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Annual Review of Biophysics, ISSN 1936-122X, 5/2017, Volume 46, Issue 1, pp. 483 - 503
Journal Article
PLoS Computational Biology, ISSN 1553-734X, 12/2015, Volume 11, Issue 12
  Computational prediction of nucleic acid binding sites in proteins are necessary to disentangle functional mechanisms in most biological processes and to... 
Datasets | Proteins | Accuracy | Bias | Binding sites | Deoxyribonucleic acid--DNA | Methods
Journal Article
Scientific Reports, ISSN 2045-2322, 11/2016, Volume 6, Issue 1, p. 37024
Protein side-chain conformation is closely related to their biological functions. The side-chain prediction is a key step in protein design, protein docking... 
SYSTEM | CASP | MULTIDISCIPLINARY SCIENCES | ROTAMER LIBRARY | PACKING | BACKBONE | STRUCTURE PREDICTION | RNA-PUZZLES | Proteins | Gene polymorphism | Protein structure
Journal Article
Methods in Molecular Biology, ISSN 1064-3745, 2018, Volume 1762, pp. 233 - 243
Protein-ligand docking is a powerful method in drug discovery. The reliability of docking can be quantified by RMSD between a docking structure and an... 
Protein–ligand docking | Scoring function | Cyscore | Binding pocket | CurvatureSurface | Computational Biology - methods | Databases, Protein | Models, Molecular | Protein Binding | Ligands | Molecular Docking Simulation | Software | Proteins - chemistry | Binding Sites
Journal Article
Biochemical and Biophysical Research Communications, ISSN 0006-291X, 09/2019, Volume 517, Issue 2, pp. 346 - 352
Interleukin (IL)-15 is an important regulator of adipogenic differentiation of bone marrow-derived mesenchymal stem cells (BMSCs). This study was designed to... 
Adipogenic differentiation | STAT pathway | Interleukin-15 | Akt signalling | Mesenchymal stem cells | Type 2 diabetes | Interleukins | RNA | Cattle | Stem cells | Genetic transcription | Fatty acids | Protein binding
Journal Article
Nature, ISSN 0028-0836, 05/2018, Volume 557, Issue 7703, pp. 43 - 49
Journal Article
Nature Methods, ISSN 1548-7091, 01/2019, Volume 16, Issue 1, pp. 43 - 49
Single-cell transcriptomics is a versatile tool for exploring heterogeneous cell populations, but as with all genomics experiments, batch effects can hamper... 
PROGRAMS | PACKAGE | BIOCHEMICAL RESEARCH METHODS | GENE-EXPRESSION | NORMALIZATION | SEQUENCING DATA | FATE | Biological effects | Integration | Populations | Nearest-neighbor | Data integration | Variability | Peripheral blood mononuclear cells | Inspection | Data processing | Leukocytes (mononuclear) | Ribonucleic acid--RNA
Journal Article
Nucleic acids research, ISSN 0305-1048, 07/2016, Volume 44, Issue 1, pp. W562 - W567
RBscore&NBench combines a web server, RBscore and a database, NBench. RBscore predicts RNA/DNA-binding residues in proteins and visualizes the prediction... 
RNA | DATA-BANK | DNA | BIOCHEMISTRY & MOLECULAR BIOLOGY | SEQUENCE | SITES | GENERATION | ELECTROSTATICS | PROTEINS | SIDE-CHAIN CONFORMATIONS | FEATURES | DNA - chemistry | Datasets as Topic | Probability | Benchmarking | Software | Internet | Proteins - chemistry | RNA - chemistry | Binding Sites | Databases, Factual | Life Sciences | Molecular biology | Biochemistry, Molecular Biology | Web Server issue
Journal Article