoplasms - metabolism | Oligonucleotide Array Sequence Analysis | Humans | Gene Expression Regulation, Neoplastic | Gene Expression Profiling - methods | Chromosome Mapping | Gene Regulatory Networks | Protein Interaction Maps | Algorithms | Neoplasms - genetics | Mass Spectrometry | Epithelial-Mesenchymal Transition | Proteomics - methods | Web Browser | Networks | Profiling | Mesenchyme | Genes | Modules | Data processing | Mass spectroscopy | Breast cancer | Genomes | Gene expression | ErbB-2 protein | Biological activity | Consortia | Proteins | Wiring | Complement activation | Proteomics | Mass spectrometry | Cancer | Index Medicus | Environmental Molecular Sciences Laboratory | BASIC BIOLOGICAL SCIENCES | Research
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7. Full Text Proteogenomic integration reveals therapeutic targets in breast cancer xenografts
by Huang, Kuan-Lin and Li, Shunqiang and Mertins, Philipp and Cao, Song and Gunawardena, Harsha P and Ruggles, Kelly V and Mani, D.R and Clauser, Karl R and Tanioka, Maki and Usary, Jerry and Kavuri, Shyam M and Xie, Ling and Yoon, Christopher and Qiao, Jana W and Wrobel, John and Wyczalkowski, Matthew A and Erdmann-Gilmore, Petra and Snider, Jacqueline E and Hoog, Jeremy and Singh, Purba and Niu, Beifung and Guo, Zhanfang and Sun, Sam Qiancheng and Sanati, Souzan and Kawaler, Emily and Wang, Xuya and Scott, Adam and Ye, Kai and McLellan, Michael D and Wendl, Michael C and Malovannaya, Anna and Held, Jason M and Gillette, Michael A and Fenyö, David and Kinsinger, Christopher R and Mesri, Mehdi and Rodriguez, Henry and Davies, Sherri R and Perou, Charles M and Ma, Cynthia and Reid Townsend, R and Chen, Xian and Carr, Steven A and Ellis, Matthew J and Ding, Li
Nature communications, ISSN 2041-1723, 03/2017, Volume 8, Issue 1, pp. 14864 - 14864
Science & Technology - Other Topics | Multidisciplinary Sciences | Science & Technology | Breast Neoplasms - therapy | Xenograft Model Antitumor Assays | Phosphorylation | Animals | Breast Neoplasms - genetics | Proteogenomics | Signal Transduction | Humans | Female | Mice | Transcriptome - genetics | Molecular Targeted Therapy | Index Medicus
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8. Full Text Accelerated rigor mortis: A case letter
by Mesri, Mehdi and Behzadnia, MohammadJavad and Dorooshi, Gholamali
Journal of research in medical sciences, ISSN 1735-1995, 1/2017, Volume 22, Issue 1, pp. 126 - 126
Medicine, General & Internal | Life Sciences & Biomedicine | General & Internal Medicine | Science & Technology | Medicine | Toxicology | Emergency medical care | Forensic pathology | Funeral homes | Adenosine triphosphate
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9. Full Text CPTAC Assay Portal: A repository of targeted proteomic assays
by Whiteaker, Jeffrey R and Halusa, Goran N and Hoofnagle, Andrew N and Sharma, Vagisha and MacLean, Brendan and Yan, Ping and Wrobel, John A and Kennedy, Jacob and Mani, D.R and Zimmerman, Lisa J and Meyer, Matthew R and Mesri, Mehdi and Rodriguez, Henry and Paulovich, Amanda G and Abbatiello, Susan E and Boja, Emily and Carr, Steven A and Chan, Daniel W and Chen, Xian and Chen, Jing and Davies, Sherri R and Ellis, Matthew J. C and Fenyö, David and Hiltke, Tara and Ketchum, Karen A and Kinsinger, Chris and Kuhn, Eric and Liebler, Daniel C and Lin, De and Liu, Tao and Loss, Michael and MacCoss, Michael J and Qian, Wei-Jun and Rivers, Robert and Rodland, Karin D and Ruggles, Kelly V and Scott, Mitchell G and Smith, Richard D and Thomas, Stefani and Townsend, R. Reid and Whiteley, Gordon and Wu, Chaochao and Zhang, Hui and Zhang, Zhen and CPTAC and Clinical Proteomic Tumor Analysis Consortium (CPTAC) and the Clinical Proteomic Tumor Analysis Consortium (CPTAC)
Nature methods, ISSN 1548-7091, 2014, Volume 11, Issue 7, pp. 703 - 704
Biochemistry & Molecular Biology | Life Sciences & Biomedicine | Biochemical Research Methods | Science & Technology | Neoplasm Proteins - analysis | Neoplasm Proteins - chemistry | Proteomics - methods | Databases, Protein | Humans | Mass Spectrometry | Usage | Assaying | Mass spectrometry | Analysis | Methods | Proteomics | Index Medicus
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10. Full Text Leukocyte Microparticles Stimulate Endothelial Cell Cytokine Release and Tissue Factor Induction in a JNK1 Signaling Pathway
by Mehdi Mesri and Dario C. Altieri
The Journal of biological chemistry, ISSN 0021-9258, 08/1999, Volume 274, Issue 33, pp. 23111 - 23118
Life Sciences & Biomedicine | Biochemistry & Molecular Biology | Science & Technology | Endothelium, Vascular - cytology | Mitogen-Activated Protein Kinases | Signal Transduction | Humans | Cells, Cultured | Neutrophils - ultrastructure | DNA Primers | Inflammation - metabolism | Endothelium, Vascular - metabolism | Base Sequence | Coagulants - metabolism | JNK Mitogen-Activated Protein Kinases | Chemokine CCL2 - metabolism | Interleukin-6 - metabolism | Neutrophils - metabolism | Thromboplastin - biosynthesis | Calcium-Calmodulin-Dependent Protein Kinases - metabolism | Index Medicus
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